Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPDYA

Gene Name Gene ID Reads Annotation
SPDYA ENSGALG00000017392 503 speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]











Genes with expression patterns similar to SPDYA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPDYA ENSGALG00000017392 503 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
2. FBF1 ENSGALG00000002179 1738 1 - - - - - - - 1.000 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
3. ZNF319 ENSGALG00000000999 1272 1 - - - - - - - 1.000 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
4. ELAVL4 ENSGALG00000010533 4978 1 - - - - - - - 1.000 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
5. PDCD6IP ENSGALG00000033500 580 1 - - - - - - - 1.000 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
6. ATP2B4 ENSGALG00000003601 3746 1 - - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
7. ENSGALG00000012250 ENSGALG00000012250 581 1 - - - - - - - 1.000 - -
8. PIGL ENSGALG00000004492 669 1 - - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
9. RNF168 ENSGALG00000006392 507 1 - - - - - - - 1.000 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
10. RFT1 ENSGALG00000001945 2446 0.999 - - - - - - - 0.999 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
11. SLC35D1 ENSGALG00000011121 4456 0.999 - - - - - - - 0.999 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
12. SNIP1 ENSGALG00000002010 1429 0.999 - - - - - - - 0.999 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
13. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
14. RAI2 ENSGALG00000016538 1074 0.998 - - - - - - - 0.998 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
15. RNFT1 ENSGALG00000005205 2888 0.998 - - - - - - - 0.998 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
16. ALS2 ENSGALG00000008415 2576 0.998 - - - - - - - 0.998 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
17. TMEM192 ENSGALG00000009528 2428 0.997 - - - - - - - 0.997 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
18. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
19. PMP22 ENSGALG00000031425 5358 0.996 - - - - - - - 0.996 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
20. CENPL ENSGALG00000038411 4867 0.996 - - - - - - - 0.996 - - centromere protein L [Source:NCBI gene;Acc:426563]
21. C6ORF192 C6ORF192 4224 0.996 - - - - - - - 0.996 - -
22. ATE1 ENSGALG00000009502 3751 0.995 - - - - - - - 0.995 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
23. MAP2K2 ENSGALG00000001267 3857 0.995 - - - - - - - 0.995 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
24. TMEM126A ENSGALG00000014066 6149 0.994 - - - - - - - 0.994 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
25. NBL1 ENSGALG00000040297 8165 0.994 - - - - - - - 0.994 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
26. FUNDC2 ENSGALG00000029585 9334 0.994 - - - - - - - 0.994 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
27. TTL ENSGALG00000008614 3991 0.993 - - - - - - - 0.993 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
28. CETN1 ENSGALG00000026741 7243 0.993 - - - - - - - 0.993 - - centrin 1 [Source:NCBI gene;Acc:422668]
29. IFNAR2 ENSGALG00000041867 1596 0.993 - - - - - - - 0.993 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
30. RCOR3 ENSGALG00000009871 7022 0.992 - - - - - - - 0.992 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
31. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
32. CDCA7 ENSGALG00000040833 7484 0.99 - - - - - - - 0.990 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
33. YAF2 ENSGALG00000009540 8452 0.99 - - - - - - - 0.990 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
34. DLC1 ENSGALG00000013715 5297 0.99 - - - - - - - 0.990 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
35. CRNKL1 ENSGALG00000008429 7280 0.989 - - - - - - - 0.989 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
36. PPM1D ENSGALG00000035610 6530 0.987 - - - - - - - 0.987 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
37. G3BP2 ENSGALG00000010882 21129 0.986 - - - - - - - 0.986 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
38. RBM7 ENSGALG00000007017 8779 0.986 - - - - - - - 0.986 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
39. gga-mir-6587 ENSGALG00000026386 9441 0.981 - - - - - - - 0.981 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
40. PDHB ENSGALG00000029576 12254 0.981 - - - - - - - 0.981 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
41. EXO1 ENSGALG00000010748 7572 0.98 - - - - - - - 0.980 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
42. JSC JSC 7982 0.975 - - - - - - - 0.975 - -
43. KIAA0196 KIAA0196 4011 0.971 - - - - - - - 0.971 - -
44. RFC3 ENSGALG00000017064 7011 0.971 - - - - - - - 0.971 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
45. XPO5 ENSGALG00000010341 24765 0.969 - - - - - - - 0.969 - - exportin 5 [Source:NCBI gene;Acc:421450]
46. NUP107 ENSGALG00000009934 2097 0.965 - - - - - - - 0.965 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
47. COX7A2L ENSGALG00000037996 13646 0.961 - - - - - - - 0.961 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
48. GARS ENSGALG00000005694 18264 0.96 - - - - - - - 0.960 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
49. INPP5A ENSGALG00000010493 6769 0.96 - - - - - - - 0.960 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
50. SBNO1 ENSGALG00000003392 6731 0.958 - - - - - - - 0.958 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
51. AP2B1 ENSGALG00000042125 13229 0.958 - - - - - - - 0.958 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
52. ANKRD11 ENSGALG00000006222 12327 0.957 - - - - - - - 0.957 - - ankyrin repeat domain 11, transcript variant X2
53. SFT2D1 ENSGALG00000020005 10855 0.957 - - - - - - - 0.957 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
54. TPD52 ENSGALG00000040167 9891 0.954 - - - - - - - 0.954 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
55. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
56. MRPL54 ENSGALG00000027611 39450 0.93 - - - - - - - 0.930 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
57. PRTG ENSGALG00000037336 34665 0.92 - - - - - - - 0.920 - - protogenin [Source:NCBI gene;Acc:415407]
58. PPA2 ENSGALG00000010582 22301 0.916 - - - - - - - 0.916 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
59. Sep-02_1 Sep-02_1 19203 0.915 - - - - - - - 0.915 - -
60. ENSGALG00000017396 ENSGALG00000017396 9028 0.908 - - - - - - - 0.908 - -
61. CHD4 ENSGALG00000013565 25695 0.907 - - - - - - - 0.907 - - chromodomain helicase DNA binding protein 4
62. ZOV3 ZOV3 3267 0.904 - - - - - - - 0.904 - -
63. CDC42EP4 ENSGALG00000023364 9240 0.902 - - - - - - - 0.902 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
64. FAM98A ENSGALG00000010428 9585 0.901 - - - - - - - 0.901 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
65. TNFAIP8L1 ENSGALG00000004266 12611 0.9 - - - - - - - 0.900 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
66. SLC25A39 ENSGALG00000042894 10654 0.899 - - - - - - - 0.899 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
67. LRPPRC ENSGALG00000009967 17091 0.874 - - - - - - - 0.874 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
68. ENSGALG00000023609 ENSGALG00000023609 6933 0.869 - - - - - - - 0.869 - -
69. ATP6V1G1 ENSGALG00000007190 82534 0.854 - - - - - - - 0.854 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
70. GNPDA1 ENSGALG00000040594 13 0.837 - - - - - - 0.837 - - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
71. PPFIBP2 ENSGALG00000005294 133 0.837 - - - - - - 0.837 - - - PPFIA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9250]
72. GTF2H5 ENSGALG00000013733 12293 0.835 - - - - - - - 0.835 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
73. TLR5 ENSGALG00000009392 28 0.83 - - - - - - 0.830 - - - toll like receptor 5 [Source:NCBI gene;Acc:554217]
74. KRT222 ENSGALG00000003859 53 0.812 - - - - - 0.812 - - - - keratin 222 [Source:NCBI gene;Acc:420046]
75. MAPK6 ENSGALG00000031448 28384 0.812 - - - - - - - 0.812 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
76. ABHD17A ENSGALG00000041163 5578 0.78 - - - - - - - 0.780 - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
77. BTBD10 ENSGALG00000005369 56 0.777 - - - - - 0.777 - - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
78. MRPS6 ENSGALG00000027579 8225 0.776 - - - - - - - 0.776 - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
79. TBC1D8 ENSGALG00000016776 42 0.772 - - - 0.772 - - - - - - TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]
80. FCF1 ENSGALG00000010275 24928 0.771 - - - - - - - 0.771 - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]
81. ADAP2 ENSGALG00000003319 134 0.768 - - - - - 0.768 - - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
82. CTDP1 ENSGALG00000031461 4818 0.764 - - - - - - - 0.764 - - CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]
83. SKAP2 ENSGALG00000030081 13746 0.759 - - - - - - - 0.759 - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
84. FASN ENSGALG00000040896 17372 0.756 - - - - - - - 0.756 - - fatty acid synthase [Source:NCBI gene;Acc:396061]
85. PLG ENSGALG00000004293 11 0.752 - - - 0.752 - - - - - - plasminogen
86. AGT ENSGALG00000011117 7 0.751 - - - 0.751 - - - - - - angiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]
87. AMBP ENSGALG00000030255 18 0.75 - - - 0.750 - - - - - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
88. BSPRY ENSGALG00000008861 98 0.749 - - - 0.749 - - - - - - B-box and SPRY domain containing [Source:HGNC Symbol;Acc:HGNC:18232]
89. EFCAB11 ENSGALG00000020402 16 0.747 - - - 0.747 - - - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
90. DUPD1 ENSGALG00000005019 18 0.747 - - - 0.747 - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
91. PPP2R2C ENSGALG00000015531 53 0.747 - - - 0.747 - - - - - - protein phosphatase 2 regulatory subunit Bgamma [Source:HGNC Symbol;Acc:HGNC:9306]
92. ADRA2C ENSGALG00000015608 42 0.747 - - - 0.747 - - - - - - adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
93. ENSGALG00000013327 ENSGALG00000013327 16 0.747 - - - 0.747 - - - - - -
94. ENPP7 ENSGALG00000013743 6 0.747 - - - 0.747 - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 7 [Source:HGNC Symbol;Acc:HGNC:23764]
95. ENSGALG00000008047 ENSGALG00000008047 13 0.747 - - - 0.747 - - - - - -
96. TRIP12 ENSGALG00000002929 11713 0.746 - - - - - - - 0.746 - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
97. CSF3 ENSGALG00000030907 11 0.744 - - - 0.744 - - - - - - colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
98. TM4SF1a ENSGALG00000028629 6 0.742 - - - 0.742 - - - - - - transmembrane 4 L six family member 1a [Source:NCBI gene;Acc:418999]
99. FBXW4 ENSGALG00000043428 300 0.74 - - - 0.740 - - - - - - F-box and WD repeat domain containing 4 [Source:HGNC Symbol;Acc:HGNC:10847]
100. MLST8 ENSGALG00000005878 8116 0.74 - - - - - - - 0.740 - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]

There are 49 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA