Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPDL1

Gene Name Gene ID Reads Annotation
SPDL1 ENSGALG00000001942 4403 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]











Genes with expression patterns similar to SPDL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPDL1 ENSGALG00000001942 4403 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
2. ARHGAP21 ENSGALG00000007721 3961 2.508 - - - - - - - 0.796 0.736 0.976 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
3. SMC4 ENSGALG00000009553 15715 2.507 - - 0.733 - - - 0.804 - - 0.970 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
4. FANCL ENSGALG00000030022 7423 2.413 - - - - - - 0.787 0.713 - 0.913 FA complementation group L [Source:NCBI gene;Acc:421202]
5. NUBP1 ENSGALG00000007241 3791 2.389 - - 0.822 - - - 0.729 - - 0.838 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
6. RBBP8 ENSGALG00000014982 3255 2.374 - - 0.729 - - - 0.770 - - 0.875 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
7. RPA3 ENSGALG00000010700 6212 2.277 - - - - - - 0.783 0.758 - 0.736 replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
8. SDF2L1 ENSGALG00000031982 6084 2.26 - - - - - - 0.710 0.738 - 0.812 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
9. WDR3 ENSGALG00000014791 5856 2.25 - - 0.741 - - - 0.782 0.727 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
10. HOXA5 ENSGALG00000025929 6231 2.24 - - - - - - 0.728 0.716 - 0.796 homeobox A5 [Source:NCBI gene;Acc:100858404]
11. CCNA2 ENSGALG00000011881 2574 1.821 - - 0.861 - - - - - - 0.960 cyclin A2 [Source:NCBI gene;Acc:396172]
12. WHSC1 1712 1.802 - - 0.835 - - - - - - 0.967 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
13. SLC30A5 ENSGALG00000014787 5573 1.795 - - - - - - 0.852 - - 0.943 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
14. HYAL3 ENSGALG00000029000 712 1.775 - - 0.805 - - - - - - 0.970 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
15. AGGF1 ENSGALG00000004311 3011 1.744 - - 0.773 - - - - - - 0.971 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
16. CNTRL ENSGALG00000001513 1773 1.743 - - 0.777 - - - - - - 0.966 centriolin [Source:NCBI gene;Acc:417121]
17. MRPL50 ENSGALG00000015543 11649 1.737 - - - - - - 0.769 - - 0.968 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
18. SLC39A6 ENSGALG00000013209 1754 1.729 - - 0.822 - - - - - - 0.907 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
19. NAA30 ENSGALG00000012098 4681 1.721 - - 0.842 - - - - - - 0.879 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
20. GGA.31975 GGA.31975 8825 1.72 - - - - - - 0.789 - - 0.931
21. FZD6 ENSGALG00000030626 3336 1.716 - - 0.804 - - - - - - 0.912 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
22. CKAP2 ENSGALG00000017025 25020 1.713 - - 0.764 - - - - - - 0.949 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
23. SLK ENSGALG00000008318 2220 1.713 - - 0.852 - - - - - - 0.861 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
24. UCHL3 ENSGALG00000016921 16208 1.711 - - - - - - 0.761 - - 0.950 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
25. SVIL ENSGALG00000007331 12032 1.706 - - - - - - 0.774 - - 0.932 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
26. CAMSAP1 ENSGALG00000001692 2617 1.704 - - 0.821 - - - - - - 0.883 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
27. ENSGALG00000009044 ENSGALG00000009044 14492 1.703 - - - - - - 0.740 - - 0.963
28. WBP4 ENSGALG00000016949 5858 1.697 - - 0.825 - - - - - - 0.872 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
29. PPFIA1 ENSGALG00000035774 5258 1.697 - - - - - - - 0.731 - 0.966 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
30. SSR2 ENSGALG00000000764 32190 1.695 - - - - - - - 0.735 - 0.960 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
31. SP3 ENSGALG00000031796 8997 1.691 - - 0.823 - - - - - - 0.868 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
32. ECI2 ENSGALG00000012809 3692 1.689 - - - - - - 0.749 - - 0.940 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
33. HDAC2 ENSGALG00000014991 23458 1.686 - - 0.749 - - - - - - 0.937 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
34. TIAR TIAR 2471 1.675 - - 0.833 - - - - - - 0.842
35. PRPF38B ENSGALG00000001972 2009 1.671 - - 0.779 - - - - - - 0.892 pre-mRNA processing factor 38B
36. RAD50 ENSGALG00000006794 4308 1.669 - - - - - - 0.722 - - 0.947 RAD50 double strand break repair protein, transcript variant X4
37. TPX2 ENSGALG00000006267 26087 1.668 - - 0.751 - - - - - - 0.917 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
38. KMT2C 6306 1.667 - - - - - - 0.737 - - 0.930 lysine methyltransferase 2C, transcript variant X14
39. CLSPN ENSGALG00000002346 2590 1.663 - - - - - - - 0.714 - 0.949 claspin [Source:NCBI gene;Acc:428223]
40. TRRAP ENSGALG00000003596 6032 1.662 - - - - - - 0.791 - - 0.871 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
41. GCSH ENSGALG00000032679 29231 1.659 - - - - - - - 0.744 - 0.915 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
42. DAP3 ENSGALG00000019796 13278 1.659 - - - - - - 0.751 - - 0.908 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
43. NUP85 ENSGALG00000007974 21249 1.657 - - - - - - 0.880 0.777 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
44. TWSG1 ENSGALG00000008400 1869 1.654 - - 0.776 - - - - - - 0.878 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
45. FECH ENSGALG00000038461 3491 1.654 - - 0.745 - - - - - - 0.909 ferrochelatase [Source:NCBI gene;Acc:374020]
46. ATP6V0C ENSGALG00000009229 125870 1.644 - - 0.709 - - - - - - 0.935 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
47. UBE2E3 ENSGALG00000020793 9517 1.644 - - 0.838 - - - - - - 0.806 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
48. ZC3H11A ENSGALG00000000541 2712 1.641 - - 0.876 - - - - - - 0.765 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
49. RPL26 RPL26 343071 1.639 - - 0.803 - - - - - - 0.836
50. DAD1 ENSGALG00000035626 32604 1.633 - - - - - - 0.771 0.862 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
51. HINT3 ENSGALG00000044342 5674 1.633 - - 0.844 - - - - 0.789 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
52. HDHD1 HDHD1 2928 1.633 - - - - - - - - 0.715 0.918
53. QSER1 ENSGALG00000012030 4490 1.63 - - 0.807 - - - - - - 0.823 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
54. QDPR ENSGALG00000030070 6953 1.627 - - 0.701 - - - - - - 0.926 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
55. FTD FTD 3041 1.623 - - 0.829 - - - - - - 0.794
56. CTSO ENSGALG00000009373 4186 1.623 - - - - - - 0.722 - - 0.901 cathepsin O [Source:NCBI gene;Acc:422410]
57. NDUFC2 ENSGALG00000029172 26136 1.622 - - 0.805 - - - 0.817 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
58. KIDINS220 ENSGALG00000016409 854 1.62 - - - - - - - - 0.770 0.850 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
59. HNRNPLL ENSGALG00000008504 14719 1.619 - - 0.793 - - - - - - 0.826 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
60. ABHD13 ENSGALG00000016853 4975 1.618 - - 0.876 - - - - 0.742 - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
61. FBXO5 ENSGALG00000013607 6156 1.616 - - - - - - 0.743 - - 0.873 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
62. HELLS ENSGALG00000005451 7094 1.616 - - - - - - - 0.764 - 0.852 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
63. RRP1B ENSGALG00000035696 12309 1.615 - - - - - - 0.802 0.813 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
64. NDC80 ENSGALG00000014801 3237 1.608 - - 0.787 - - - - - - 0.821 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
65. SMC5 ENSGALG00000015118 1799 1.607 - - 0.756 - - - - - - 0.851 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
66. PAK1IP1 ENSGALG00000012724 10907 1.606 - - - - - - - 0.758 - 0.848 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
67. WDR53 ENSGALG00000006395 4938 1.602 - - - - - - 0.717 - - 0.885 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
68. C11H16ORF80 C11H16ORF80 18673 1.6 - - - - - - 0.783 0.817 - -
69. RAB5C ENSGALG00000003359 5597 1.597 - - - - - - - 0.742 - 0.855 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
70. PRKACB ENSGALG00000028530 12506 1.595 - - 0.756 - - - - 0.839 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
71. PIGK ENSGALG00000009015 7942 1.594 - - 0.834 - - - 0.760 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
72. TMX3 ENSGALG00000013757 6387 1.593 - - - - - - 0.761 - - 0.832 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
73. RIN2 ENSGALG00000008457 2661 1.591 - - - - - - - 0.711 - 0.880 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
74. GTF2E1 ENSGALG00000042320 7712 1.589 - - 0.787 - - - - - - 0.802 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
75. PIGT ENSGALG00000003909 3804 1.586 - - - - - - 0.705 - - 0.881 phosphatidylinositol glycan anchor biosynthesis class T [Source:HGNC Symbol;Acc:HGNC:14938]
76. EAPP ENSGALG00000010007 5080 1.583 - - 0.792 - - - - - - 0.791 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
77. WASF1 ENSGALG00000015066 5628 1.582 - - - - - - 0.719 - - 0.863 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
78. HNRNPD ENSGALG00000011184 10686 1.579 - - - - - - 0.745 - - 0.834 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
79. CSRP2BP CSRP2BP 4679 1.578 - - - - - - - 0.805 - 0.773
80. DNAJC3 ENSGALG00000016894 9048 1.578 - - - - - - 0.820 - - 0.758 DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
81. BAG2 ENSGALG00000026605 3898 1.576 - - 0.759 - - - - - 0.817 - BCL2 associated athanogene 2
82. ZNF217 ZNF217 14511 1.573 - - - - - - - 0.766 - 0.807
83. UBN1 ENSGALG00000031416 2848 1.572 - - 0.798 - - - - - - 0.774 ubinuclein 1 [Source:NCBI gene;Acc:416398]
84. MARC1 ENSGALG00000009453 5675 1.568 - - 0.737 - - - 0.831 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
85. SMDT1 ENSGALG00000011897 9360 1.563 - - - - - - 0.761 - - 0.802 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
86. BPNT1 ENSGALG00000009576 7445 1.56 - - - - - - 0.732 0.828 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
87. ADRM1 ENSGALG00000005200 5417 1.557 - - - - - - 0.783 0.774 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
88. TDP2 ENSGALG00000013637 6595 1.557 - - 0.791 - - - - 0.766 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
89. ENSGALG00000014171 ENSGALG00000014171 10383 1.551 - - - - - - 0.717 - - 0.834
90. ERCC3 ENSGALG00000011515 3133 1.551 - - 0.831 - - - - 0.720 - - ERCC excision repair 3, TFIIH core complex helicase subunit [Source:NCBI gene;Acc:424226]
91. R3HDM1 ENSGALG00000012246 6580 1.549 - - - - - - 0.797 0.752 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
92. TMX4 ENSGALG00000028587 3513 1.548 - - - - - - - 0.716 - 0.832 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
93. VTA1 ENSGALG00000013810 4998 1.547 - - 0.721 - - - - 0.826 - - vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]
94. NR2C1 ENSGALG00000011327 5109 1.546 - - 0.809 - - - 0.737 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
95. NDUFA12 ENSGALG00000011325 19807 1.546 - - - - - - 0.779 0.767 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
96. MYCBP2 ENSGALG00000016915 2374 1.546 - - 0.791 - - - - - - 0.755 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
97. GPR162 ENSGALG00000022926 7181 1.539 - - - - - - - 0.733 - 0.806 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
98. CHRAC1 ENSGALG00000040823 5695 1.537 - - - - - - - 0.714 - 0.823 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
99. MSMO1 ENSGALG00000009560 6928 1.536 - - - - - - 0.776 0.760 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
100. TMEM167A ENSGALG00000027332 13862 1.534 - - 0.736 - - - 0.798 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]

There are 1336 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA