Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPDEF

Gene Name Gene ID Reads Annotation
SPDEF ENSG00000124664 3 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]



Genes with expression patterns similar to SPDEF

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. SPDEF ENSG00000124664 3 2 1.000 1.000 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
2. SPATA3-AS1 ENSG00000238062 1 1 - 1.000 SPATA3 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:28013]
3. RAB44 ENSG00000255587 1 1 - 1.000 RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
4. LOC100507387 5 1 - 1.000 uncharacterized LOC100507387
5. NAV2-AS5 ENSG00000255043 6 1 - 1.000 NAV2 antisense RNA 5 [Source:HGNC Symbol;Acc:HGNC:40740]
6. LOC101928844 5 1 1.000 - uncharacterized LOC101928844
7. CPNE6 ENSG00000100884, ENSG00000285221 1 1 - 1.000 copine 6 [Source:HGNC Symbol;Acc:HGNC:2319]
8. LOC286359 1 1 - 1.000 uncharacterized LOC286359
9. MROH7-TTC4 ENSG00000271723 1 0.99 - 0.990 MROH7-TTC4 readthrough (NMD candidate) [Source:HGNC Symbol;Acc:HGNC:49180]
10. PALM2-AKAP2 ENSG00000157654 3 0.95 - 0.950 PALM2-AKAP2 readthrough [Source:HGNC Symbol;Acc:HGNC:33529]
11. EPHA8 ENSG00000070886 10 0.917 - 0.917 EPH receptor A8 [Source:HGNC Symbol;Acc:HGNC:3391]
12. LOC100507346 1 0.896 - 0.896 uncharacterized LOC100507346
13. ADGRG3 ENSG00000182885 1 0.886 - 0.886 adhesion G protein-coupled receptor G3 [Source:HGNC Symbol;Acc:HGNC:13728]
14. LOC401557 1 0.858 - 0.858 uncharacterized LOC401557
15. CTAG2 ENSG00000126890 1 0.836 - 0.836 cancer/testis antigen 2 [Source:HGNC Symbol;Acc:HGNC:2492]
16. LINC01136 ENSG00000233791 3 0.808 - 0.808 long intergenic non-protein coding RNA 1136 [Source:HGNC Symbol;Acc:HGNC:49452]
17. OR56B4 ENSG00000180919 3 0.807 - 0.807 olfactory receptor family 56 subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:15248]
18. IL5RA ENSG00000091181 1 0.802 - 0.802 interleukin 5 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6017]
19. RTP4 ENSG00000136514 7 0.801 - 0.801 receptor transporter protein 4 [Source:HGNC Symbol;Acc:HGNC:23992]
20. NKX2-8 ENSG00000136327 62 0.793 - 0.793 NK2 homeobox 8 [Source:HGNC Symbol;Acc:HGNC:16364]
21. CYP1A2 ENSG00000140505 4 0.785 - 0.785 cytochrome P450 family 1 subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:2596]
22. ADGB ENSG00000118492 1 0.785 - 0.785 androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
23. LOC100507391 1 0.777 0.777 - uncharacterized LOC100507391
24. FPR1 ENSG00000171051 28 0.777 0.777 - formyl peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:3826]
25. CCDC38 ENSG00000165972 2 0.777 0.777 - coiled-coil domain containing 38 [Source:HGNC Symbol;Acc:HGNC:26843]
26. ADIPOQ-AS1 ENSG00000226482 6 0.777 0.777 - ADIPOQ antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40648]
27. GPR88 ENSG00000181656 5 0.777 0.777 - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
28. TSKS ENSG00000126467 1 0.777 0.777 - testis specific serine kinase substrate [Source:HGNC Symbol;Acc:HGNC:30719]
29. CCR2 ENSG00000121807 6 0.777 0.777 - C-C motif chemokine receptor 2 [Source:HGNC Symbol;Acc:HGNC:1603]
30. BEST1 ENSG00000167995 3 0.777 0.777 - bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
31. CACNG3 ENSG00000006116 5 0.777 0.777 - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:1407]
32. LOC100506700 6 0.777 0.777 - uncharacterized LOC100506700
33. FBXW12 ENSG00000164049 12 0.777 0.777 - F-box and WD repeat domain containing 12 [Source:HGNC Symbol;Acc:HGNC:20729]
34. PPP1R1B ENSG00000131771 2 0.777 0.777 - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
35. OR7A5 ENSG00000188269 4 0.777 0.777 - olfactory receptor family 7 subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:8368]
36. STBD1 ENSG00000118804 1 0.777 0.777 - starch binding domain 1 [Source:HGNC Symbol;Acc:HGNC:24854]
37. SYNC ENSG00000162520 1 0.777 0.777 - syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
38. SPINK8 ENSG00000229453 1 0.777 0.777 - serine peptidase inhibitor, Kazal type 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33160]
39. SLC35F4 ENSG00000151812 9 0.777 0.777 - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
40. OTOP3 ENSG00000182938 1 0.777 0.777 - otopetrin 3 [Source:HGNC Symbol;Acc:HGNC:19658]
41. GNA14-AS1 ENSG00000231373 1 0.777 0.777 - GNA14 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50451]
42. SNCB ENSG00000074317 1 0.777 0.777 - synuclein beta [Source:HGNC Symbol;Acc:HGNC:11140]
43. LOC101928944 2 0.777 0.777 - uncharacterized LOC101928944
44. C18orf32 ENSG00000177576 19 0.777 0.777 - chromosome 18 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:31690]
45. KCNAB1-AS1 ENSG00000242370 2 0.777 0.777 - KCNAB1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40316]
46. C5orf60 ENSG00000204661, ENSG00000284445 1 0.777 0.777 - chromosome 5 open reading frame 60 [Source:HGNC Symbol;Acc:HGNC:27753]
47. C9orf41-AS1 ENSG00000203321 12 0.758 - 0.758 C9orf41 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51188]
48. SPAG6 ENSG00000077327 26 0.743 - 0.743 sperm associated antigen 6 [Source:HGNC Symbol;Acc:HGNC:11215]
49. PLEKHM1P PLEKHM1P 8 0.721 - 0.721
50. TLR9 ENSG00000239732 6 0.721 - 0.721 toll like receptor 9 [Source:HGNC Symbol;Acc:HGNC:15633]
51. LINC00636 ENSG00000240423 8 0.72 - 0.720 long intergenic non-protein coding RNA 636 [Source:HGNC Symbol;Acc:HGNC:27702]
52. DGCR10 ENSG00000273164 5 0.708 - 0.708 DiGeorge syndrome critical region gene 10 [Source:HGNC Symbol;Acc:HGNC:17864]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA