Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPDEF

Gene Name Gene ID Reads Annotation
SPDEF ENSDARG00000029930 60 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]










Genes with expression patterns similar to SPDEF

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SPDEF ENSDARG00000029930 60 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
2. syne2a 63 3.237 0.706 0.876 - - - 0.929 0.726 - - spectrin repeat containing, nuclear envelope 2a
3. gabrr2b ENSDARG00000014057 9 2.86 - 0.940 - - - 0.920 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
4. CR677591.1 CR677591.1 19 2.77 - 0.911 - - - 0.920 0.939 - -
5. si:dkey-7a20.9 si:dkey-7a20.9 154 2.472 - 0.817 - - - 0.803 0.852 - -
6. si:ch211-165d12.4 ENSDARG00000079353 330 2.436 - 0.818 - - - 0.802 0.816 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
7. traf3ip1 ENSDARG00000010300 69 2.362 - 0.702 - - - 0.866 0.794 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
8. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 2.358 - 0.921 - - - 0.733 0.704 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
9. socs8 socs8 128 2.355 - 0.780 - - - 0.738 0.837 - -
10. smad6b ENSDARG00000031763 12 1.94 - 0.940 - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
11. PLEKHS1_2 PLEKHS1_2 21 1.92 - - - - - 0.920 1.000 - -
12. zgc:152977 ENSDARG00000077178 59 1.914 - 0.914 - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
13. oprk1 ENSDARG00000006894 43 1.865 - - - - - 0.889 0.976 - - opioid receptor, kappa 1 [Source:ZFIN;Acc:ZDB-GENE-030729-1]
14. exoc4 ENSDARG00000004336 32 1.853 - 0.933 - - - 0.920 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
15. si:dkey-7e14.3 ENSDARG00000086055 50 1.804 - - - - - 0.852 0.952 - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
16. ATP13A5 ATP13A5 13 1.787 - - - 0.787 - - 1.000 - -
17. slc46a3 ENSDARG00000077313 14 1.785 - 0.940 - - - - 0.845 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
18. tbx18 ENSDARG00000036930 390 1.781 - - - - - 0.823 0.958 - - T-box 18 [Source:ZFIN;Acc:ZDB-GENE-020529-2]
19. zgc:198419 ENSDARG00000076221 156 1.77 - - - - 0.915 0.855 - - - zgc:198419 [Source:ZFIN;Acc:ZDB-GENE-030131-7540]
20. si:ch211-241e1.5 ENSDARG00000008906 70 1.764 - 0.911 - - 0.853 - - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
21. fopnl ENSDARG00000071198 1002 1.76 - 0.940 - - - 0.820 - - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
22. grnas ENSDARG00000091885 71 1.737 - - - - 0.863 - 0.874 - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
23. CABZ01085657.1 CABZ01085657.1 23 1.737 - 0.817 - - - 0.920 - - -
24. XCR1_1 XCR1_1 187 1.736 0.866 - - - - 0.870 - - -
25. PPM1J ENSDARG00000074690 109 1.732 - 0.978 - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
26. ism2 ism2 153 1.71 - - - - - 0.841 0.869 - -
27. SDSL ENSDARG00000074698 34 1.698 - - - - - 0.920 0.778 - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
28. nalcn ENSDARG00000001835 294 1.697 - 0.889 - - 0.808 - - - - sodium leak channel, non-selective [Source:ZFIN;Acc:ZDB-GENE-050410-12]
29. CR847504.1 ENSDARG00000102515 29 1.691 - - - - - - 0.958 - 0.733
30. CR391977.3 CR391977.3 76 1.691 - - - - - 0.752 0.939 - -
31. CNNM2 CNNM2 225 1.685 0.798 - - - - 0.887 - - -
32. U2 U2 52 1.678 - 0.739 - - - - 0.939 - -
33. si:dkey-43f9.4 si:dkey-43f9.4 180 1.672 0.874 - - - - 0.798 - - -
34. CABZ01073654.1 CABZ01073654.1 16 1.664 0.748 - - - - - 0.916 - -
35. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.659 - 0.876 - - - - 0.783 - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
36. si:dkey-23a17.1 si:dkey-23a17.1 15 1.658 - 0.856 - - - 0.802 - - -
37. cyb5r2 ENSDARG00000051925 304 1.647 0.747 0.900 - - - - - - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
38. cyp46a1 cyp46a1 43 1.644 - 0.730 - - - - 0.914 - -
39. F7 ENSDARG00000034862 121 1.638 - 0.835 - - - - 0.803 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
40. si:dkey-225k4.1 ENSDARG00000092045 47 1.628 - - - - - 0.893 - 0.735 - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
41. zgc:172049 zgc:172049 175 1.616 - - - - 0.739 0.877 - - -
42. zgc:174273 zgc:174273 374 1.608 - - - - 0.866 0.742 - - -
43. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.606 0.816 0.790 - - - - - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
44. trim24 ENSDARG00000103350 431 1.604 - 0.798 - - - 0.806 - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
45. kcnt1 ENSDARG00000079484 45 1.587 - - - 0.793 - - 0.794 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
46. si:ch211-92l17.1 ENSDARG00000094584 18 1.585 - 0.779 - - - - 0.806 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
47. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.574 - 0.826 - - - - - - 0.748 FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
48. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.566 - 0.754 - - - - 0.812 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
49. dysf ENSDARG00000007370 125 1.558 - 0.837 - - - 0.721 - - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
50. camsap1b ENSDARG00000035122 492 1.551 - 0.807 - - - 0.744 - - - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
51. si:rp71-80o10.4 ENSDARG00000094316 279 1.548 0.777 - - - - 0.771 - - - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
52. arhgap29b ENSDARG00000017748 812 1.528 0.741 0.787 - - - - - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
53. CU469544.1 CU469544.1 219 1.516 - 0.758 - - - - 0.758 - -
54. ALPK1 195 1.515 - 0.778 - - - 0.737 - - - alpha-kinase 1
55. h2afy ENSDARG00000099329 286 1.513 0.749 0.764 - - - - - - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
56. gpr39 ENSDARG00000102888 46 1.513 - 0.746 - - - 0.767 - - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
57. si:ch73-95a24.1 si:ch73-95a24.1 11 1.503 - - 0.701 0.802 - - - - -
58. GIPR ENSDARG00000025478 87 1.493 - - - - - 0.743 0.750 - - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
59. si:ch211-76l23.6 si:ch211-76l23.6 68 1.488 - - - 0.787 - - 0.701 - -
60. kctd7 ENSDARG00000061580 44 1.474 - - - - - 0.714 0.760 - - potassium channel tetramerization domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060804-2]
61. slc25a18 ENSDARG00000070717 787 1.469 - - - - - 0.750 0.719 - - solute carrier family 25 (glutamate carrier), member 18 [Source:ZFIN;Acc:ZDB-GENE-041111-192]
62. C2H5orf22 C2H5orf22 196 1.427 - 0.707 - - - - 0.720 - -
63. SPAG9 ENSDARG00000078142 629 1.419 0.717 - - - - 0.702 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
64. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
65. lzts2b ENSDARG00000077207 22 1 - - - - - - 1.000 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
66. EP400 ENSDARG00000100965 45 1 - - - - - - 1.000 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
67. pkhd1l1 ENSDARG00000091116 23 1 - - - - - - 1.000 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
68. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
69. zgc:172133 ENSDARG00000075248 6 1 - - - - - - 1.000 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
70. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
71. pxn pxn 10 1 - - - - - - 1.000 - -
72. bdkrb1 ENSDARG00000020744 4 1 - - - - - - 1.000 - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
73. gcnt3 ENSDARG00000060471 37 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
74. PCDH10 PCDH10 7 1 - - - - - - 1.000 - -
75. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - - - - - 1.000 - -
76. cart1 ENSDARG00000070930 46 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
77. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - - 1.000 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
78. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
79. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
80. CELA1 CELA1 14 1 - - - - - - 1.000 - -
81. zgc:173443 ENSDARG00000034403 26 1 - - - - - - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
82. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 1 - - - - - - 1.000 - -
83. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
84. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
85. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
86. b3gat3 ENSDARG00000001939 58 1 - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
87. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
88. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
89. nanog ENSDARG00000075113 10 1 - - - - - - 1.000 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
90. grk7b ENSDARG00000055534 17 1 - - - - - - 1.000 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
91. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
92. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
93. avpr2aa ENSDARG00000007436 43 1 - - - - - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
94. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
95. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
96. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
97. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
98. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - 1.000 - -
99. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
100. grtp1b ENSDARG00000030269 24 1 - - - - - - 1.000 - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]

There are 1473 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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