Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SPARC

Gene Name Gene ID Reads Annotation
SPARC ENSGALG00000004184 36410 secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]











Genes with expression patterns similar to SPARC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SPARC ENSGALG00000004184 36410 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 secreted protein acidic and cysteine rich [Source:NCBI gene;Acc:386571]
2. COL1A2 ENSGALG00000009641 46236 3.179 - 0.732 0.796 0.805 0.846 - - - - - collagen type I alpha 2 chain [Source:NCBI gene;Acc:396243]
3. FKBP9 ENSGALG00000037669 12079 2.379 - - 0.744 - 0.739 - - 0.896 - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
4. MYL9 ENSGALG00000028567 36256 2.304 - - 0.720 - 0.794 - 0.790 - - - myosin, light chain 9, regulatory [Source:NCBI gene;Acc:396215]
5. TNRC18 ENSGALG00000040770 4061 1.671 - - - - - - 0.752 0.919 - - trinucleotide repeat containing 18 [Source:HGNC Symbol;Acc:HGNC:11962]
6. CDH5 ENSGALG00000032349 8526 1.671 - - - - 0.753 - - 0.918 - - cadherin 5 [Source:NCBI gene;Acc:374068]
7. SKP2 ENSGALG00000003547 14637 1.666 - - - - - - 0.715 0.951 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
8. SH3BGRL3 ENSGALG00000038536 18187 1.637 - - - - - - 0.768 0.869 - - SH3 domain binding glutamate rich protein like 3 [Source:NCBI gene;Acc:768795]
9. PSMG1 ENSGALG00000016062 7511 1.633 - - - - - - 0.725 0.908 - - proteasome assembly chaperone 1 [Source:NCBI gene;Acc:418520]
10. ESF1 ENSGALG00000034768 8610 1.627 - - - - - - 0.715 0.912 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
11. BAG2 ENSGALG00000026605 3898 1.627 - - - - - - 0.713 0.914 - - BCL2 associated athanogene 2
12. ACTN1 ENSGALG00000042458 10477 1.607 - - - - 0.821 - 0.786 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
13. MBTPS1 ENSGALG00000003293 4843 1.607 - - - - - - - 0.907 - 0.700 membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
14. EIF2B1 ENSGALG00000003259 9491 1.579 - - - - - - 0.703 0.876 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
15. S100A11 ENSGALG00000036711 23454 1.533 - - - 0.743 0.790 - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
16. COL5A2 ENSGALG00000031112 18358 1.527 - - 0.747 - - - 0.780 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
17. TAGLN ENSGALG00000011902 12030 1.506 - 0.734 - - 0.772 - - - - - transgelin [Source:NCBI gene;Acc:396490]
18. FN1 ENSGALG00000003578 37024 1.496 - - - 0.709 0.787 - - - - - fibronectin 1 [Source:NCBI gene;Acc:396133]
19. MDK ENSGALG00000008367 316136 1.493 - - 0.718 - 0.775 - - - - - midkine [Source:NCBI gene;Acc:423196]
20. C4H4ORF52 C4H4ORF52 8116 1.49 - - - - - - 0.754 0.736 - -
21. TGFBI ENSGALG00000029429 2306 1.482 - - - - 0.743 - 0.739 - - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
22. CTSO ENSGALG00000009373 4186 1.473 - - - - - - 0.728 0.745 - - cathepsin O [Source:NCBI gene;Acc:422410]
23. LIMD1 ENSGALG00000035623 7282 1.472 - - - - - - 0.747 - 0.725 - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
24. ACTG2 ENSGALG00000041634 4529 1.452 - 0.701 - - 0.751 - - - - - actin, gamma 2, smooth muscle, enteric [Source:NCBI gene;Acc:396084]
25. CSRP2 ENSGALG00000029921 6629 1.404 - 0.703 - - 0.701 - - - - - cysteine and glycine rich protein 2 [Source:NCBI gene;Acc:396128]
26. ATP1A1 ENSGALG00000032247 15898 0.963 - - - - - - - 0.963 - - ATPase Na+/K+ transporting subunit alpha 1 [Source:NCBI gene;Acc:396530]
27. TTC4 10377 0.947 - - - - - - - 0.947 - - tetratricopeptide repeat domain 4
28. CASC4 ENSGALG00000008208 8338 0.912 - - - - - - - 0.912 - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
29. CCNYL1 ENSGALG00000008485 11958 0.912 - - - - - - - 0.912 - - cyclin Y like 1
30. NUDC ENSGALG00000000895 17844 0.911 - - - - - - - 0.911 - - nuclear distribution C, dynein complex regulator [Source:NCBI gene;Acc:419578]
31. JMJD1C ENSGALG00000002942 4556 0.911 - - - - - - - 0.911 - - jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
32. TBC1D12 ENSGALG00000034044 5588 0.91 - - - - - - - 0.910 - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
33. KDM2B ENSGALG00000004225 11513 0.909 - - - - - - - 0.909 - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
34. PSMD5 ENSGALG00000001637 6812 0.909 - - - - - - - 0.909 - - proteasome 26S subunit, non-ATPase 5 [Source:NCBI gene;Acc:417125]
35. GPR89 GPR89 2253 0.908 - - - - - - - 0.908 - -
36. ADAM9 ENSGALG00000003398 1299 0.908 - - - - - - - 0.908 - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
37. LSM1 ENSGALG00000003245 4701 0.908 - - - - - - - 0.908 - - LSM1 homolog, mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:20472]
38. HIGD2A ENSGALG00000003348 34109 0.908 - - - - - - - 0.908 - - HIG1 hypoxia inducible domain family member 2A
39. NOP14 ENSGALG00000015649 7039 0.908 - - - - - - - 0.908 - - NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]
40. MTMR6 ENSGALG00000017112 2214 0.907 - - - - - - - 0.907 - - myotubularin related protein 6 [Source:HGNC Symbol;Acc:HGNC:7453]
41. DDX55 ENSGALG00000003298 2315 0.907 - - - - - - - 0.907 - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
42. SAFB ENSGALG00000013365 3175 0.907 - - - - - - - 0.907 - - scaffold attachment factor B, transcript variant X1
43. DISP1 3281 0.907 - - - - - - - 0.907 - - dispatched RND transporter family member 1, transcript variant X3
44. EXTL3 ENSGALG00000016630 1916 0.906 - - - - - - - 0.906 - - exostosin like glycosyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:3518]
45. PRMT7 ENSGALG00000038865 2666 0.906 - - - - - - - 0.906 - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
46. RPTOR ENSGALG00000034210 982 0.906 - - - - - - - 0.906 - - regulatory associated protein of MTOR complex 1 [Source:HGNC Symbol;Acc:HGNC:30287]
47. FBXO5 ENSGALG00000013607 6156 0.906 - - - - - - - 0.906 - - F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
48. Sep-11 Sep-11 2005 0.906 - - - - - - - 0.906 - -
49. LARP1B ENSGALG00000010207 2935 0.906 - - - - - - - 0.906 - - La ribonucleoprotein domain family member 1B [Source:HGNC Symbol;Acc:HGNC:24704]
50. ORC2 ENSGALG00000008234 3361 0.906 - - - - - - - 0.906 - - origin recognition complex subunit 2 [Source:NCBI gene;Acc:424077]
51. ENGASE ENSGALG00000011816 1763 0.905 - - - - - - - 0.905 - - endo-beta-N-acetylglucosaminidase [Source:HGNC Symbol;Acc:HGNC:24622]
52. PARL ENSGALG00000002315 15943 0.905 - - - - - - - 0.905 - - presenilin associated rhomboid like
53. PARP16 ENSGALG00000007365 9467 0.905 - - - - - - - 0.905 - - poly(ADP-ribose) polymerase family member 16 [Source:HGNC Symbol;Acc:HGNC:26040]
54. GOLGA2 ENSGALG00000004881 677 0.905 - - - - - - - 0.905 - - golgin A2, transcript variant X7
55. DAK DAK 13208 0.904 - - - - - - - 0.904 - -
56. CTPS1 ENSGALG00000042967 9532 0.904 - - - - - - - 0.904 - - CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]
57. DTD1 ENSGALG00000008808 10807 0.896 - - - - - - - 0.896 - - D-tyrosyl-tRNA deacylase 1 [Source:NCBI gene;Acc:416726]
58. ACO1 ENSGALG00000002162 6645 0.895 - - - - - - - 0.895 - - aconitase 1, soluble [Source:NCBI gene;Acc:373916]
59. MCM5 ENSGALG00000012546 18254 0.887 - - - - - - - 0.887 - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
60. BCCIP ENSGALG00000006617 13291 0.882 - - - - - - - 0.882 - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
61. CTNND2 ENSGALG00000013001 11217 0.878 - - - - - - - 0.878 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
62. SRSF6 ENSGALG00000000990 12424 0.871 - - - - - - - 0.871 - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
63. SF3A2 ENSGALG00000021679 12580 0.87 - - - - - - 0.870 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
64. FKBP10 ENSGALG00000025764 7668 0.87 - - - - - - 0.870 - - - FK506 binding protein 10 [Source:HGNC Symbol;Acc:HGNC:18169]
65. TAF3 ENSGALG00000006731 15569 0.857 - - - - - - - 0.857 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
66. THOC5 ENSGALG00000029223 16069 0.856 - - - - - - - 0.856 - - THO complex 5 [Source:NCBI gene;Acc:417019]
67. CD151 ENSGALG00000006856 5581 0.844 - - - - - - 0.844 - - - CD151 molecule (Raph blood group) [Source:NCBI gene;Acc:423105]
68. HDAC2 ENSGALG00000014991 23458 0.839 - - - - - - - 0.839 - - histone deacetylase 2 [Source:NCBI gene;Acc:395635]
69. SCCPDH ENSGALG00000010641 8624 0.838 - - - - - - 0.838 - - - saccharopine dehydrogenase (putative) [Source:NCBI gene;Acc:421485]
70. ENSGALG00000001398 ENSGALG00000001398 3248 0.835 - - - - - - 0.835 - - -
71. HES1 ENSGALG00000028015 6818 0.835 - - - - - - 0.835 - - - hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]
72. TMEM184C ENSGALG00000010019 7856 0.833 - - - - - - 0.833 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
73. COPS5 ENSGALG00000030843 11942 0.831 - - - - - - - 0.831 - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
74. SEC63 ENSGALG00000015308 11596 0.829 - - - - - - 0.829 - - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
75. GTF2IRD1 ENSGALG00000001263 14716 0.826 - - - - - - 0.826 - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
76. SNRNP40 ENSGALG00000000615 32298 0.824 - - - - - - 0.824 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
77. YWHAZ ENSGALG00000031387 84985 0.822 - - - - - - 0.822 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
78. SLC9A6 ENSGALG00000006180 1760 0.821 - - - - - - 0.821 - - - solute carrier family 9 member A6 [Source:HGNC Symbol;Acc:HGNC:11079]
79. CALD1 ENSGALG00000033471 8950 0.821 - - - - - - - - 0.821 - caldesmon 1 [Source:NCBI gene;Acc:373965]
80. LSM7 ENSGALG00000000408 19112 0.819 - - - - - - - 0.819 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420055]
81. C11H16ORF80 C11H16ORF80 18673 0.819 - - - - - - 0.819 - - -
82. ITGB1 ENSGALG00000007145 19551 0.816 - - - - - - 0.816 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
83. PHLDB2 ENSGALG00000015377 8560 0.816 - - - - - - 0.816 - - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
84. DNAJC2 ENSGALG00000008249 28064 0.815 - - - - - - - 0.815 - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
85. TM9SF3 ENSGALG00000005534 15290 0.815 - - - - - - - 0.815 - - transmembrane 9 superfamily member 3
86. SKAP2 ENSGALG00000030081 13746 0.813 - - - - - - 0.813 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
87. UCHL3 ENSGALG00000016921 16208 0.811 - - - - - - 0.811 - - - ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
88. AN1ZNF5L ENSGALG00000014589 21148 0.81 - - - - - - 0.810 - - - AN1-type zinc finger protein 5-like, transcript variant X2
89. UTP11L UTP11L 11927 0.808 - - - - - - 0.808 - - -
90. SSR3 ENSGALG00000028683 24334 0.806 - - - - - - 0.806 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
91. FAM63B 3793 0.806 - - - - - - 0.806 - - - family with sequence similarity 63 member B
92. TMEM167A ENSGALG00000027332 13862 0.805 - - - - - - 0.805 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
93. FKBP12 FKBP12 64317 0.805 - - - - - - 0.805 - - -
94. MYO1B ENSGALG00000007712 8755 0.805 - - - - - - 0.805 - - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
95. TRAM1 ENSGALG00000041112 22876 0.805 - - - - - - - 0.805 - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
96. GLRX3 ENSGALG00000010464 22578 0.803 - - - - - - 0.803 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
97. CTBP1 ENSGALG00000039942 9383 0.802 - - - - - - 0.802 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
98. PLEKHB2 ENSGALG00000002169 3832 0.802 - - - - - - 0.802 - - - pleckstrin homology domain containing B2 [Source:NCBI gene;Acc:424758]
99. NOC4L ENSGALG00000002272 9644 0.801 - - - - - - 0.801 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
100. gga-mir-1778 ENSGALG00000025181 8765 0.8 - - - - - - 0.800 - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]

There are 469 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA