Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SP4

Gene Name Gene ID Reads Annotation
SP4 ENSGALG00000039454 5597 Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]











Genes with expression patterns similar to SP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SP4 ENSGALG00000039454 5597 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
2. AMFR ENSGALG00000003107 6560 1.785 - - 0.786 - - - 0.999 - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
3. IFT57 ENSGALG00000015356 5540 1.779 - - 0.780 - - - 0.999 - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
4. BTBD1 ENSGALG00000006020 14157 1.768 - - 0.771 - - - 0.997 - - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
5. PSMD14 ENSGALG00000011128 13335 1.762 - - 0.764 - - - 0.998 - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
6. NANS ENSGALG00000015320 10552 1.696 - - - - - - 0.996 0.700 - - N-acetylneuraminate synthase [Source:NCBI gene;Acc:427283]
7. SNN ENSGALG00000028876 1687 1.487 - - 0.780 - - - - 0.707 - - stannin [Source:NCBI gene;Acc:416429]
8. NUP133 ENSGALG00000011091 3804 1 - - - - - - 1.000 - - - nucleoporin 133 [Source:HGNC Symbol;Acc:HGNC:18016]
9. RNF126 ENSGALG00000042948 4724 0.999 - - - - - - 0.999 - - - ring finger protein 126 [Source:NCBI gene;Acc:420085]
10. EMC1 ENSGALG00000003969 6876 0.999 - - - - - - 0.999 - - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
11. KDM4B ENSGALG00000034592 6711 0.999 - - - - - - 0.999 - - - lysine demethylase 4B, transcript variant X8
12. FBXL21 ENSGALG00000006327 2910 0.999 - - - - - - 0.999 - - - F-box and leucine rich repeat protein 21 [Source:NCBI gene;Acc:416306]
13. HIBCH ENSGALG00000043307 11990 0.999 - - - - - - 0.999 - - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
14. NUP188 ENSGALG00000043394 9288 0.999 - - - - - - 0.999 - - - nucleoporin 188 [Source:NCBI gene;Acc:417198]
15. ANAPC2 ENSGALG00000008625 8822 0.999 - - - - - - 0.999 - - - anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989]
16. SSR2 ENSGALG00000000764 32190 0.999 - - - - - - 0.999 - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
17. MSH6 ENSGALG00000008957 6396 0.999 - - - - - - 0.999 - - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
18. RWDD3 ENSGALG00000038421 10909 0.999 - - - - - - 0.999 - - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
19. SLC12A4 ENSGALG00000034179 5674 0.999 - - - - - - 0.999 - - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
20. ZNF367 ENSGALG00000012629 3215 0.999 - - - - - - 0.999 - - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
21. SMARCD2 ENSGALG00000029304 11867 0.999 - - - - - - 0.999 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
22. AP1G1 12403 0.999 - - - - - - 0.999 - - - adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
23. NUP153 ENSGALG00000012720 8079 0.999 - - - - - - 0.999 - - - nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]
24. MIPEP ENSGALG00000017118 8666 0.999 - - - - - - 0.999 - - - mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
25. SPAG1 ENSGALG00000033254 1370 0.999 - - - - - - 0.999 - - - sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
26. ZNF384 ENSGALG00000032599 2369 0.999 - - - - - - 0.999 - - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
27. MAMDC2 ENSGALG00000015115 1512 0.999 - - - - - - 0.999 - - - MAM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23673]
28. USP9X ENSGALG00000016236 9419 0.998 - - - - - - 0.998 - - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
29. PRIM2 ENSGALG00000016278 5160 0.998 - - - - - - 0.998 - - - DNA primase subunit 2 [Source:NCBI gene;Acc:421878]
30. NDUFS5 ENSGALG00000003625 27698 0.998 - - - - - - 0.998 - - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
31. RBPMS_1 ENSGALG00000010291 16146 0.998 - - - - - - 0.998 - - - RNA binding protein, mRNA processing factor [Source:HGNC Symbol;Acc:HGNC:19097]
32. MEX3A ENSGALG00000014016 3692 0.998 - - - - - - 0.998 - - - mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482]
33. OAZ2 ENSGALG00000036288 13213 0.998 - - - - - - 0.998 - - - Gallus gallus ornithine decarboxylase antizyme 2 (OAZ2), mRNA. [Source:RefSeq mRNA;Acc:NM_001142862]
34. NTPCR ENSGALG00000011015 8652 0.998 - - - - - - 0.998 - - - nucleoside-triphosphatase, cancer-related [Source:NCBI gene;Acc:428588]
35. CDH3 5050 0.998 - - - - - - 0.998 - - - cadherin 3
36. SPC25 ENSGALG00000010900 14238 0.997 - - - - - - 0.997 - - - SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
37. HOXB2 ENSGALG00000025774 5280 0.997 - - - - - - 0.997 - - - homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]
38. FAM174A ENSGALG00000026203 8369 0.997 - - - - - - 0.997 - - - family with sequence similarity 174 member A [Source:HGNC Symbol;Acc:HGNC:24943]
39. MRPL21 ENSGALG00000004362 20796 0.996 - - - - - - 0.996 - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
40. TCF21 ENSGALG00000029024 8252 0.996 - - - - - - 0.996 - - - transcription factor 21 [Source:NCBI gene;Acc:421697]
41. ACVR1 ENSGALG00000037301 6448 0.996 - - - - - - 0.996 - - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
42. HOXA4 ENSGALG00000022622 22327 0.991 - - - - - - 0.991 - - - homeobox A4 [Source:NCBI gene;Acc:395307]
43. NDUFB5 ENSGALG00000009076 32963 0.987 - - - - - - 0.987 - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
44. ZC3H15 ENSGALG00000041857 19808 0.986 - - - - - - 0.986 - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
45. THG1L ENSGALG00000003722 7497 0.983 - - - - - - 0.983 - - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
46. ERLIN2 ENSGALG00000003092 18251 0.98 - - - - - - 0.980 - - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
47. EIF3A ENSGALG00000009328 39982 0.978 - - - - - - 0.978 - - - eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
48. AKAP12 ENSGALG00000036240 64617 0.975 - - - - - - 0.975 - - - A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]
49. PPP2CA ENSGALG00000006462 26306 0.972 - - - - - - 0.972 - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
50. COX6A1 ENSGALG00000007205 72629 0.955 - - - - - - 0.955 - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
51. TUBB2B ENSGALG00000012821 41535 0.89 - - - - - - 0.890 - - - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
52. SPCS1 ENSGALG00000001655 7718 0.874 - - 0.874 - - - - - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
53. CHALK5 CHALK5 1351 0.865 - - 0.865 - - - - - - -
54. ZNF207 ENSGALG00000003454 47086 0.86 - - - - - - 0.860 - - - zinc finger protein 207 [Source:HGNC Symbol;Acc:HGNC:12998]
55. ST14 ENSGALG00000001331 1655 0.857 - - 0.857 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
56. SEC22B ENSGALG00000039704 16080 0.853 - - 0.853 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
57. SLC41A1 ENSGALG00000000721 1604 0.851 - - 0.851 - - - - - - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
58. PCYT1B 190 0.849 - - 0.849 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
59. TTPAL ENSGALG00000004244 2734 0.848 - - 0.848 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
60. DARS2 ENSGALG00000023749 2386 0.836 - - 0.836 - - - - - - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
61. GGT7 ENSGALG00000001062 476 0.834 - - 0.834 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
62. PDPK1 ENSGALG00000006418 13412 0.832 - - 0.832 - - - - - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
63. GTF2E1 ENSGALG00000042320 7712 0.831 - - 0.831 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
64. BTG1L ENSGALG00000004676 2293 0.831 - - 0.831 - - - - - - - protein BTG1-like
65. GFER ENSGALG00000005579 1367 0.831 - - 0.831 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
66. BRE 10440 0.83 - - 0.830 - - - - - - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
67. GCC2 ENSGALG00000016806 1085 0.83 - - 0.830 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
68. FBN1 ENSGALG00000004960 2130 0.829 - - 0.829 - - - - - - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
69. TFAP2C ENSGALG00000007690 768 0.829 - - 0.829 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
70. DCP1B 1306 0.829 - - 0.829 - - - - - - - decapping mRNA 1B
71. DAK DAK 13208 0.828 - - 0.828 - - - - - - -
72. WDR92 ENSGALG00000008760 3934 0.826 - - 0.826 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
73. RBBP8 ENSGALG00000014982 3255 0.825 - - 0.825 - - - - - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
74. PTP4A1 ENSGALG00000016271 23953 0.825 - - 0.825 - - - - - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
75. SESN1 ENSGALG00000015286 2387 0.824 - - 0.824 - - - - - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
76. TAF1B ENSGALG00000016437 2318 0.823 - - 0.823 - - - - - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
77. SLC37A3 ENSGALG00000012849 836 0.822 - - 0.822 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
78. CEP104 ENSGALG00000000978 1130 0.821 - - 0.821 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
79. RPS6KB1 ENSGALG00000005198 169 0.82 - - 0.820 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
80. TCTN2 ENSGALG00000023683 3596 0.82 - - 0.820 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
81. TUBA4A ENSGALG00000000433 1367 0.819 - - 0.819 - - - - - - - tubulin alpha 4a
82. PRMT7 ENSGALG00000038865 2666 0.818 - - 0.818 - - - - - - - protein arginine methyltransferase 7 [Source:NCBI gene;Acc:415620]
83. N4BP2L2 857 0.817 - - 0.817 - - - - - - - NEDD4 binding protein 2 like 2, transcript variant X7
84. GORAB ENSGALG00000003329 1958 0.817 - - 0.817 - - - - - - - golgin, RAB6 interacting [Source:HGNC Symbol;Acc:HGNC:25676]
85. WHSC1 1712 0.816 - - 0.816 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
86. RAD54L2 ENSGALG00000003243 187 0.816 - - 0.816 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
87. ADK ENSGALG00000005057 199 0.816 - - 0.816 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
88. BORA ENSGALG00000016931 3660 0.815 - - 0.815 - - - - - - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
89. GSDMA ENSGALG00000013495 1650 0.815 - - 0.815 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
90. ENSGALG00000004931 ENSGALG00000004931 2737 0.814 - - 0.814 - - - - - - -
91. HMGN1 ENSGALG00000016067 17375 0.814 - - 0.814 - - - - - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
92. ZNF639 ENSGALG00000005944 6387 0.814 - - 0.814 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
93. LMNB2 ENSGALG00000000470 4364 0.814 - - 0.814 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
94. UEVLD ENSGALG00000006342 164 0.814 - - 0.814 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
95. TRIT1 ENSGALG00000003851 1518 0.814 - - 0.814 - - - - - - - tRNA isopentenyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:20286]
96. ABCC3 ENSGALG00000007522 340 0.814 - - 0.814 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
97. ENSGALG00000020103 ENSGALG00000020103 64 0.813 - - 0.813 - - - - - - -
98. CHGA ENSGALG00000010820 1028 0.813 - - 0.813 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
99. PRUNE PRUNE 452 0.813 - - 0.813 - - - - - - -
100. LPCAT3 ENSGALG00000014570 7919 0.812 - - 0.812 - - - - - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]

There are 339 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA