Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SOX8

Gene Name Gene ID Reads Annotation
SOX8 SOX8 22










Genes with expression patterns similar to SOX8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SOX8 SOX8 22 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-217m5.3 si:dkey-217m5.3 22 2.748 1.000 - - - - 1.000 0.748 - -
3. CPNE7 ENSDARG00000102584 95 2.437 0.746 0.832 - - - - 0.859 - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
4. DGKG ENSDARG00000062696 1 2 - - - - 1.000 - 1.000 - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
5. CABZ01085626.1 ENSDARG00000117294 8 2 - - 1.000 - - - 1.000 - -
6. BX000701.3 BX000701.3 4 2 1.000 - 1.000 - - - - - -
7. CABZ01112732.1 ENSDARG00000068453 4 2 - - 1.000 - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
8. 5S_rRNA_10 5S_rRNA_10 2 2 1.000 - - - - - 1.000 - -
9. F2RL3 ENSDARG00000079399 29 2 1.000 - - - - - 1.000 - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
10. ttc25 ENSDARG00000058140 2 2 - - - - 1.000 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
11. ssh1b ENSDARG00000010031 4 2 1.000 - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
12. ciita ENSDARG00000090851 5 2 1.000 - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
13. PLA2G4C_2 PLA2G4C_2 10 2 - 1.000 - - - 1.000 - - -
14. sele ENSDARG00000009123 122 2 1.000 - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
15. Metazoa_SRP_5 Metazoa_SRP_5 2 2 - - - - 1.000 1.000 - - -
16. zgc:173443 ENSDARG00000034403 26 2 - - - - 1.000 1.000 - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
17. si:ch211-160d14.9 8 2 1.000 - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
18. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.984 1.000 0.984 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
19. Metazoa_SRP_2 Metazoa_SRP_2 2 1.972 1.000 - - 0.972 - - - - -
20. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.966 1.000 - - - - - 0.966 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
21. CU984579.1 ENSDARG00000116863 15 1.956 1.000 - - - - 0.956 - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
22. epha6 ENSDARG00000022971 52 1.942 - - - - - - 1.000 - 0.942 eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
23. si:dkeyp-75b4.10 ENSDARG00000079043 7 1.942 - - - - - - 1.000 - 0.942 si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
24. EGR4 ENSDARG00000077799 34 1.941 - - 1.000 - 0.941 - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
25. CABZ01069081.1 CABZ01069081.1 16 1.906 1.000 - - - - - 0.906 - -
26. CABZ01028403.1 CABZ01028403.1 48 1.891 - - - - - 0.891 1.000 - -
27. ctssa ctssa 24 1.889 - - - - 1.000 - 0.889 - -
28. cacnb2a ENSDARG00000099045 374 1.881 1.000 - - - - - 0.881 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
29. si:zfos-979f1.2 ENSDARG00000011652 24 1.877 1.000 - - - - 0.877 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
30. sycp1 ENSDARG00000003904 8 1.877 1.000 - - - - 0.877 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
31. PARM1 ENSDARG00000114063 58 1.857 1.000 0.857 - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
32. opn1mw1 ENSDARG00000097008 9 1.85 - 1.000 - - - - 0.850 - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
33. esr2b ENSDARG00000034181 20 1.85 - 1.000 - - - - 0.850 - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
34. si:dkey-242e21.3 ENSDARG00000075723 77 1.85 - - - - - 1.000 0.850 - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
35. CR556708.1 ENSDARG00000100565 6 1.848 - - - 0.848 1.000 - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
36. CABZ01006254.1 CABZ01006254.1 95 1.848 1.000 - - 0.848 - - - - -
37. FKBP15 FKBP15 15 1.83 0.830 1.000 - - - - - - -
38. c1qa ENSDARG00000044613, ENSDARG00000109639 35 1.822 0.915 - - - - 0.907 - - - complement component 1, q subcomponent, A chain [Source:ZFIN;Acc:ZDB-GENE-050522-86]
39. si:dkey-1b17.5 ENSDARG00000101425 130 1.815 - 1.000 - - - - 0.815 - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
40. vipr1b ENSDARG00000059058 62 1.809 1.000 - - - - - 0.809 - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
41. klf6b ENSDARG00000038561 27 1.8 1.000 - 0.800 - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
42. tbx16 ENSDARG00000007329 255 1.798 - 0.917 - - - - 0.881 - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
43. CCNJ ENSDARG00000059917 115 1.787 - 1.000 - - - - - - 0.787 cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
44. LRRC61 ENSDARG00000077357 55 1.784 - - - - - 1.000 0.784 - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
45. si:dkey-192i18.3 si:dkey-192i18.3 47 1.782 - - - - - 0.877 - - 0.905
46. gpr158 gpr158 52 1.776 - - - 0.776 - - 1.000 - -
47. vmhcl 119 1.769 1.000 - - - 0.769 - - - - ventricular myosin heavy chain-like
48. ubxn10 ENSDARG00000052535 24 1.766 1.000 - - - - - 0.766 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
49. RBM44 RBM44 25 1.764 - 1.000 - - - - 0.764 - -
50. ARHGAP17 ARHGAP17 29 1.764 1.000 - - - - - 0.764 - -
51. pde4cb ENSDARG00000002411 63 1.757 - 0.945 - - - 0.812 - - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
52. CABZ01117079.1 CABZ01117079.1 123 1.751 - 0.846 - - - - - - 0.905
53. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.746 0.746 - - - 1.000 - - - -
54. cd40 ENSDARG00000054968 90 1.744 - 0.913 - - - - - - 0.831 CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
55. taar18d ENSDARG00000054252 3 1.743 - - 0.743 - - 1.000 - - - trace amine associated receptor 18d [Source:ZFIN;Acc:ZDB-GENE-060413-12]
56. serpine3 ENSDARG00000057108 49 1.74 0.825 - - - - - - - 0.915 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
57. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1.733 1.000 0.733 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
58. pyya ENSDARG00000053449 134 1.733 - 1.000 - - 0.733 - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
59. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1.729 1.000 - 0.729 - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
60. LAMA3 ENSDARG00000071462 5 1.729 - - 0.729 - - - 1.000 - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
61. has3 ENSDARG00000057210, ENSDARG00000116537 108 1.725 - 0.725 - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
62. snoMBII-202_1 snoMBII-202_1 2 1.724 - - 1.000 - - 0.724 - - -
63. guk1b ENSDARG00000005776 23 1.724 - - - - 1.000 0.724 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
64. zgc:153896 ENSDARG00000003977 142 1.718 0.881 0.837 - - - - - - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
65. CABZ01080134.1 CABZ01080134.1 2 1.715 - - 1.000 - - - - 0.715 -
66. si:dkey-228c11.4 si:dkey-228c11.4 5 1.715 - - 1.000 - - - - 0.715 -
67. BX248324.1 ENSDARG00000096489 3 1.715 - - 1.000 - - - - 0.715 -
68. si:dkey-286j17.3 si:dkey-286j17.3 8 1.715 - - - - 1.000 - - 0.715 -
69. si:ch211-196n4.5 si:ch211-196n4.5 63 1.714 0.881 - - - - - 0.833 - -
70. zgc:136254 ENSDARG00000068465 27 1.702 - 0.987 - - - - - 0.715 - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
71. slc24a4b ENSDARG00000067509 33 1.697 - 0.925 0.772 - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
72. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.693 - - - 0.953 - - 0.740 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
73. DPEP3 DPEP3 53 1.679 - 0.964 - - - - - 0.715 -
74. si:dkeyp-35e5.9 ENSDARG00000103527 24 1.672 - - - 0.749 - - 0.923 - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
75. sostdc1a ENSDARG00000068892 127 1.645 - 0.899 - - - 0.746 - - - sclerostin domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-050417-64]
76. isg20l2 ENSDARG00000102266 167 1.64 - - - - - 0.747 - - 0.893 interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
77. zgc:112038 ENSDARG00000046140 73 1.637 0.746 0.891 - - - - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
78. polh ENSDARG00000070231, ENSDARG00000111719 154 1.633 - 0.858 - 0.775 - - - - - polymerase (DNA directed), eta [Source:ZFIN;Acc:ZDB-GENE-060421-4949]
79. IQUB ENSDARG00000061899 91 1.63 - - - - - - 0.901 - 0.729 IQ motif and ubiquitin domain containing [Source:ZFIN;Acc:ZDB-GENE-110421-1]
80. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1.624 - - - - - - 0.764 - 0.860 doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
81. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 1.62 - 0.770 - - - - 0.850 - - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
82. rsph9 ENSDARG00000017355 144 1.618 - - - - - - 0.826 - 0.792 radial spoke head 9 homolog [Source:ZFIN;Acc:ZDB-GENE-051120-129]
83. thoc6 ENSDARG00000037966, ENSDARG00000110342, ENSDARG00000116948 554 1.611 - - - - - 0.812 0.799 - - THO complex 6 [Source:ZFIN;Acc:ZDB-GENE-041010-198]
84. tmem237a ENSDARG00000041735 13 1.606 - - 0.772 - - - 0.834 - - transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
85. si:ch211-207c7.6 si:ch211-207c7.6 23 1.605 0.731 - - - - - 0.874 - -
86. SFT2D2_1 SFT2D2_1 219 1.602 - - - - - - - 0.715 0.887
87. ccdc130 ENSDARG00000041533, ENSDARG00000113467 281 1.571 - 0.838 - - - - 0.733 - - coiled-coil domain containing 130 [Source:ZFIN;Acc:ZDB-GENE-040912-36]
88. gpx1b ENSDARG00000006207 67 1.55 - - - 0.700 - - 0.850 - - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
89. GDPD4_1 GDPD4_1 190 1.533 - 0.815 - - - - 0.718 - -
90. si:ch211-229l10.12 si:ch211-229l10.12 95 1.528 - 0.729 - - - - 0.799 - -
91. ccdc146 ENSDARG00000004794 108 1.526 - 0.813 - - - - 0.713 - - coiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
92. CU693494.3 CU693494.3 169 1.525 - - - - - - 0.785 - 0.740
93. lcp2a ENSDARG00000055955 23 1.493 - - 0.729 - - - 0.764 - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
94. spint1b ENSDARG00000012467 97 1.456 - 0.723 - - - - - - 0.733 serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
95. slco5a1 slco5a1 383 1.452 0.717 - - - - - 0.735 - -
96. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
97. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
98. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
99. si:dkey-277m11.2 ENSDARG00000094879 15 1 - - - - - - 1.000 - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
100. CR759907.3 CR759907.3 3 1 - - - - - - 1.000 - -

There are 1814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA