Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOX6

Gene Name Gene ID Reads Annotation
SOX6 ENSGALG00000006074 102 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]











Genes with expression patterns similar to SOX6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOX6 ENSGALG00000006074 102 7 - - 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
2. ADAMTS18 ENSGALG00000005347 17 2 - - - - - - 1.000 1.000 - - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
3. ITGB8 ENSGALG00000010875 13 1.76 - - - 0.819 - 0.941 - - - - integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]
4. TMEM128 ENSGALG00000014992 6567 1.726 - - - - - - - - 0.746 0.980 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
5. KIAA1551 ENSGALG00000045168 3435 1.663 - - - - - - - - 0.714 0.949 KIAA1551, transcript variant X1
6. ECI2 ENSGALG00000012809 3692 1.639 - - - - - - - - 0.726 0.913 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
7. FSHR ENSGALG00000009100 18 1.564 - - - - - 0.829 0.735 - - - follicle stimulating hormone receptor [Source:NCBI gene;Acc:395962]
8. SOS2 ENSGALG00000012273 41 1.56 - - - - - 0.813 - 0.747 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
9. GP9 GP9 6 1 - - - - - - 1.000 - - -
10. gga-mir-1634-2 gga-mir-1634-2 1 1 - - - - - 1.000 - - - -
11. TSNAXIP1 ENSGALG00000001533 9 1 - - - - - - 1.000 - - - translin associated factor X interacting protein 1, transcript variant X2
12. ARL15 ENSGALG00000014911 13 1 - - - - - 1.000 - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. RGMB ENSGALG00000015284 14 1 - - - - - - 1.000 - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
14. ITIH3 ENSGALG00000001697 2 1 - - - - - 1.000 - - - - inter-alpha-trypsin inhibitor heavy chain 3 [Source:HGNC Symbol;Acc:HGNC:6168]
15. PRPS2 ENSGALG00000016592 165 1 - - - - - 1.000 - - - - phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
16. gga-mir-6585 ENSGALG00000027202 102 1 - - - - - - 1.000 - - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
17. ENSGALG00000015888 ENSGALG00000015888 12 1 - - - - - - 1.000 - - -
18. OIP5 ENSGALG00000008579 27 1 - - - - - - 1.000 - - - Opa interacting protein 5 [Source:NCBI gene;Acc:423212]
19. FADS1L1 ENSGALG00000020485 3 1 - - - - - 1.000 - - - - fatty acid desaturase 1-like 1
20. CDCP2 ENSGALG00000010752 4 1 - - - - - 1.000 - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
21. DLK1 ENSGALG00000011244 5 1 - - - - - 1.000 - - - - delta like non-canonical Notch ligand 1 [Source:NCBI gene;Acc:423459]
22. ENSGALG00000009329 ENSGALG00000009329 2 1 - - - - - 1.000 - - - -
23. CMTM4 ENSGALG00000005251 5 1 - - - - - - 1.000 - - - CKLF like MARVEL transmembrane domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19175]
24. HBE1 ENSGALG00000028273 189 1 - - - - - 1.000 - - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
25. ENSGALG00000001754 ENSGALG00000001754 45 1 - - - - - 1.000 - - - -
26. ZBTB37 ENSGALG00000004597 1 1 - - - - - 1.000 - - - - zinc finger and BTB domain containing 37 [Source:HGNC Symbol;Acc:HGNC:28365]
27. ENSGALG00000012217 ENSGALG00000012217 8 1 - - - - - 1.000 - - - -
28. K60 K60 4 1 - - - - - 1.000 - - - -
29. TNNI3K ENSGALG00000011353 10 1 - - - - - 1.000 - - - - TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
30. MYO7A ENSGALG00000031450 16 1 - - - - - 1.000 - - - - myosin VIIA [Source:HGNC Symbol;Acc:HGNC:7606]
31. SENP7 ENSGALG00000044642 48 1 - - - - - - 1.000 - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
32. SLC2A5 ENSGALG00000002466 26 1 - - - - - - 1.000 - - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
33. TPK1 ENSGALG00000040298 74 1 - - - - - - 1.000 - - - thiamin pyrophosphokinase 1 [Source:HGNC Symbol;Acc:HGNC:17358]
34. MEGF6L ENSGALG00000009458 14 1 - - - - - - 1.000 - - - multiple EGF-like-domains 6-like, transcript variant X21
35. GPR114 GPR114 46 1 - - - - - - 1.000 - - -
36. TRIM66 ENSGALG00000005958 5 1 - - - - - - 1.000 - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
37. HELB ENSGALG00000009885 8 1 - - - - - - 1.000 - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
38. NPHS2 ENSGALG00000004163 850 1 - - - - - 1.000 - - - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
39. DUSP8 ENSGALG00000006647 3 1 - - - - - 1.000 - - - - dual specificity phosphatase 8 [Source:HGNC Symbol;Acc:HGNC:3074]
40. SFT2D2 ENSGALG00000019228 10 1 - - - - - 1.000 - - - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
41. OCM2 ENSGALG00000003465 74 1 - - - - - - 1.000 - - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
42. COMMD6 ENSGALG00000016922 24 1 - - - - - - 1.000 - - - COMM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24015]
43. ENSGALG00000029065 ENSGALG00000029065 2 1 - - - - - 1.000 - - - -
44. KLHDC10 ENSGALG00000008013 4 1 - - - - - - 1.000 - - - kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
45. SBSPON ENSGALG00000043532 5 1 - - - - - 1.000 - - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
46. SLC16A6 ENSGALG00000004162 21 1 - - - - - - 1.000 - - - solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]
47. ENSGALG00000008069 ENSGALG00000008069 2 1 - - - - - 1.000 - - - -
48. ABCA7 ENSGALG00000002453 22 1 - - - - - 1.000 - - - - ATP-binding cassette, sub-family A (ABC1), member 7, transcript variant X5
49. ENSGALG00000003796 ENSGALG00000003796 7 1 - - - - - 1.000 - - - -
50. RHCG ENSGALG00000006635 7 1 - - - - - - 1.000 - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
51. ANKRD55 ENSGALG00000014717 3 1 - - - - - - 1.000 - - - ankyrin repeat domain 55 [Source:HGNC Symbol;Acc:HGNC:25681]
52. C4orf45 ENSGALG00000045983 1 1 - - - - - 1.000 - - - - chromosome 4 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:26342]
53. H2B-I H2B-I 13 1 - - - - - 1.000 - - - -
54. UNC13D ENSGALG00000002234 44 1 - - - - - - 1.000 - - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
55. MYBPC3 ENSGALG00000008148 315 1 - - - - - - 1.000 - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
56. TSHR ENSGALG00000010572 1 1 - - - - - 1.000 - - - - thyroid stimulating hormone receptor [Source:NCBI gene;Acc:428900]
57. FOXE3 11 1 - - - - - 1.000 - - - - forkhead box E3
58. HLCS ENSGALG00000016047 30 1 - - - - - - 1.000 - - - holocarboxylase synthetase [Source:HGNC Symbol;Acc:HGNC:4976]
59. LOC422926 ENSGALG00000027090 16 1 - - - - - - 1.000 - - - uncharacterized LOC422926
60. NOD1 ENSGALG00000036807 10 1 - - - - - 1.000 - - - - Gallus gallus nucleotide binding oligomerization domain containing 1 (NOD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318438]
61. LIPI ENSGALG00000015662 4 1 - - - - - - 1.000 - - - lipase member I, transcript variant X1
62. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - - - - 1.000 - - -
63. ENSGALG00000010336 ENSGALG00000010336 16 1 - - - - - 1.000 - - - -
64. TMED6 ENSGALG00000000654 8 1 - - - - - - 1.000 - - - transmembrane p24 trafficking protein 6 [Source:NCBI gene;Acc:101750075]
65. SLC35A5 11 1 - - - - - - 1.000 - - - solute carrier family 35 member A5, transcript variant X6
66. HFM1 ENSGALG00000006091 5 1 - - - - - - 1.000 - - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
67. SLITRK6 ENSGALG00000016904 30 1 - - - - - 1.000 - - - - SLIT and NTRK like family member 6 [Source:HGNC Symbol;Acc:HGNC:23503]
68. ACE2 ENSGALG00000016554 7 1 - - - - - - 1.000 - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
69. PKDCCB ENSGALG00000011166 74 1 - - - - - - 1.000 - - - protein kinase domain containing, cytoplasmic b
70. KRT12 ENSGALG00000019715 1 1 - - - - - 1.000 - - - - keratin 12 [Source:HGNC Symbol;Acc:HGNC:6414]
71. WDR65 WDR65 26 1 - - - - - - 1.000 - - -
72. KLF9 ENSGALG00000027374 38 1 - - - - - - 1.000 - - - Kruppel like factor 9 [Source:HGNC Symbol;Acc:HGNC:1123]
73. LMTK2 ENSGALG00000003479 46 1 - - - - - 1.000 - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
74. TUBB3 571 1 - - - - - - 1.000 - - - tubulin beta 3 class III
75. KCNV2 ENSGALG00000010173 2 1 - - - - - 1.000 - - - - potassium voltage-gated channel modifier subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:19698]
76. GHRHR-LR ENSGALG00000005242 2 1 - - - - - 1.000 - - - - growth-hormone releasing hormone-like peptide receptor
77. LRRC39 ENSGALG00000005284 5 1 - - - - - - 1.000 - - - leucine rich repeat containing 39 [Source:HGNC Symbol;Acc:HGNC:28228]
78. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - - - - 1.000 - - -
79. RSPH4A RSPH4A 34 1 - - - - - - 1.000 - - -
80. CDH9 ENSGALG00000012923 10 1 - - - - - - 1.000 - - - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
81. TINAG ENSGALG00000016300 5 1 - - - - - 1.000 - - - - tubulointerstitial nephritis antigen [Source:NCBI gene;Acc:421888]
82. ATP6V1C2 ENSGALG00000016446 3 1 - - - - - 1.000 - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
83. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - - - - 1.000 - - -
84. ENSGALG00000026079 ENSGALG00000026079 4 1 - - - - - 1.000 - - - -
85. PODN ENSGALG00000021869 71 1 - - - - - 1.000 - - - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
86. ARL6 ENSGALG00000019215 11 1 - - - - - 1.000 - - - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
87. PDZD3 ENSGALG00000006779 24 1 - - - - - - 1.000 - - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
88. FABP2 ENSGALG00000011986 15 1 - - - - - 1.000 - - - - fatty acid binding protein 2 [Source:NCBI gene;Acc:422678]
89. FAM124B ENSGALG00000005118 2 1 - - - - - 1.000 - - - - family with sequence similarity 124 member B [Source:HGNC Symbol;Acc:HGNC:26224]
90. ITSN2 ENSGALG00000016504 651 0.998 - - - - - - - - - 0.998 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
91. CXADR ENSGALG00000015701 96 0.998 - - - - - - - - - 0.998 coxsackie virus and adenovirus receptor, transcript variant X2
92. 5S_2 5S_2 58 0.998 - - - - - - - - - 0.998
93. CPNE2 ENSGALG00000001316 236 0.998 - - - - - - - - - 0.998 copine 2 [Source:NCBI gene;Acc:415646]
94. ZNF6 ZNF6 138 0.998 - - - - - - - - - 0.998
95. IL10R2 IL10R2 72 0.998 - - - - - - - - - 0.998
96. FAM190B FAM190B 165 0.998 - - - - - - - - - 0.998
97. APBA3 ENSGALG00000000740 1249 0.997 - - - - - - - - - 0.997 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
98. AURKA ENSGALG00000007768 793 0.997 - - - - - - - - - 0.997 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
99. PROM1 ENSGALG00000014496 2494 0.996 - - - - - - - - - 0.996 prominin 1 [Source:NCBI gene;Acc:422825]
100. SSH1 ENSGALG00000004928 222 0.996 - - - - - - - - - 0.996 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA