Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SOX5

Gene Name Gene ID Reads Annotation
SOX5 ENSGALG00000032768 998 SRY-box 5 [Source:NCBI gene;Acc:418195]











Genes with expression patterns similar to SOX5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOX5 ENSGALG00000032768 998 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SRY-box 5 [Source:NCBI gene;Acc:418195]
2. CHUK ENSGALG00000003289 5698 1.678 - - - - - - - 0.977 - 0.701 conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
3. II II 929 0.983 - - - - - - - 0.983 - -
4. DNAJC11 ENSGALG00000000627 769 0.983 - - - - - - - 0.983 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
5. HSPA13 ENSGALG00000019201 712 0.983 - - - - - - - 0.983 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
6. C4BPA ENSGALG00000001175 4278 0.981 - - - - - - - 0.981 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
7. TMEM200A ENSGALG00000002282 77 0.98 - - - - - - - 0.980 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
8. DSG2 ENSGALG00000015142 67 0.98 - - - - - - - 0.980 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
9. TFG ENSGALG00000015299 849 0.98 - - - - - - - 0.980 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
10. CWH43 ENSGALG00000041921 68 0.979 - - - - - - - 0.979 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
11. GAA ENSGALG00000038853 158 0.979 - - - - - - - 0.979 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
12. SLC30A2 ENSGALG00000010375 44 0.979 - - - - - - - 0.979 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
13. VPS37A ENSGALG00000013646 55 0.979 - - - - - - - 0.979 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
14. SEMA3E ENSGALG00000038225 677 0.979 - - - - - - - 0.979 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
15. TRIM62 ENSGALG00000028437 5124 0.979 - - - - - - - 0.979 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
16. YARS2 503 0.978 - - - - - - - 0.978 - - tyrosyl-tRNA synthetase 2
17. EX-FABP EX-FABP 516 0.978 - - - - - - - 0.978 - -
18. MDM4 ENSGALG00000000636 91 0.978 - - - - - - - 0.978 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
19. LAMP2 ENSGALG00000008572 198 0.977 - - - - - - - 0.977 - - lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
20. KIAA0930 ENSGALG00000014226 1243 0.977 - - - - - - - 0.977 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
21. LIPG ENSGALG00000043734 2490 0.977 - - - - - - - 0.977 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
22. FUBP1 ENSGALG00000008939 2850 0.976 - - - - - - - 0.976 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
23. TES ENSGALG00000031934 5908 0.976 - - - - - - - 0.976 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
24. TRMT61B ENSGALG00000008979 615 0.974 - - - - - - - 0.974 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
25. TRAM2 ENSGALG00000016673 438 0.974 - - - - - - - 0.974 - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
26. RIN3 ENSGALG00000010806 729 0.973 - - - - - - - 0.973 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
27. ORAI1 ENSGALG00000004240 515 0.973 - - - - - - - 0.973 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
28. B3GNT7 ENSGALG00000007701 929 0.972 - - - - - - - 0.972 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
29. PHLPP2 ENSGALG00000000875 561 0.972 - - - - - - - 0.972 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
30. SLC25A48 ENSGALG00000006341 2606 0.972 - - - - - - - 0.972 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
31. ARAP2 ENSGALG00000041373 233 0.97 - - - - - - - 0.970 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:16924]
32. LOC422106 ENSGALG00000019757 453 0.97 - - - - - - - 0.970 - - uncharacterized LOC422106
33. ANXA6 ENSGALG00000004357 2891 0.97 - - - - - - - 0.970 - - annexin A6 [Source:NCBI gene;Acc:395481]
34. PYGL ENSGALG00000012365 4691 0.97 - - - - - - - 0.970 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
35. ENSGALG00000001854 ENSGALG00000001854 965 0.969 - - - - - - - 0.969 - -
36. HSDL1 ENSGALG00000003273 1108 0.969 - - - - - - - 0.969 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
37. GADD45 GADD45 8780 0.968 - - - - - - - 0.968 - -
38. STK17B ENSGALG00000007924 519 0.968 - - - - - - - 0.968 - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
39. CASP7 ENSGALG00000008933 506 0.967 - - - - - - - 0.967 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
40. CCDC51 ENSGALG00000006465 1845 0.967 - - - - - - - 0.967 - - coiled-coil domain containing 51, transcript variant X1
41. SENP5 ENSGALG00000008545 909 0.967 - - - - - - - 0.967 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
42. ENSGALG00000016572 ENSGALG00000016572 79 0.967 - - - - - - - 0.967 - -
43. CENPC1 CENPC1 3324 0.967 - - - - - - - 0.967 - -
44. AMER1 ENSGALG00000007599 994 0.965 - - - - - - - 0.965 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
45. CECR5L ENSGALG00000005020 116 0.962 - - - - - - - 0.962 - - cat eye syndrome chromosome region, candidate 5-like
46. ECI2 ENSGALG00000012809 3692 0.962 - - - - - - - 0.962 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
47. TCEANC ENSGALG00000016581 948 0.961 - - - - - - - 0.961 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
48. NRG4 ENSGALG00000002952 1440 0.96 - - - - - - - 0.960 - - neuregulin 4 [Source:NCBI gene;Acc:415354]
49. TOX ENSGALG00000039102 1434 0.959 - - - - - - - 0.959 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
50. RASGEF1A ENSGALG00000002525 918 0.959 - - - - - - - 0.959 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
51. CHALK5 CHALK5 1351 0.959 - - - - - - - 0.959 - -
52. ANKRD40L ENSGALG00000026189 887 0.959 - - - - - - - 0.959 - - ankyrin repeat domain-containing protein 40-like, transcript variant X5
53. COL6A2 ENSGALG00000039216 892 0.959 - - - - - - - 0.959 - - collagen type VI alpha 2 chain [Source:NCBI gene;Acc:396292]
54. LRRC45 ENSGALG00000002877 1751 0.955 - - - - - - - 0.955 - - leucine rich repeat containing 45 [Source:NCBI gene;Acc:770573]
55. SEC11C ENSGALG00000031663 4266 0.955 - - - - - - - 0.955 - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
56. LDHA ENSGALG00000006300 4796 0.955 - - - - - - - 0.955 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
57. ZBTB26 ENSGALG00000042762 1920 0.954 - - - - - - - 0.954 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
58. TM2D3 ENSGALG00000026271 2566 0.953 - - - - - - - 0.953 - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
59. PAMR1 ENSGALG00000007886 928 0.952 - - - - - - - 0.952 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
60. MRC1 ENSGALG00000008629 259 0.951 - - - - - - - 0.951 - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
61. H4-I H4-I 2327 0.951 - - - - - - - 0.951 - -
62. DBR1 ENSGALG00000043797 1896 0.95 - - - - - - - 0.950 - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
63. EDA ENSGALG00000035966 602 0.949 - - - - - - - 0.949 - - ectodysplasin A [Source:HGNC Symbol;Acc:HGNC:3157]
64. NIT1 ENSGALG00000007585 1256 0.949 - - - - - - - 0.949 - - nitrilase 1 [Source:HGNC Symbol;Acc:HGNC:7828]
65. ABCB10 ENSGALG00000011096 1407 0.949 - - - - - - - 0.949 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
66. UBA7 ENSGALG00000036263 2918 0.949 - - - - - - - 0.949 - - ubiquitin-like modifier activating enzyme 7
67. CLUH ENSGALG00000005854 2100 0.946 - - - - - - - 0.946 - - clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
68. ENSGALG00000004032 ENSGALG00000004032 2010 0.945 - - - - - - - 0.945 - -
69. HDAC4 ENSGALG00000004288 2124 0.945 - - - - - - - 0.945 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
70. GPX7 ENSGALG00000010633 7224 0.945 - - - - - - - 0.945 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
71. CHKA ENSGALG00000036754 5077 0.944 - - - - - - - 0.944 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
72. ENSGALG00000006569 ENSGALG00000006569 2169 0.943 - - - - - - - 0.943 - -
73. ISCA2 ENSGALG00000020417 1130 0.942 - - - - - - - 0.942 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
74. RPAP2 ENSGALG00000005953 2085 0.938 - - - - - - - 0.938 - - RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
75. PINK1 ENSGALG00000037593 3794 0.935 - - - - - - - 0.935 - - PTEN induced putative kinase 1 [Source:HGNC Symbol;Acc:HGNC:14581]
76. GJB6 ENSGALG00000017136 500 0.935 - - - - - - - 0.935 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
77. PRPSAP1 ENSGALG00000021539 3517 0.934 - - - - - - - 0.934 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
78. LPIN1 ENSGALG00000016456 1044 0.932 - - - - - - - 0.932 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
79. SALL1 ENSGALG00000039238 3740 0.93 - - - - - - - 0.930 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
80. NXT2 ENSGALG00000008092 2477 0.929 - - - - - - - 0.929 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
81. MAPKKK3L ENSGALG00000005884 1011 0.929 - - - - - - - 0.929 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
82. FA2H ENSGALG00000002775 396 0.928 - - - - - - - 0.928 - - fatty acid 2-hydroxylase [Source:HGNC Symbol;Acc:HGNC:21197]
83. SLC41A1 ENSGALG00000000721 1604 0.927 - - - - - - - 0.927 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
84. TBX3 ENSGALG00000036043 2888 0.922 - - - - - - - 0.922 - - T-box 3 [Source:NCBI gene;Acc:374202]
85. LTV1 ENSGALG00000013765 2917 0.922 - - - - - - - 0.922 - - LTV1 ribosome biogenesis factor
86. TRIM71 ENSGALG00000019622 1633 0.918 - - - - - - - 0.918 - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
87. LRAT ENSGALG00000009276 220 0.917 - - - - - - - 0.917 - - lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685]
88. PSMD1 ENSGALG00000007664 7609 0.913 - - - - - - - 0.913 - - proteasome 26S subunit, non-ATPase 1 [Source:NCBI gene;Acc:424926]
89. FAM204A ENSGALG00000009307 3690 0.907 - - - - - - - 0.907 - - family with sequence similarity 204 member A [Source:HGNC Symbol;Acc:HGNC:25794]
90. GALK2 ENSGALG00000036201 1016 0.905 - - - - - - - 0.905 - - galactokinase 2 [Source:NCBI gene;Acc:415596]
91. YARS ENSGALG00000003563 11093 0.905 - - - - - - - 0.905 - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
92. E2F4 ENSGALG00000001722 2916 0.903 - - - - - - - 0.903 - - E2F transcription factor 4 [Source:NCBI gene;Acc:769430]
93. DNAJB12 ENSGALG00000034104 3021 0.901 - - - - - - - 0.901 - - DnaJ heat shock protein family (Hsp40) member B12 [Source:NCBI gene;Acc:423707]
94. DEDD ENSGALG00000043129 3422 0.901 - - - - - - - 0.901 - - death effector domain containing [Source:HGNC Symbol;Acc:HGNC:2755]
95. TUSC3 ENSGALG00000013674 2848 0.901 - - - - - - - 0.901 - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
96. GRAMD1C ENSGALG00000035629 2494 0.899 - - - - - - - 0.899 - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
97. MSRB1 ENSGALG00000005414 4197 0.898 - - - - - - - 0.898 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
98. FAM217B ENSGALG00000026542 2066 0.898 - - - - - - - 0.898 - - family with sequence similarity 217 member B [Source:HGNC Symbol;Acc:HGNC:16170]
99. C15ORF23 C15ORF23 14264 0.895 - - - - - - - 0.895 - -
100. HYOU1 ENSGALG00000007659 3555 0.894 - - - - - - - 0.894 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA