Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOX2

Gene Name Gene ID Reads Annotation
SOX2 ENSGALG00000043460 6 SRY-box 2 [Source:NCBI gene;Acc:396105]











Genes with expression patterns similar to SOX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOX2 ENSGALG00000043460 6 4 - - 1.000 1.000 - 1.000 - - - 1.000 SRY-box 2 [Source:NCBI gene;Acc:396105]
2. ENSGALG00000025985 ENSGALG00000025985 1 1 - - - 1.000 - - - - - -
3. GPR156 ENSGALG00000014973 4 1 - - - 1.000 - - - - - - G protein-coupled receptor 156, transcript variant X4
4. gga-let-7i ENSGALG00000018237 2 1 - - - 1.000 - - - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
5. PP2D1 ENSGALG00000044362 2 1 - - - 1.000 - - - - - - protein phosphatase 2C like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28406]
6. CMYA5 16 1 - - - 1.000 - - - - - - cardiomyopathy associated 5
7. CALB1 ENSGALG00000032282 16 1 - - - 1.000 - - - - - - calbindin 1 [Source:NCBI gene;Acc:396519]
8. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - 1.000 - - - - - -
9. HELB ENSGALG00000009885 8 1 - - - 1.000 - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
10. HOXA11 ENSGALG00000040021 3 1 - - - 1.000 - - - - - - homeobox A11 [Source:NCBI gene;Acc:395327]
11. PRG4 3 1 - - - 1.000 - - - - - - proteoglycan 4
12. NHSL1 ENSGALG00000026981 11 1 - - - 1.000 - - - - - - NHS like 1 [Source:HGNC Symbol;Acc:HGNC:21021]
13. FLT4 ENSGALG00000005802 5 1 - - - 1.000 - - - - - - fms related tyrosine kinase 4 [Source:NCBI gene;Acc:395742]
14. DES ENSGALG00000011306 16 1 - - - 1.000 - - - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
15. SLC6A6 ENSGALG00000006425 31 1 - - - 1.000 - - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
16. RNF180 ENSGALG00000014743 3 1 - - - 1.000 - - - - - - ring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
17. ENSGALG00000016269 ENSGALG00000016269 3 1 - - - 1.000 - - - - - -
18. ABHD3 ENSGALG00000014938 9 1 - - - 1.000 - - - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
19. KCNRG ENSGALG00000017012 4 1 - - - 1.000 - - - - - - potassium channel regulator [Source:HGNC Symbol;Acc:HGNC:18893]
20. SPOCK2 9 0.974 - - - - - 0.974 - - - - SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2, transcript variant X2
21. LRP3 ENSGALG00000004853 13 0.954 - - - - - 0.954 - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
22. ENSGALG00000028322 ENSGALG00000028322 19 0.954 - - - - - 0.954 - - - -
23. ERN1 ENSGALG00000003476 4 0.954 - - - - - 0.954 - - - - endoplasmic reticulum to nucleus signaling 1 [Source:NCBI gene;Acc:417414]
24. TPPP3 ENSGALG00000002103 1 0.954 - - - - - 0.954 - - - - tubulin polymerization promoting protein family member 3 [Source:HGNC Symbol;Acc:HGNC:24162]
25. CDH20 ENSGALG00000012906 2 0.954 - - - - - 0.954 - - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
26. RHPN1 ENSGALG00000034337 3 0.954 - - - - - 0.954 - - - - rhophilin Rho GTPase binding protein 1 [Source:HGNC Symbol;Acc:HGNC:19973]
27. LMO3 ENSGALG00000036358 1 0.954 - - - - - 0.954 - - - - LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]
28. SLC6A11 ENSGALG00000004879 16 0.954 - - - - - 0.954 - - - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
29. CDXB CDXB 143 0.954 - - - - - 0.954 - - - -
30. ENSGALG00000027815 ENSGALG00000027815 15 0.954 - - - - - 0.954 - - - -
31. C9orf171 C9orf171 35 0.954 - - - - - 0.954 - - - -
32. MYO18B ENSGALG00000045218 7 0.954 - - - - - 0.954 - - - - myosin XVIIIB [Source:HGNC Symbol;Acc:HGNC:18150]
33. GIF ENSGALG00000031546 2 0.954 - - - - - 0.954 - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
34. IPP ENSGALG00000010287 2 0.954 - - - - - 0.954 - - - - intracisternal A particle-promoted polypeptide [Source:HGNC Symbol;Acc:HGNC:6108]
35. MYNN ENSGALG00000009409 11 0.954 - - - - - 0.954 - - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
36. PSCA ENSGALG00000045875 5 0.954 - - - - - 0.954 - - - - prostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]
37. ENSGALG00000019221 ENSGALG00000019221 9 0.954 - - - - - 0.954 - - - -
38. ENSGALG00000028571 ENSGALG00000028571 1 0.954 - - - - - 0.954 - - - -
39. BPIFC BPIFC 1 0.954 - - - - - 0.954 - - - -
40. ENSGALG00000025714 ENSGALG00000025714 6 0.954 - - - - - 0.954 - - - -
41. MLH1 ENSGALG00000039169 19 0.954 - - - - - 0.954 - - - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]
42. GZF1_1 ENSGALG00000008350 92 0.953 - - - - - 0.953 - - - - GDNF inducible zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:15808]
43. ST3GAL4 ENSGALG00000029747 184 0.939 - - - - - 0.939 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:10864]
44. PARD6A ENSGALG00000001214 9 0.938 - - - - - 0.938 - - - - par-6 family cell polarity regulator alpha [Source:HGNC Symbol;Acc:HGNC:15943]
45. CNGB3 ENSGALG00000037644 1 0.929 - - - 0.929 - - - - - - cyclic nucleotide gated channel beta 3 [Source:HGNC Symbol;Acc:HGNC:2153]
46. ASXL1 ENSGALG00000006612 273 0.928 - - - - - 0.928 - - - - ASXL transcriptional regulator 1 [Source:HGNC Symbol;Acc:HGNC:18318]
47. TMEM52B ENSGALG00000034698 169 0.911 - - - - - 0.911 - - - - transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
48. LOC769139 ENSGALG00000026754 753 0.91 - - - - - 0.910 - - - - feather keratin 1-like, transcript variant X2
49. GAREML GAREML 8 0.909 - - - - - 0.909 - - - -
50. FBXO18 35 0.905 - - - - - 0.905 - - - - F-box protein, helicase, 18, transcript variant X4
51. BRINP2 ENSGALG00000004448 26 0.902 - - - - - 0.902 - - - - BMP/retinoic acid inducible neural specific 2 [Source:HGNC Symbol;Acc:HGNC:13746]
52. ENSGALG00000007420 ENSGALG00000007420 7 0.9 - - - - - 0.900 - - - -
53. FAR1 ENSGALG00000005353 12 0.9 - - - - - 0.900 - - - - fatty acyl-CoA reductase 1 [Source:NCBI gene;Acc:423028]
54. B3GNT7 ENSGALG00000007701 929 0.894 - - - 0.894 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
55. SOHO-1 ENSGALG00000015599 110 0.891 - - 0.891 - - - - - - - sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
56. CARD8 ENSGALG00000007698 45 0.877 - - - - - 0.877 - - - - caspase recruitment domain family, member 8
57. MLXIP ENSGALG00000004397 125 0.872 - - - - - 0.872 - - - - MLX interacting protein [Source:HGNC Symbol;Acc:HGNC:17055]
58. CCDC92 ENSGALG00000003146 40 0.871 - - - - - 0.871 - - - - coiled-coil domain containing 92 [Source:HGNC Symbol;Acc:HGNC:29563]
59. LPL ENSGALG00000015425 15 0.87 - - - - - - - - - 0.870 lipoprotein lipase [Source:NCBI gene;Acc:396219]
60. UBXN6 ENSGALG00000001146 122 0.869 - - - - - 0.869 - - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
61. RNF6 ENSGALG00000017105 11 0.862 - - - 0.862 - - - - - - ring finger protein 6 [Source:HGNC Symbol;Acc:HGNC:10069]
62. ENSGALG00000003619 ENSGALG00000003619 58 0.859 - - - - - 0.859 - - - -
63. ENSGALG00000009485 ENSGALG00000009485 4 0.857 - - - 0.857 - - - - - -
64. GABPB2 ENSGALG00000026734 7 0.857 - - - - - 0.857 - - - - GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]
65. ABCB5 ENSGALG00000010901 60 0.856 - - - - - 0.856 - - - - ATP binding cassette subfamily B member 5, transcript variant X1
66. KIAA2013 ENSGALG00000004533 8 0.854 - - - 0.854 - - - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
67. ENSGALG00000023265 ENSGALG00000023265 4 0.854 - - - 0.854 - - - - - -
68. CACNA2D4 4 0.846 - - - 0.846 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 4
69. CCNO ENSGALG00000028595 68 0.845 - - - - - 0.845 - - - - cyclin O [Source:HGNC Symbol;Acc:HGNC:18576]
70. IRX5 ENSGALG00000003588 79 0.845 - - - - - 0.845 - - - - iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]
71. DOK6 ENSGALG00000013753 2 0.841 - - - - - 0.841 - - - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
72. SV2C ENSGALG00000014967 7 0.838 - - - - - 0.838 - - - - synaptic vesicle glycoprotein 2C [Source:HGNC Symbol;Acc:HGNC:30670]
73. EBF1 ENSGALG00000003699 23 0.834 - - - 0.834 - - - - - - early B-cell factor 1 [Source:NCBI gene;Acc:395512]
74. ENSGALG00000001346 ENSGALG00000001346 233 0.82 - - - - - 0.820 - - - -
75. POPDC2 ENSGALG00000014988 281 0.819 - - - - - 0.819 - - - - popeye domain containing 2 [Source:NCBI gene;Acc:404229]
76. TCAIM ENSGALG00000011498 30 0.818 - - - - - 0.818 - - - - T-cell activation inhibitor, mitochondrial [Source:NCBI gene;Acc:420670]
77. FUT13 FUT13 49 0.817 - - - - - 0.817 - - - -
78. PCDH19 ENSGALG00000006822 13 0.815 - - - 0.815 - - - - - - protocadherin 19 [Source:NCBI gene;Acc:422263]
79. TMEM132B ENSGALG00000002742 122 0.813 - - - - - 0.813 - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
80. S100A13 ENSGALG00000046614 201 0.812 - - - - - - - - - 0.812 S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]
81. ECEL1 ENSGALG00000030420 670 0.809 - - - - - 0.809 - - - - endothelin converting enzyme like 1 [Source:HGNC Symbol;Acc:HGNC:3147]
82. PTGS2 ENSGALG00000033635 426 0.809 - - - - - 0.809 - - - - prostaglandin-endoperoxide synthase 2 [Source:NCBI gene;Acc:396451]
83. FZD10 ENSGALG00000042003 11 0.806 - - - - - 0.806 - - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
84. CELSR3 ENSGALG00000036763 4 0.805 - - - - - 0.805 - - - - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
85. U4 U4 69 0.802 - - - 0.802 - - - - - -
86. ENSGALG00000017301 ENSGALG00000017301 29 0.801 - - - 0.801 - - - - - -
87. ENSGALG00000020781 ENSGALG00000020781 5 0.799 - - 0.799 - - - - - - -
88. ZDHHC1 ENSGALG00000002091 3 0.799 - - 0.799 - - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
89. KCNT1 ENSGALG00000001645 1 0.799 - - 0.799 - - - - - - - potassium sodium-activated channel subfamily T member 1 [Source:NCBI gene;Acc:395248]
90. BIRC7 ENSGALG00000005762 1 0.799 - - 0.799 - - - - - - - baculoviral IAP repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:13702]
91. ENSGALG00000024319 ENSGALG00000024319 2 0.799 - - 0.799 - - - - - - -
92. SRPK3 SRPK3 2 0.799 - - 0.799 - - - - - - -
93. uc_5 uc_5 1 0.799 - - 0.799 - - - - - - -
94. CELF5 ENSGALG00000026716 2 0.799 - - 0.799 - - - - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
95. VPS37D 3 0.799 - - 0.799 - - - - - - - VPS37D, ESCRT-I subunit
96. ENSGALG00000003444 ENSGALG00000003444 1 0.799 - - 0.799 - - - - - - -
97. FBXL20 ENSGALG00000001682 2 0.799 - - 0.799 - - - - - - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]
98. ENSGALG00000026785 ENSGALG00000026785 1 0.799 - - 0.799 - - - - - - -
99. CNDP1 ENSGALG00000013697 7 0.799 - - 0.799 - - - - - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
100. TMEM71 ENSGALG00000044996 4 0.799 - - 0.799 - - - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]

There are 87 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA