Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOX13

Gene Name Gene ID Reads Annotation
SOX13 ENSGALG00000000583 30 SRY-box 13 [Source:HGNC Symbol;Acc:HGNC:11192]











Genes with expression patterns similar to SOX13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOX13 ENSGALG00000000583 30 3 - - 1.000 - - 1.000 - - - 1.000 SRY-box 13 [Source:HGNC Symbol;Acc:HGNC:11192]
2. SERTAD4 ENSGALG00000026359 400 0.865 - - - - - - - - - 0.865 SERTA domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25236]
3. DNAH7 ENSGALG00000007841 32 0.834 - - - - - - - - - 0.834 dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
4. AQP1 ENSGALG00000005209 111 0.833 - - - - - - - - - 0.833 aquaporin 1 [Source:NCBI gene;Acc:420384]
5. ENSGALG00000018875 ENSGALG00000018875 6 0.826 - - 0.826 - - - - - - -
6. ENSGALG00000012920 ENSGALG00000012920 8 0.821 - - - - - - - - - 0.821
7. NOX3 ENSGALG00000013659 4 0.821 - - - - - - - - - 0.821 NADPH oxidase 3 [Source:HGNC Symbol;Acc:HGNC:7890]
8. MUC4 4 0.821 - - - - - - - - - 0.821 mucin 4, cell surface associated, transcript variant X5
9. NCX1 NCX1 9 0.821 - - - - - - - - - 0.821
10. GPR12 ENSGALG00000017102 4 0.821 - - - - - - - - - 0.821 G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
11. DENND1B ENSGALG00000002246 6 0.821 - - - - - - - - - 0.821 DENN domain containing 1B [Source:HGNC Symbol;Acc:HGNC:28404]
12. CHST8 ENSGALG00000004903 16 0.821 - - - - - - - - - 0.821 carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
13. C2 ENSGALG00000035721 5 0.821 - - - - - - - - - 0.821 complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]
14. SCT ENSGALG00000034822, ENSGALG00000037020 14 0.821 - - - - - - - - - 0.821 secretin, transcript variant X6
15. ROS1 ENSGALG00000014913 7 0.821 - - - - - - - - - 0.821 ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
16. IFNG ENSGALG00000009903 5 0.821 - - - - - - - - - 0.821 interferon gamma [Source:NCBI gene;Acc:396054]
17. CSF3 ENSGALG00000030907 11 0.82 - - - - - - - - - 0.820 colony stimulating factor 3 [Source:NCBI gene;Acc:396216]
18. STOML3 ENSGALG00000017039 6 0.82 - - - - - - - - - 0.820 stomatin like 3 [Source:HGNC Symbol;Acc:HGNC:19420]
19. AK5 ENSGALG00000031652 12 0.819 - - - - - - - - - 0.819 adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
20. CCR5 ENSGALG00000037077 23 0.817 - - - - - - - - - 0.817 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
21. CFH ENSGALG00000002431 31 0.815 - - - - - - - - - 0.815 complement factor H, transcript variant X1
22. PLIN3 ENSGALG00000044632 370 0.813 - - - - - - - - - 0.813 perilipin 3, transcript variant X2
23. SNAPC1 ENSGALG00000011868 65 0.811 - - - - - - - - - 0.811 small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
24. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.81 - - - - - - - - - 0.810 family with sequence similarity 214 member B, transcript variant X14
25. CPNE7 ENSGALG00000000507 54 0.808 - - - - - - - - - 0.808 copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
26. LOC100858777 ENSGALG00000027624 58 0.807 - - - - - - - - - 0.807 rhodopsin, GQ-coupled-like
27. RGS6 ENSGALG00000009368 19 0.806 - - - - - - - - - 0.806 regulator of G-protein signaling 6 [Source:NCBI gene;Acc:395618]
28. gga-mir-1600 ENSGALG00000025438 248 0.804 - - - - - - - - - 0.804 gga-mir-1600 [Source:miRBase;Acc:MI0007327]
29. LHX9 ENSGALG00000002223 12 0.802 - - - - - - - - - 0.802 LIM homeobox 9 [Source:NCBI gene;Acc:396397]
30. RBBP6_1 ENSGALG00000006043 26 0.801 - - - - - - - - - 0.801 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
31. ENSGALG00000026371 ENSGALG00000026371 106 0.8 - - - - - - - - - 0.800
32. ISPD ENSGALG00000010795 7 0.799 - - - - - - - - - 0.799 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
33. ZNF770 ENSGALG00000009817 27 0.798 - - - - - - - - - 0.798 zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
34. SPINK4 ENSGALG00000043964 50 0.796 - - - - - - - - - 0.796 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
35. PPTC7 ENSGALG00000004550 154 0.795 - - - - - - - - - 0.795 PTC7 protein phosphatase homolog [Source:HGNC Symbol;Acc:HGNC:30695]
36. ENSGALG00000001629 ENSGALG00000001629 31 0.794 - - - - - - - - - 0.794
37. SERPINE3 ENSGALG00000017017 32 0.794 - - - - - - - - - 0.794 serpin family E member 3 [Source:HGNC Symbol;Acc:HGNC:24774]
38. ZC3H7B ENSGALG00000011965 6 0.79 - - - - - - - - - 0.790 zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
39. TCIRG1 ENSGALG00000036069 1117 0.788 - - - - - - - - - 0.788 T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
40. ENSGALG00000023119 ENSGALG00000023119 156 0.788 - - - - - - - - - 0.788
41. SUB1L1 ENSGALG00000027147 73 0.787 - - - - - - - - - 0.787 SUB1 homolog (S. cerevisiae)-like 1
42. ECSCR ENSGALG00000024379 313 0.785 - - - - - - - - - 0.785 endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
43. CTNNA3 ENSGALG00000002845 127 0.784 - - - - - - - - - 0.784 catenin alpha 3 [Source:NCBI gene;Acc:423648]
44. PIP5K1A ENSGALG00000027372 137 0.782 - - - - - - - - - 0.782 phosphatidylinositol-4-phosphate 5-kinase type 1 alpha [Source:NCBI gene;Acc:429983]
45. MANBA ENSGALG00000012308 84 0.781 - - 0.781 - - - - - - - mannosidase beta [Source:HGNC Symbol;Acc:HGNC:6831]
46. TTC9 ENSGALG00000017652 16 0.781 - - - - - - - - - 0.781 tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
47. ADAMTS5 ENSGALG00000015795 6 0.781 - - - - - - - - - 0.781 ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:HGNC Symbol;Acc:HGNC:221]
48. ESM1 ENSGALG00000027707 328 0.779 - - - - - - - - - 0.779 endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]
49. PIGQ ENSGALG00000001985 1584 0.777 - - - - - - - - - 0.777 phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
50. MYH7 ENSGALG00000035594 188 0.772 - - - - - - - - - 0.772 myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
51. EDC4 ENSGALG00000040875 44 0.771 - - - - - - - - - 0.771 enhancer of mRNA decapping 4 [Source:HGNC Symbol;Acc:HGNC:17157]
52. ZFYVE26 ENSGALG00000028762 18 0.771 - - - - - - - - - 0.771 zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
53. MISP 52 0.77 - - - - - - - - - 0.770 mitotic spindle positioning, transcript variant X2
54. SPINK5 SPINK5 195 0.767 - - - - - - - - - 0.767
55. SDSL ENSGALG00000008317 55 0.765 - - - - - - - - - 0.765 serine dehydratase like [Source:NCBI gene;Acc:417030]
56. MMEL1 ENSGALG00000001115 46 0.763 - - - - - - - - - 0.763 membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
57. FGFR1OP ENSGALG00000011423 2418 0.763 - - - - - - - - - 0.763 FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
58. LRRC3B ENSGALG00000011314 26 0.762 - - - - - - - - - 0.762 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
59. HBE1 ENSGALG00000028273 189 0.761 - - 0.761 - - - - - - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
60. CCDC112 ENSGALG00000045092 38 0.761 - - - - - - - - - 0.761 coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
61. LRRC49 ENSGALG00000004059 29 0.76 - - - - - - - - - 0.760 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
62. CD93 ENSGALG00000008359 235 0.755 - - - - - - - - - 0.755 CD93 molecule [Source:NCBI gene;Acc:421234]
63. TERF2IP ENSGALG00000000903 41 0.755 - - - - - - - - - 0.755 TERF2 interacting protein [Source:NCBI gene;Acc:395122]
64. NT5E ENSGALG00000015833 5 0.754 - - 0.754 - - - - - - - 5'-nucleotidase ecto
65. ENSGALG00000027856 ENSGALG00000027856 5 0.754 - - 0.754 - - - - - - -
66. RND2 ENSGALG00000002804 9 0.754 - - 0.754 - - - - - - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
67. ENSGALG00000024355 ENSGALG00000024355 2 0.754 - - 0.754 - - - - - - -
68. ZNF22 ZNF22 25 0.754 - - 0.754 - - - - - - -
69. RIPPLY1 RIPPLY1 34 0.754 - - 0.754 - - - - - - -
70. BCORL1 ENSGALG00000003976 9 0.754 - - 0.754 - - - - - - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
71. SLC15A1 ENSGALG00000016884 10 0.754 - - 0.754 - - - - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
72. SLC4A11 ENSGALG00000016017 4 0.754 - - 0.754 - - - - - - - solute carrier family 4 member 11 [Source:HGNC Symbol;Acc:HGNC:16438]
73. GJB3 ENSGALG00000028424 2 0.754 - - 0.754 - - - - - - - gap junction protein beta 3 [Source:HGNC Symbol;Acc:HGNC:4285]
74. LOC422106 ENSGALG00000019757 453 0.752 - - 0.752 - - - - - - - uncharacterized LOC422106
75. RPAIN ENSGALG00000001666 2676 0.75 - - - - - - - - - 0.750 RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
76. STX19 ENSGALG00000015413 28 0.75 - - - - - 0.750 - - - - syntaxin 19 [Source:HGNC Symbol;Acc:HGNC:19300]
77. HACD4 ENSGALG00000028142 395 0.749 - - - - - - - - - 0.749 3-hydroxyacyl-CoA dehydratase 4 [Source:HGNC Symbol;Acc:HGNC:20920]
78. SPAG17 55 0.748 - - 0.748 - - - - - - - sperm associated antigen 17
79. PDE4D ENSGALG00000014727 53 0.74 - - 0.740 - - - - - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]
80. NCALD ENSGALG00000032518 42 0.739 - - 0.739 - - - - - - - neurocalcin delta [Source:NCBI gene;Acc:396048]
81. PARVA ENSGALG00000005438 91 0.739 - - - - - - - - - 0.739 parvin alpha [Source:HGNC Symbol;Acc:HGNC:14652]
82. AGAP1 ENSGALG00000004045 47 0.738 - - - - - - - - - 0.738 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
83. BICC1 ENSGALG00000036095 42 0.737 - - - - - - - - - 0.737 BicC family RNA binding protein 1 [Source:NCBI gene;Acc:423604]
84. ICK ENSGALG00000016321 19 0.737 - - 0.737 - - - - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
85. GPAM ENSGALG00000008795 18 0.736 - - 0.736 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
86. FUCA2 ENSGALG00000013773 67 0.732 - - - - - - - - - 0.732 alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
87. LOC769486 ENSGALG00000029144 20 0.731 - - 0.731 - - - - - - - scale keratin-like, transcript variant X1
88. ATXN7L1 ENSGALG00000008115 84 0.73 - - - - - - - - - 0.730 ataxin 7 like 1 [Source:HGNC Symbol;Acc:HGNC:22210]
89. GSL ENSGALG00000008518 282 0.729 - - 0.729 - - - - - - - glutamine synthetase-like, transcript variant X4
90. HPCAL4 ENSGALG00000003829 75 0.728 - - - - - - - - - 0.728 hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]
91. ISLR ENSGALG00000021525 142 0.728 - - 0.728 - - - - - - - immunoglobulin superfamily containing leucine rich repeat [Source:HGNC Symbol;Acc:HGNC:6133]
92. SNORA65 SNORA65 9 0.725 - - 0.725 - - - - - - -
93. SORCS3 ENSGALG00000008434 136 0.725 - - - - - - - - - 0.725 sortilin related VPS10 domain containing receptor 3 [Source:HGNC Symbol;Acc:HGNC:16699]
94. KBTBD11 ENSGALG00000022887 168 0.725 - - 0.725 - - - - - - - kelch repeat and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29104]
95. MYO7A ENSGALG00000031450 16 0.724 - - 0.724 - - - - - - - myosin VIIA [Source:HGNC Symbol;Acc:HGNC:7606]
96. BSND ENSGALG00000043998 11 0.722 - - 0.722 - - - - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
97. STAB2 32 0.72 - - - - - - - - - 0.720 stabilin 2
98. ARNTL ENSGALG00000005378 19 0.719 - - 0.719 - - - - - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
99. LOC395381 ENSGALG00000006717 10 0.719 - - 0.719 - - - - - - - ovomucin, alpha subunit, transcript variant X4
100. NOG ENSGALG00000003114 12 0.716 - - - - - 0.716 - - - - noggin [Source:NCBI gene;Acc:373912]

There are 10 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA