Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOHO-1

Gene Name Gene ID Reads Annotation
SOHO-1 ENSGALG00000015599 110 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]











Genes with expression patterns similar to SOHO-1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOHO-1 ENSGALG00000015599 110 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
2. PPP1R17 ENSGALG00000036390 2418 1.731 - - - - - - - - 0.817 0.914 protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
3. ENSGALG00000027373 ENSGALG00000027373 2129 1.673 - - - - - - - - 0.834 0.839
4. ENSGALG00000011926 ENSGALG00000011926 6 1.664 - - - - - 0.789 0.875 - - -
5. CXorf36 ENSGALG00000016215 108 1.664 - - 0.790 0.874 - - - - - - chromosome X open reading frame 36 [Source:HGNC Symbol;Acc:HGNC:25866]
6. ENSGALG00000027002 ENSGALG00000027002 7570 1.66 - - - - - - - - 0.865 0.795
7. PAX-6 PAX-6 2650 1.648 - - - - - - - - 0.817 0.831
8. ASS1 ENSGALG00000023689 327 1.596 - - - - - - - - 0.742 0.854 argininosuccinate synthase 1 [Source:NCBI gene;Acc:417185]
9. CRABP-I ENSGALG00000003193 67258 1.552 - - - - - - - - 0.757 0.795 cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
10. ENPP2 ENSGALG00000032746 6086 1.503 - - - - - - - - 0.770 0.733 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
11. PAFAH2 ENSGALG00000021658 68 1.475 - - - - - 0.715 0.760 - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
12. BLNK ENSGALG00000006973 85 1.473 - - - - - 0.751 0.722 - - - B cell linker [Source:NCBI gene;Acc:395733]
13. PAPPA2 40 0.936 - - - - - - - - - 0.936 pappalysin 2
14. DBX1 ENSGALG00000003965 1432 0.922 - - - - - - - - - 0.922 developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
15. DHX58 ENSGALG00000023821 15 0.913 - - - 0.913 - - - - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
16. GPX2 ENSGALG00000042031 4 0.913 - - - 0.913 - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
17. CPB2 ENSGALG00000016985 3 0.913 - - - 0.913 - - - - - - carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]
18. IPCEF1 ENSGALG00000013625 3 0.913 - - - 0.913 - - - - - - interaction protein for cytohesin exchange factors 1, transcript variant X3
19. ENSGALG00000029114 ENSGALG00000029114 4 0.913 - - - 0.913 - - - - - -
20. PDE6C ENSGALG00000006626 6 0.913 - - - 0.913 - - - - - - phosphodiesterase 6C [Source:NCBI gene;Acc:395834]
21. FMO3 ENSGALG00000040573 26 0.913 - - - 0.913 - - - - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
22. SEC14L5 ENSGALG00000045758 25 0.911 - - - 0.911 - - - - - - SEC14 like lipid binding 5 [Source:HGNC Symbol;Acc:HGNC:29032]
23. DBX2 ENSGALG00000009604 367 0.909 - - - - - - - - - 0.909 developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
24. NOXO1 ENSGALG00000005572 14 0.907 - - - 0.907 - - - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
25. ZBTB47 ENSGALG00000005287 13 0.905 - - - - - 0.905 - - - - zinc finger and BTB domain containing 47 [Source:HGNC Symbol;Acc:HGNC:26955]
26. PRDM12 ENSGALG00000003895 35 0.905 - - - - - - - - - 0.905 PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
27. YAP1 ENSGALG00000038154 24 0.9 - - - - - - 0.900 - - - Yes associated protein 1 [Source:NCBI gene;Acc:396171]
28. ENSGALG00000025721 ENSGALG00000025721 33 0.9 - - - - - - 0.900 - - -
29. HAND1 ENSGALG00000035104 2351 0.898 - - - 0.898 - - - - - - heart and neural crest derivatives expressed 1 [Source:NCBI gene;Acc:395812]
30. TMEM71 ENSGALG00000044996 4 0.894 - - 0.894 - - - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]
31. CHRM3 6 0.894 - - 0.894 - - - - - - - cholinergic receptor muscarinic 3
32. GAL9 GAL9 1 0.894 - - 0.894 - - - - - - -
33. ENSGALG00000003444 ENSGALG00000003444 1 0.894 - - 0.894 - - - - - - -
34. FBXL20 ENSGALG00000001682 2 0.894 - - 0.894 - - - - - - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]
35. ENSGALG00000026785 ENSGALG00000026785 1 0.894 - - 0.894 - - - - - - -
36. CNDP1 ENSGALG00000013697 7 0.894 - - 0.894 - - - - - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
37. uc_5 uc_5 1 0.894 - - 0.894 - - - - - - -
38. CELF5 ENSGALG00000026716 2 0.894 - - 0.894 - - - - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
39. VPS37D 3 0.894 - - 0.894 - - - - - - - VPS37D, ESCRT-I subunit
40. EVC2 ENSGALG00000015029 51 0.894 - - - - - - 0.894 - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
41. ENSGALG00000020781 ENSGALG00000020781 5 0.894 - - 0.894 - - - - - - -
42. ZDHHC1 ENSGALG00000002091 3 0.894 - - 0.894 - - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
43. KCNT1 ENSGALG00000001645 1 0.894 - - 0.894 - - - - - - - potassium sodium-activated channel subfamily T member 1 [Source:NCBI gene;Acc:395248]
44. BIRC7 ENSGALG00000005762 1 0.894 - - 0.894 - - - - - - - baculoviral IAP repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:13702]
45. ENSGALG00000024319 ENSGALG00000024319 2 0.894 - - 0.894 - - - - - - -
46. SRPK3 SRPK3 2 0.894 - - 0.894 - - - - - - -
47. RASGRP1 ENSGALG00000009740 15 0.892 - - - 0.892 - - - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
48. SOX2 ENSGALG00000043460 6 0.891 - - 0.891 - - - - - - - SRY-box 2 [Source:NCBI gene;Acc:396105]
49. MAB21L1 ENSGALG00000045052 1677 0.89 - - - 0.890 - - - - - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
50. BCL2 ENSGALG00000012885 45 0.887 - - - 0.887 - - - - - - BCL2, apoptosis regulator [Source:NCBI gene;Acc:396282]
51. BST1 ENSGALG00000014509 12 0.882 - - - 0.882 - - - - - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
52. SLCO2A1 ENSGALG00000006471 18 0.881 - - - 0.881 - - - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
53. TMEM269 ENSGALG00000025800 143 0.88 - - - 0.880 - - - - - - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
54. ADAM17 ENSGALG00000016427 49 0.879 - - - 0.879 - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
55. C1orf222 C1orf222 61 0.877 - - - 0.877 - - - - - -
56. TNIP2 ENSGALG00000015666 28 0.875 - - - - - - 0.875 - - - TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
57. TUBGCP3 ENSGALG00000016836 332 0.875 - - - - - - 0.875 - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
58. C18orf63 ENSGALG00000044510 3 0.875 - - - - - - 0.875 - - - chromosome 18 open reading frame 63 [Source:HGNC Symbol;Acc:HGNC:40037]
59. IQSEC1 ENSGALG00000005042 24 0.875 - - - - - - 0.875 - - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
60. KCNS2 ENSGALG00000043764 9 0.875 - - - - - - 0.875 - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
61. SH3PXD2B ENSGALG00000002831 7 0.875 - - - - - - 0.875 - - - SH3 and PX domains 2B [Source:HGNC Symbol;Acc:HGNC:29242]
62. GALR GALR 17 0.875 - - - - - - 0.875 - - -
63. PTGS1 ENSGALG00000001314 7 0.875 - - - - - - 0.875 - - - prostaglandin-endoperoxide synthase 1 [Source:HGNC Symbol;Acc:HGNC:9604]
64. C14orf105 C14orf105 135 0.87 - - - 0.870 - - - - - -
65. CYP1A1 ENSGALG00000001325 6 0.869 - - - 0.869 - - - - - - cytochrome P450, family 1, subfamily A, polypeptide 1 [Source:NCBI gene;Acc:396052]
66. ENSGALG00000014750 ENSGALG00000014750 9 0.869 - - - 0.869 - - - - - -
67. ST6GAL1 ENSGALG00000005550 20 0.866 - - - 0.866 - - - - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 1 [Source:NCBI gene;Acc:396169]
68. ARSH ENSGALG00000016636 34 0.864 - - 0.864 - - - - - - - arylsulfatase family, member H [Source:NCBI gene;Acc:378798]
69. MAPK8 ENSGALG00000006109 51 0.861 - - - 0.861 - - - - - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
70. SLC2A5 ENSGALG00000002466 26 0.861 - - - - - 0.861 - - - - solute carrier family 2 member 5 [Source:HGNC Symbol;Acc:HGNC:11010]
71. ENSGALG00000022662 ENSGALG00000022662 17 0.86 - - - 0.860 - - - - - -
72. RECQL5 ENSGALG00000002424 16 0.859 - - - - - - 0.859 - - - RecQ like helicase 5 [Source:NCBI gene;Acc:373891]
73. TRAK2 ENSGALG00000008370 46 0.859 - - - - - - 0.859 - - - trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
74. PLEKHA1 ENSGALG00000034548 34 0.855 - - - - - - 0.855 - - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
75. EREG ENSGALG00000010864 46 0.854 - - - 0.854 - - - - - - epiregulin [Source:NCBI gene;Acc:408036]
76. PLEKHM2 ENSGALG00000003439 44 0.853 - - - - - - 0.853 - - - pleckstrin homology and RUN domain containing M2 [Source:HGNC Symbol;Acc:HGNC:29131]
77. RGS3 ENSGALG00000008881 3399 0.852 - - - - - - - - - 0.852 regulator of G protein signaling 3 [Source:NCBI gene;Acc:395110]
78. SPARCL1 ENSGALG00000010929 10 0.85 - - - - - - - - - 0.850 SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
79. GGPS1 ENSGALG00000042853 303 0.849 - - - - - - 0.849 - - - geranylgeranyl diphosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:4249]
80. FABP2 ENSGALG00000011986 15 0.848 - - - - - - - 0.848 - - fatty acid binding protein 2 [Source:NCBI gene;Acc:422678]
81. IFITM5 ENSGALG00000004239 56 0.847 - - - - - - 0.847 - - - interferon induced transmembrane protein 5 [Source:NCBI gene;Acc:422992]
82. OPN4-1 ENSGALG00000041662 10 0.847 - - - 0.847 - - - - - - photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
83. SIX4 ENSGALG00000017389 10 0.846 - - 0.846 - - - - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
84. Sep-02 Sep-02 206 0.842 - - - - - - 0.842 - - -
85. ENSGALG00000023180 ENSGALG00000023180 83 0.841 - - - - - - 0.841 - - -
86. PIRT 41 0.841 - - - - - - - - - 0.841 phosphoinositide-interacting regulator of transient receptor potential channels
87. ETNK1 ENSGALG00000013205 18 0.839 - - - 0.839 - - - - - - ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
88. NCAPD3 ENSGALG00000001491 221 0.839 - - - - - - 0.839 - - - non-SMC condensin II complex subunit D3, transcript variant X3
89. PLXNA4 ENSGALG00000006473 125 0.838 - - - - - - 0.838 - - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
90. BCMO1 BCMO1 35 0.837 - - - - - - - 0.837 - -
91. HES6 ENSGALG00000028415 4830 0.834 - - - - - - - - - 0.834 hes family bHLH transcription factor 6
92. LOC422320 ENSGALG00000007703 6 0.832 - - 0.832 - - - - - - - ligand of Numb protein X 2-like, transcript variant X1
93. EHBP1 654 0.832 - - - - - - 0.832 - - - EH domain binding protein 1, transcript variant X17
94. ARMC7 ENSGALG00000007961 217 0.831 - - - - - - 0.831 - - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
95. HPX ENSGALG00000022586 46 0.826 - - - 0.826 - - - - - - hemopexin [Source:HGNC Symbol;Acc:HGNC:5171]
96. MPHOSPH9 ENSGALG00000003419 227 0.825 - - - - - - 0.825 - - - M-phase phosphoprotein 9 [Source:HGNC Symbol;Acc:HGNC:7215]
97. ELAVL2 ENSGALG00000015799 585 0.824 - - - - - - - - - 0.824 ELAV like RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:3313]
98. SVOP ENSGALG00000034278 27 0.823 - - - 0.823 - - - - - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
99. SLC44A5 ENSGALG00000011379 41 0.823 - - - - - - 0.823 - - - solute carrier family 44 member 5 [Source:HGNC Symbol;Acc:HGNC:28524]
100. WDR86 ENSGALG00000019690 113 0.823 - - - - - - - 0.823 - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA