Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOD3

Gene Name Gene ID Reads Annotation
SOD3 ENSGALG00000018557 16 superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]











Genes with expression patterns similar to SOD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOD3 ENSGALG00000018557 16 4 - - - 1.000 1.000 1.000 - 1.000 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
2. PLD5 ENSGALG00000010737 5 1 - - - - - 1.000 - - - - phospholipase D family member 5 [Source:NCBI gene;Acc:421501]
3. ARHGEF17 6 1 - - - - - 1.000 - - - - Rho guanine nucleotide exchange factor 17
4. CBL ENSGALG00000029077 6 1 - - - - - 1.000 - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
5. SLC30A8 ENSGALG00000034377 3 1 - - - - 1.000 - - - - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
6. RHBDF2 ENSGALG00000001943 1 1 - - - - - 1.000 - - - - rhomboid 5 homolog 2 [Source:HGNC Symbol;Acc:HGNC:20788]
7. PSTPIP1 ENSGALG00000002786 9 1 - - - - - 1.000 - - - - proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
8. MAVS ENSGALG00000040428 1 1 - - - - - 1.000 - - - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
9. FKHR FKHR 1 1 - - - - - 1.000 - - - -
10. TMEM63C ENSGALG00000010406 1 1 - - - - 1.000 - - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
11. KCNS2 ENSGALG00000043764 9 1 - - - - 1.000 - - - - - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
12. NME4 ENSGALG00000002688 1 1 - - - - - 1.000 - - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:NCBI gene;Acc:395915]
13. ENSGALG00000013409 ENSGALG00000013409 4 1 - - - - - 1.000 - - - -
14. SLC6A9 ENSGALG00000010098 5 1 - - - - 1.000 - - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
15. NUDT2 ENSGALG00000027295 15 1 - - - - 1.000 - - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
16. ENSGALG00000028116 ENSGALG00000028116 0 1 - - - - - 1.000 - - - -
17. WFDC2 ENSGALG00000031164 37 1 - - - - - 1.000 - - - - WAP four-disulfide core domain 2 [Source:HGNC Symbol;Acc:HGNC:15939]
18. DNMBP ENSGALG00000007304 4 1 - - - - - 1.000 - - - - dynamin binding protein
19. LDB1 ENSGALG00000007641 2 1 - - - - - 1.000 - - - - LIM domain binding 1 [Source:NCBI gene;Acc:395952]
20. PABPN1L ENSGALG00000006242 3 1 - - - - - 1.000 - - - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
21. LNX1 ENSGALG00000013940 2 1 - - - - 1.000 - - - - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
22. C1H7ORF60 C1H7ORF60 3 1 - - - - - 1.000 - - - -
23. SNORA24 SNORA24 2 1 - - - - - 1.000 - - - -
24. NCK2 ENSGALG00000016799 152 1 - - - - 1.000 - - - - - NCK adaptor protein 2 [Source:NCBI gene;Acc:418727]
25. PPM1F ENSGALG00000039121 26 1 - - - - - 1.000 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
26. SEC16A ENSGALG00000002364 19 1 - - - - - 1.000 - - - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
27. AK5 ENSGALG00000031652 12 1 - - - - 1.000 - - - - - adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]
28. LPP ENSGALG00000007337 18 1 - - - - - 1.000 - - - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
29. KATNAL2 ENSGALG00000041882 1 1 - - - - - 1.000 - - - - katanin catalytic subunit A1 like 2 [Source:HGNC Symbol;Acc:HGNC:25387]
30. AATK ENSGALG00000006901 1 1 - - - - - 1.000 - - - - apoptosis associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:21]
31. ENPP4 ENSGALG00000016708 18 1 - - - - - 1.000 - - - - ectonucleotide pyrophosphatase/phosphodiesterase 4 [Source:NCBI gene;Acc:422055]
32. F-KER ENSGALG00000028706 0 1 - - - - - 1.000 - - - - feather keratin I [Source:NCBI gene;Acc:769269]
33. ENSGALG00000021682 ENSGALG00000021682 0 1 - - - - - 1.000 - - - -
34. RPS6KA2 ENSGALG00000011473 2 1 - - - - - 1.000 - - - - ribosomal protein S6 kinase A2 [Source:HGNC Symbol;Acc:HGNC:10431]
35. TRIM25 ENSGALG00000003144 12 1 - - - - - 1.000 - - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
36. LRP3 ENSGALG00000004853 13 1 - - - - 1.000 - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
37. GAMT ENSGALG00000040182 5 1 - - - - - 1.000 - - - - guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
38. RNF217 ENSGALG00000013651 1 1 - - - - - 1.000 - - - - ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
39. MAGI1 ENSGALG00000007431 23 1 - - - - - 1.000 - - - - membrane associated guanylate kinase, WW and PDZ domain containing 1 [Source:HGNC Symbol;Acc:HGNC:946]
40. LINS LINS 18 1 - - - - 1.000 - - - - -
41. CRBN ENSGALG00000008274 27 1 - - - - 1.000 - - - - - cereblon [Source:HGNC Symbol;Acc:HGNC:30185]
42. IL4 ENSGALG00000006827 2 1 - - - - 1.000 - - - - - interleukin 4 [Source:NCBI gene;Acc:416330]
43. DSCAML1 ENSGALG00000007314 1 1 - - - - - 1.000 - - - - DS cell adhesion molecule like 1 [Source:HGNC Symbol;Acc:HGNC:14656]
44. FAM160A2 ENSGALG00000003416 23 1 - - - - - 1.000 - - - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
45. VPS37D 3 1 - - - - - 1.000 - - - - VPS37D, ESCRT-I subunit
46. CORO6 ENSGALG00000028949 21 1 - - - - - 1.000 - - - - coronin 6 [Source:HGNC Symbol;Acc:HGNC:21356]
47. PPP1R12B ENSGALG00000000336 16 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory subunit 12B [Source:NCBI gene;Acc:395478]
48. FAM83C ENSGALG00000031906 1 1 - - - - 1.000 - - - - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
49. PRKG2 ENSGALG00000010909 1 1 - - - - - 1.000 - - - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
50. NETO1 ENSGALG00000041184 3 1 - - - - 1.000 - - - - - neuropilin and tolloid like 1 [Source:HGNC Symbol;Acc:HGNC:13823]
51. ENSGALG00000027201 ENSGALG00000027201 12 1 - - - - 1.000 - - - - -
52. AFTPH ENSGALG00000008828 21 1 - - - - - 1.000 - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
53. ENSGALG00000002367 ENSGALG00000002367 10 1 - - - - 1.000 - - - - -
54. ZBTB6 ENSGALG00000021570 15 1 - - - - 1.000 - - - - - zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
55. ENSGALG00000023084 ENSGALG00000023084 10 1 - - - - 1.000 - - - - -
56. WDR41 ENSGALG00000004350 16 1 - - - - - 1.000 - - - - WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
57. SGSM1 ENSGALG00000005379 10 1 - - - - 1.000 - - - - - small G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:29410]
58. PPP1R1B ENSGALG00000044406 6 1 - - - - - 1.000 - - - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
59. PTPN3 ENSGALG00000022909 6 1 - - - - - 1.000 - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
60. TMEM189 ENSGALG00000026906 14 1 - - - - - 1.000 - - - - transmembrane protein 189 [Source:NCBI gene;Acc:100538348]
61. STX3 ENSGALG00000035153 1 1 - - - - - 1.000 - - - - syntaxin 3
62. C6orf132 ENSGALG00000028570 1 1 - - - - 1.000 - - - - - chromosome 6 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:21288]
63. gga-mir-10a ENSGALG00000021952 4 1 - - - - - 1.000 - - - - gga-mir-10a [Source:miRBase;Acc:MI0007559]
64. MINPP1 ENSGALG00000003695 1 1 - - - - - 1.000 - - - - multiple inositol-polyphosphate phosphatase 1 [Source:NCBI gene;Acc:395356]
65. C17orf105 C17orf105 11 1 - - - - - 1.000 - - - -
66. STRA8 ENSGALG00000011722 4 1 - - - - - 1.000 - - - - stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
67. MFSD11 ENSGALG00000001777 8 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 11 [Source:HGNC Symbol;Acc:HGNC:25458]
68. GBE ENSGALG00000011859, ENSGALG00000028016 2 1 - - - - - 1.000 - - - - eye-globin, transcript variant X3
69. AGRP ENSGALG00000002244 27 1 - - - - - 1.000 - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
70. ENSGALG00000013079 ENSGALG00000013079 12 1 - - - - - 1.000 - - - -
71. PITPNC1L ENSGALG00000002610 3 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein, cytoplasmic 1-like, transcript variant X2
72. TBX15 0 1 - - - - - 1.000 - - - - T-box 15
73. gga-mir-301a ENSGALG00000029989 5 1 - - - - - 1.000 - - - - gga-mir-301a [Source:miRBase;Acc:MI0001240]
74. SLC26A6 ENSGALG00000026089 3 1 - - - - - 1.000 - - - - solute carrier family 26 member 6 [Source:NCBI gene;Acc:416012]
75. ZNRF2 ENSGALG00000031163 0 1 - - - - - 1.000 - - - - zinc and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:22316]
76. GTF3C3 ENSGALG00000007958 6 1 - - - - - 1.000 - - - - general transcription factor IIIC subunit 3 [Source:NCBI gene;Acc:424052]
77. MNOC MNOC 1 1 - - - - - 1.000 - - - -
78. FARP2 ENSGALG00000005788 6 1 - - - - - 1.000 - - - - FERM, ARH/RhoGEF and pleckstrin domain protein 2 [Source:HGNC Symbol;Acc:HGNC:16460]
79. SLC25A40 ENSGALG00000019662 1 1 - - - - 1.000 - - - - - solute carrier family 25 member 40 [Source:HGNC Symbol;Acc:HGNC:29680]
80. HELIOS HELIOS 2 1 - - - - 1.000 - - - - -
81. ENSGALG00000000307 ENSGALG00000000307 29 1 - - - - 1.000 - - - - -
82. VSTM2A ENSGALG00000041764 2 1 - - - - - 1.000 - - - - V-set and transmembrane domain containing 2A [Source:HGNC Symbol;Acc:HGNC:28499]
83. SMTN 18 1 - - - - 1.000 - - - - - smoothelin, transcript variant X2
84. TMEM163 ENSGALG00000012190 72 1 - - - - - 1.000 - - - - transmembrane protein 163 [Source:HGNC Symbol;Acc:HGNC:25380]
85. SNX8 ENSGALG00000004255 4 1 - - - - - 1.000 - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
86. OVST_1 ENSGALG00000011930 9 1 - - - - - 1.000 - - - - ovostatin [Source:NCBI gene;Acc:396151]
87. RQCD1 RQCD1 110 1 - - - - 1.000 - - - - -
88. CARF ENSGALG00000008474 6 1 - - - - - 1.000 - - - - calcium responsive transcription factor [Source:HGNC Symbol;Acc:HGNC:14435]
89. ERI3 ENSGALG00000010106 995 1 - - - - - 1.000 - - - - ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:HGNC:17276]
90. HID1 ENSGALG00000007808 2 1 - - - - - 1.000 - - - - HID1 domain containing [Source:HGNC Symbol;Acc:HGNC:15736]
91. MMP11 ENSGALG00000005968 3 1 - - - - 1.000 - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
92. SP-A SP-A 9 1 - - - - - 1.000 - - - -
93. AK4 ENSGALG00000011035 9 1 - - - - - 1.000 - - - - adenylate kinase 4 [Source:HGNC Symbol;Acc:HGNC:363]
94. BAFF BAFF 40 1 - - - - - 1.000 - - - -
95. MFSD6 ENSGALG00000041884 1 1 - - - - - 1.000 - - - - major facilitator superfamily domain containing 6 [Source:HGNC Symbol;Acc:HGNC:24711]
96. METTL24 ENSGALG00000041120 60 0.992 - - - - - - - 0.992 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
97. ENSGALG00000026913 ENSGALG00000026913 12 0.992 - - - - - - - 0.992 - -
98. AVP ENSGALG00000014117 19 0.992 - - - - - - - 0.992 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
99. TGM4 ENSGALG00000033171 19 0.991 - - - - - - - 0.991 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
100. WNT16 ENSGALG00000028069 157 0.991 - - - - - - - 0.991 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]

There are 249 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA