Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOD2

Gene Name Gene ID Reads Annotation
SOD2 ENSGALG00000011661 13178 superoxide dismutase 2 [Source:NCBI gene;Acc:374042]











Genes with expression patterns similar to SOD2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOD2 ENSGALG00000011661 13178 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
2. ENSGALG00000027854 ENSGALG00000027854 5007 1.921 - - - - - - 0.962 0.959 - -
3. TRAM1 ENSGALG00000041112 22876 1.918 - - - - 0.977 - 0.941 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
4. MAP1LC3A ENSGALG00000038721 2230 1.904 - - - - 0.983 - 0.921 - - - microtubule associated protein 1 light chain 3 alpha
5. EIF4G3 ENSGALG00000010084 5881 1.898 - - - - 0.976 - 0.922 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
6. ANXA11 ENSGALG00000043826 5189 1.876 - - - - 0.973 - - 0.903 - - annexin A11 [Source:NCBI gene;Acc:423637]
7. DYNC1LI1 ENSGALG00000011491 11011 1.876 - - - - 0.957 - 0.919 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
8. LAP3 ENSGALG00000006334 21076 1.876 - - - - 0.947 - 0.929 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
9. PPIF ENSGALG00000004809 5586 1.872 - - - - - - 0.939 0.933 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
10. ALDH4A1 ENSGALG00000042184 9432 1.848 - - - - - - 0.899 0.949 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
11. BCCIP ENSGALG00000006617 13291 1.824 - - 0.893 - 0.931 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
12. MSRA ENSGALG00000028032 2607 1.82 - - 0.886 - - - 0.934 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
13. FOPNL ENSGALG00000006532 2922 1.808 - - 0.851 - - - - 0.957 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
14. NIPSNAP3L ENSGALG00000027334 7514 1.787 - - 0.830 - - - - 0.957 - - nipsnap homolog 3-like
15. C5H14ORF166 C5H14ORF166 24176 1.786 - - 0.895 - 0.891 - - - - -
16. GTF2E1 ENSGALG00000042320 7712 1.779 - - - - - - 0.829 0.950 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
17. ROR1 ENSGALG00000011019 2155 1.754 - - 0.800 - - - - 0.954 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
18. METTL11A METTL11A 11876 1.739 - - 0.795 - - - 0.944 - - -
19. DECR1 ENSGALG00000036990 6360 1.733 - - 0.769 - 0.964 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
20. MRPL19 ENSGALG00000016731 22670 1.733 - - - - 0.844 - 0.889 - - - mitochondrial ribosomal protein L19, transcript variant X1
21. SH3GLB1 ENSGALG00000006284 12764 1.722 - - 0.744 - 0.978 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
22. NOL12 ENSGALG00000012410 5658 1.714 - - - - 0.985 - - - - 0.729 nucleolar protein 12
23. BTAF1 ENSGALG00000030598 3556 1.711 - - 0.784 - - - 0.927 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
24. RBM5 30998 1.71 - - 0.754 - 0.956 - - - - - RNA binding motif protein 5, transcript variant X1
25. ASPM ENSGALG00000032398 12784 1.708 - - 0.737 - 0.971 - - - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
26. SCRN1 ENSGALG00000011176 3783 1.705 - - 0.764 - - - 0.941 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
27. EIF3J ENSGALG00000008187 43570 1.673 - - - - 0.941 - - 0.732 - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
28. COX7A2L ENSGALG00000037996 13646 1.658 - - 0.740 - - - 0.918 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
29. PSMG3 ENSGALG00000004203 11240 1.657 - - 0.752 - - - 0.905 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
30. PTDSS1 ENSGALG00000030185 5515 1.631 - - 0.812 - - - 0.819 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
31. SLC25A14 ENSGALG00000004063 5574 1.623 - - 0.733 - - - 0.890 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
32. RBM19 ENSGALG00000008289 10702 1.619 - - 0.905 - - - - 0.714 - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
33. PUM2 ENSGALG00000016481 23625 1.609 - - 0.803 - 0.806 - - - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
34. KARS ENSGALG00000000907 51247 1.599 - - 0.843 - - - 0.756 - - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
35. PEBP1 ENSGALG00000007403 77502 1.566 - - - - 0.724 - 0.842 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
36. TALDO1 ENSGALG00000037195 30673 1.519 - - 0.717 - - - 0.802 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
37. NFS1 ENSGALG00000001568 7113 1.456 - - 0.705 - - - 0.751 - - - NFS1, cysteine desulfurase [Source:NCBI gene;Acc:419133]
38. TIMM21 ENSGALG00000013709 3215 0.987 - - - - 0.987 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
39. MXD4 ENSGALG00000015688 1472 0.987 - - - - 0.987 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
40. GPALPP1 ENSGALG00000031567 4221 0.987 - - - - 0.987 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
41. PDXP ENSGALG00000023131 2663 0.987 - - - - 0.987 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
42. CDR2L ENSGALG00000026295 4142 0.987 - - - - 0.987 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
43. RBM15B 5416 0.987 - - - - 0.987 - - - - - RNA binding motif protein 15B
44. CRIPT ENSGALG00000010014 4311 0.987 - - - - 0.987 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
45. AEN ENSGALG00000044204 2633 0.987 - - - - 0.987 - - - - - apoptosis enhancing nuclease, transcript variant X1
46. FOCAD ENSGALG00000015071 3677 0.986 - - - - 0.986 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
47. MAP3K13 ENSGALG00000006655 632 0.986 - - - - 0.986 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
48. PCIF1 ENSGALG00000023547 867 0.986 - - - - 0.986 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
49. TMEM65 ENSGALG00000037371 776 0.986 - - - - 0.986 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
50. ENSGALG00000005720 ENSGALG00000005720 1666 0.986 - - - - 0.986 - - - - -
51. DARS ENSGALG00000012355 2887 0.985 - - - - 0.985 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
52. CLSPN ENSGALG00000002346 2590 0.985 - - - - 0.985 - - - - - claspin [Source:NCBI gene;Acc:428223]
53. KDM1A ENSGALG00000033469 20632 0.985 - - - - 0.985 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
54. RHBDF1 ENSGALG00000007434 2359 0.985 - - - - 0.985 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
55. PIK3CD ENSGALG00000002583 1036 0.985 - - - - 0.985 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
56. KAT6A ENSGALG00000003641 2631 0.985 - - - - 0.985 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
57. FBXW7 ENSGALG00000010103 5982 0.984 - - - - 0.984 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
58. HABP4 ENSGALG00000012628 2894 0.984 - - - - 0.984 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
59. ITPK1 ENSGALG00000034898 4212 0.984 - - - - 0.984 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
60. CSNK1E ENSGALG00000032257 2165 0.984 - - - - 0.984 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
61. C9orf89 C9orf89 3056 0.984 - - - - 0.984 - - - - -
62. COPG2 ENSGALG00000008144 4542 0.984 - - - - 0.984 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
63. FAM18B1 ENSGALG00000001335 5177 0.984 - - - - 0.984 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
64. LSMD1 LSMD1 2562 0.983 - - - - 0.983 - - - - -
65. MTG1 ENSGALG00000003549 5032 0.983 - - - - 0.983 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
66. NMT1 ENSGALG00000000857 5770 0.983 - - - - 0.983 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
67. AIP ENSGALG00000040247 4166 0.982 - - - - 0.982 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
68. BTBD7 4136 0.982 - - - - 0.982 - - - - - BTB domain containing 7, transcript variant X2
69. ADSL ENSGALG00000012034 10280 0.982 - - - - 0.982 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
70. CNOT2 ENSGALG00000010042 7612 0.982 - - - - 0.982 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
71. PAXIP1 ENSGALG00000036064 3120 0.982 - - - - 0.982 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
72. gga-mir-1778 ENSGALG00000025181 8765 0.981 - - - - 0.981 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
73. ZNF326 ENSGALG00000006113 15141 0.981 - - - - 0.981 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
74. TDRD3 ENSGALG00000016936 3412 0.981 - - - - 0.981 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
75. SRP68 ENSGALG00000002062 7370 0.981 - - - - 0.981 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
76. GLB1L2 ENSGALG00000001604 4057 0.981 - - - - 0.981 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
77. TMEM167A ENSGALG00000027332 13862 0.98 - - - - 0.980 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
78. SNF8 ENSGALG00000001309 7398 0.98 - - - - - - - 0.980 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
79. B4GAL-T7 B4GAL-T7 12356 0.98 - - - - 0.980 - - - - -
80. TXNDC9 ENSGALG00000032090 6804 0.979 - - - - 0.979 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
81. SUGT1 ENSGALG00000016946 22881 0.979 - - - - 0.979 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
82. MANF ENSGALG00000002362 7518 0.979 - - - - 0.979 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
83. WSB2 ENSGALG00000008151 13246 0.978 - - - - 0.978 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
84. OCIAD1 ENSGALG00000014081 12065 0.975 - - - - 0.975 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
85. TIA1 ENSGALG00000013879 16330 0.975 - - - - 0.975 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
86. MAP2K4 ENSGALG00000032178 5982 0.975 - - - - 0.975 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
87. SDF4 ENSGALG00000001872 6382 0.974 - - - - - - 0.974 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
88. RSU1 ENSGALG00000040891 12561 0.974 - - - - 0.974 - - - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
89. LFNG ENSGALG00000038515 5178 0.974 - - - - 0.974 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
90. MRPL32 ENSGALG00000037258 6861 0.973 - - - - 0.973 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
91. SMS ENSGALG00000016379 11607 0.973 - - - - 0.973 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
92. MPPED1 ENSGALG00000014186 5726 0.972 - - - - 0.972 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
93. TLK1 ENSGALG00000009569 5446 0.971 - - - - 0.971 - - - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
94. TM9SF3 ENSGALG00000005534 15290 0.971 - - - - - - 0.971 - - - transmembrane 9 superfamily member 3
95. SFRP2 ENSGALG00000009241 4716 0.97 - - - - 0.970 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
96. DRG1 ENSGALG00000006921 10791 0.97 - - - - 0.970 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
97. WDR36 ENSGALG00000000247 11277 0.969 - - - - 0.969 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
98. NDUFA9 ENSGALG00000017282 14358 0.969 - - - - - - 0.969 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
99. UTP15 ENSGALG00000013510 13122 0.969 - - - - 0.969 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
100. COPA ENSGALG00000009153 11618 0.969 - - - - 0.969 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]

There are 598 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA