Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOCS1

Gene Name Gene ID Reads Annotation
SOCS1 ENSGALG00000007158 14 suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]











Genes with expression patterns similar to SOCS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOCS1 ENSGALG00000007158 14 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 suppressor of cytokine signaling 1 [Source:NCBI gene;Acc:416630]
2. KLHL33 ENSGALG00000027742 18 1.942 - - 0.942 - - - - 1.000 - - kelch like family member 33, transcript variant X2
3. FAM180A ENSGALG00000028459 14 1.749 - - 0.749 - - - - 1.000 - - family with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
4. AIDA ENSGALG00000009426 219 1.71 - - - - - - - 0.944 - 0.766 axin interactor, dorsalization associated [Source:NCBI gene;Acc:421335]
5. RREB1 ENSGALG00000012799 125 1.703 - - - - - - - 0.941 - 0.762 ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
6. MEGF10 ENSGALG00000014699 248 1.676 - - - - - - - 0.928 - 0.748 multiple EGF like domains 10 [Source:HGNC Symbol;Acc:HGNC:29634]
7. SLC26A5 ENSGALG00000008222 3 1.627 - - - 0.783 - - - - - 0.844 solute carrier family 26 member 5 [Source:NCBI gene;Acc:417715]
8. AMOTL1 ENSGALG00000017208 5 1.507 - - - 0.783 - - - - - 0.724 angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
9. ENSGALG00000008449 ENSGALG00000008449 865 1 - - - - - - - 1.000 - -
10. PTPN22 ENSGALG00000021656 1 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, non-receptor type 22 [Source:HGNC Symbol;Acc:HGNC:9652]
11. ENSGALG00000027180 ENSGALG00000027180 1 1 - - - - - - - 1.000 - -
12. PDZD3 ENSGALG00000006779 24 1 - - - - - - - 1.000 - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
13. ENSGALG00000001552 ENSGALG00000001552 4 1 - - - - - - - 1.000 - -
14. SNORA50 SNORA50 9 1 - - - - - - - 1.000 - -
15. KLHL23 ENSGALG00000020737 13 1 - - - - - - - 1.000 - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
16. CCBL1 22 1 - - - - - - - 1.000 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
17. UBE2J1 ENSGALG00000015775 13 1 - - - - - - - 1.000 - - ubiquitin conjugating enzyme E2 J1 [Source:NCBI gene;Acc:395528]
18. ENSGALG00000006003 ENSGALG00000006003 11 1 - - - - - - - 1.000 - -
19. KCNK10 ENSGALG00000010598 7 1 - - - - - - - 1.000 - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
20. AFF1 ENSGALG00000043935 34 1 - - - - - - - 1.000 - - AF4/FMR2 family member 1 [Source:HGNC Symbol;Acc:HGNC:7135]
21. PEAK1 ENSGALG00000002759 39 1 - - - - - - - 1.000 - - pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
22. STON2 ENSGALG00000010579 76 0.998 - - - - - - - 0.998 - - stonin 2 [Source:HGNC Symbol;Acc:HGNC:30652]
23. LRRC55 ENSGALG00000029130 21 0.998 - - - - - - - 0.998 - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
24. CDH7 ENSGALG00000013782 11 0.998 - - - - - - - 0.998 - - cadherin 7 [Source:NCBI gene;Acc:374007]
25. FAM184B ENSGALG00000041854 43 0.998 - - - - - - - 0.998 - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
26. SRGN ENSGALG00000004167 77 0.998 - - - - - - - 0.998 - - serglycin [Source:HGNC Symbol;Acc:HGNC:9361]
27. TRPV1 ENSGALG00000004649 17 0.998 - - - - - - - 0.998 - - transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
28. ENSGALG00000003817 ENSGALG00000003817 45 0.992 - - - - - - - 0.992 - -
29. RASGRP1 ENSGALG00000009740 15 0.987 - - - - - - - 0.987 - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
30. CHTL1A CHTL1A 79 0.967 - - - - - - - 0.967 - -
31. POMGNT2 ENSGALG00000011518 36 0.963 - - - - - - - - - 0.963 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
32. SLC14A2 SLC14A2 4 0.958 - - - - - - - 0.958 - -
33. LPP ENSGALG00000007337 18 0.955 - - - - - - - 0.955 - - LIM domain containing preferred translocation partner in lipoma [Source:NCBI gene;Acc:429148]
34. NQO1 ENSGALG00000023437 13 0.95 - - - - - - - 0.950 - - NAD(P)H quinone dehydrogenase 1 [Source:NCBI gene;Acc:769737]
35. MCC ENSGALG00000000208 61 0.95 - - - - - - - 0.950 - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
36. ENSGALG00000006724 ENSGALG00000006724 74 0.95 - - - - - - - 0.950 - -
37. MAP7D1 ENSGALG00000021634 457 0.944 - - - - - - - 0.944 - - MAP7 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25514]
38. P4HA3 ENSGALG00000042030 826 0.943 - - - - - - - 0.943 - - prolyl 4-hydroxylase subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:30135]
39. ENSGALG00000011273 ENSGALG00000011273 9 0.942 - - 0.942 - - - - - - -
40. ENSGALG00000022206 ENSGALG00000022206 2 0.942 - - 0.942 - - - - - - -
41. ENSGALG00000028102 ENSGALG00000028102 8 0.942 - - 0.942 - - - - - - -
42. LOC425001 ENSGALG00000009468 7 0.942 - - 0.942 - - - - - - - uncharacterized LOC425001, transcript variant X2
43. LOC771085 ENSGALG00000016802 1 0.942 - - 0.942 - - - - - - - pinopsin-like, transcript variant X1
44. ENSGALG00000025997 ENSGALG00000025997 1 0.942 - - 0.942 - - - - - - -
45. CPSF4L ENSGALG00000004441 4 0.942 - - 0.942 - - - - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
46. PLA2G4EL6 ENSGALG00000020458 4 0.942 - - 0.942 - - - - - - - phospholipase A2 group IVE-like 6
47. GLUL ENSGALG00000043754 71 0.928 - - - - - - - 0.928 - - glutamate-ammonia ligase [Source:NCBI gene;Acc:396489]
48. LARP6 ENSGALG00000004046 97 0.925 - - - - - - - 0.925 - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
49. CBX4 ENSGALG00000035911 105 0.923 - - - - - - - 0.923 - - chromobox 4 [Source:NCBI gene;Acc:395354]
50. TNFSF10 ENSGALG00000009179 226 0.92 - - - - - - - 0.920 - - tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
51. CHAC2 ENSGALG00000008182 15 0.908 - - - - - - - 0.908 - - ChaC cation transport regulator homolog 2 [Source:NCBI gene;Acc:421221]
52. AMHR2 ENSGALG00000012055 55 0.901 - - - - - - - 0.901 - - anti-Mullerian hormone receptor, type II, transcript variant X1
53. HGSNAT ENSGALG00000010136 18 0.901 - - - - - - - 0.901 - - heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:26527]
54. TSPAN9 ENSGALG00000014346 228 0.899 - - - - - - - 0.899 - - tetraspanin 9 [Source:HGNC Symbol;Acc:HGNC:21640]
55. SIL1 ENSGALG00000002457 147 0.897 - - - - - - - 0.897 - - SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
56. SAMD15 ENSGALG00000010457 69 0.893 - - - - - - - - - 0.893 sterile alpha motif domain containing 15
57. CRBN ENSGALG00000008274 27 0.888 - - - - - - - - - 0.888 cereblon [Source:HGNC Symbol;Acc:HGNC:30185]
58. SLC22A18 ENSGALG00000006454 24 0.885 - - 0.885 - - - - - - - solute carrier family 22 member 18 [Source:HGNC Symbol;Acc:HGNC:10964]
59. TSPAN4 ENSGALG00000006837 150 0.884 - - - - - - - - - 0.884 tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
60. ENSGALG00000018358 ENSGALG00000018358 101 0.88 - - - - - - - 0.880 - -
61. RXFP1 ENSGALG00000009429 10 0.879 - - - - - - - 0.879 - - relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
62. NIPA1 ENSGALG00000039811 20 0.876 - - - - - - - - - 0.876 NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
63. ENSGALG00000024441 ENSGALG00000024441 66 0.873 - - 0.873 - - - - - - -
64. STXBP5 ENSGALG00000012336 20 0.87 - - - - - - - - - 0.870 syntaxin binding protein 5 [Source:HGNC Symbol;Acc:HGNC:19665]
65. AKAP13 ENSGALG00000006840 521 0.866 - - - - - - - 0.866 - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
66. RUSC2 ENSGALG00000002371 272 0.864 - - - - - - - 0.864 - - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
67. C1QTNF2 ENSGALG00000027232 42 0.862 - - - - - - - 0.862 - - C1q and tumor necrosis factor related protein 2 [Source:NCBI gene;Acc:416156]
68. MCM9 ENSGALG00000014883 8 0.86 - - 0.860 - - - - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
69. CHIC2 ENSGALG00000013931 21 0.859 - - - - - - - 0.859 - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
70. IRF2BP2 ENSGALG00000010996 11 0.858 - - - - - - - 0.858 - - interferon regulatory factor 2 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21729]
71. KSR1 ENSGALG00000005685 78 0.855 - - - - - 0.855 - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
72. PKDCCB ENSGALG00000011166 74 0.854 - - 0.854 - - - - - - - protein kinase domain containing, cytoplasmic b
73. SNORA74 SNORA74 8 0.852 - - 0.852 - - - - - - -
74. ETS2 ENSGALG00000016059 271 0.851 - - - - - - - 0.851 - - ETS proto-oncogene 2, transcription factor [Source:NCBI gene;Acc:396250]
75. SYNPO ENSGALG00000027330 5 0.85 - - 0.850 - - - - - - - synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]
76. FGF1 ENSGALG00000031255 26 0.848 - - - - - - - 0.848 - - fibroblast growth factor 1 [Source:NCBI gene;Acc:396094]
77. ZNF414 ENSGALG00000024378 962 0.847 - - - - - - - 0.847 - - zinc finger protein 414 [Source:HGNC Symbol;Acc:HGNC:20630]
78. ENSGALG00000021386 ENSGALG00000021386 29 0.844 - - - - - - - - - 0.844
79. ENSGALG00000010883 ENSGALG00000010883 10 0.844 - - - - - - - - - 0.844
80. PGR ENSGALG00000017195 2 0.844 - - - - - - - - - 0.844 progesterone receptor [Source:NCBI gene;Acc:396198]
81. UGT2A1 ENSGALG00000011805 2 0.844 - - - - - - - - - 0.844 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus, transcript variant X3
82. ENSGALG00000013409 ENSGALG00000013409 4 0.844 - - - - - - - - - 0.844
83. CNTNAP5 ENSGALG00000011577 2 0.844 - - - - - - - - - 0.844 contactin associated protein like 5 [Source:NCBI gene;Acc:424231]
84. ENSGALG00000023012 ENSGALG00000023012 2 0.844 - - - - - - - - - 0.844
85. FOLH1 ENSGALG00000017234 9 0.844 - - - - - - - - - 0.844 folate hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3788]
86. LASP1 ENSGALG00000039299 138 0.844 - - 0.844 - - - - - - - LIM and SH3 protein 1 [Source:NCBI gene;Acc:420002]
87. SLC22A15 ENSGALG00000015016 12 0.844 - - - - - - - - - 0.844 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
88. ATXN1 ENSGALG00000012709 2 0.844 - - - - - - - - - 0.844 ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
89. gga-mir-1556 ENSGALG00000025512 2 0.844 - - - - - - - - - 0.844 gga-mir-1556 [Source:miRBase;Acc:MI0007281]
90. IL1RAPL1 ENSGALG00000016288 102 0.839 - - - - - - - - - 0.839 interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]
91. ENSGALG00000008822 ENSGALG00000008822 221 0.839 - - - - - - - - - 0.839
92. PMEPA1 ENSGALG00000037780 349 0.833 - - - - - - - 0.833 - - prostate transmembrane protein, androgen induced 1 [Source:NCBI gene;Acc:428166]
93. ESYT3 ENSGALG00000012092 13 0.832 - - - - - - - 0.832 - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
94. ZNFX1 ENSGALG00000004859 33 0.832 - - - - - - - - - 0.832 zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
95. ENSGALG00000028962 ENSGALG00000028962 7 0.831 - - 0.831 - - - - - - -
96. C1orf74 ENSGALG00000001378 39 0.831 - - - - - - - 0.831 - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
97. NR2C2 ENSGALG00000008519 28 0.829 - - - - - - - 0.829 - - nuclear receptor subfamily 2 group C member 2 [Source:HGNC Symbol;Acc:HGNC:7972]
98. PPARG ENSGALG00000004974 62 0.829 - - - - - - - 0.829 - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
99. ENSGALG00000028367 ENSGALG00000028367 102 0.826 - - - - - - - - - 0.826
100. PALM2 ENSGALG00000015655 20 0.826 - - - - - - - - - 0.826 paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]

There are 147 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA