Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SOBP

Gene Name Gene ID Reads Annotation
SOBP ENSGALG00000043047 147 sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]











Genes with expression patterns similar to SOBP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SOBP ENSGALG00000043047 147 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
2. UBN1 ENSGALG00000031416 2848 1.678 - - 0.903 - 0.775 - - - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
3. HAGH ENSGALG00000005398 168 1.564 - - - - 0.805 0.759 - - - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
4. NUMBL ENSGALG00000016508 12 0.991 - - - - - 0.991 - - - - numb homolog (Drosophila)-like, transcript variant X2
5. ATP10D ENSGALG00000014192 94 0.986 - - 0.986 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
6. CDC14B ENSGALG00000012627 110 0.984 - - 0.984 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
7. ENSGALG00000028964 ENSGALG00000028964 46 0.984 - - 0.984 - - - - - - -
8. MRC2 ENSGALG00000000461 48 0.984 - - 0.984 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
9. GTF2H2 ENSGALG00000002399 2361 0.984 - - 0.984 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
10. ITGB4 ENSGALG00000002389 44 0.984 - - 0.984 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
11. IFT81 ENSGALG00000003854 2534 0.984 - - 0.984 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
12. SLC3A1 ENSGALG00000009973 608 0.984 - - 0.984 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
13. TDRD6 48 0.984 - - 0.984 - - - - - - - tudor domain containing 6
14. RQCD1 RQCD1 110 0.984 - - 0.984 - - - - - - -
15. AKAP10 ENSGALG00000004679 103 0.983 - - 0.983 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
16. GFER ENSGALG00000005579 1367 0.983 - - 0.983 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
17. UEVLD ENSGALG00000006342 164 0.983 - - 0.983 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
18. APTX ENSGALG00000001954 692 0.983 - - 0.983 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
19. FBXL5 ENSGALG00000014510 245 0.982 - - 0.982 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
20. ENSGALG00000020103 ENSGALG00000020103 64 0.982 - - 0.982 - - - - - - -
21. U4 U4 69 0.982 - - 0.982 - - - - - - -
22. CLEC16A ENSGALG00000007167 66 0.982 - - 0.982 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
23. ENSGALG00000004703 ENSGALG00000004703 112 0.982 - - 0.982 - - - - - - -
24. TCTN2 ENSGALG00000023683 3596 0.982 - - 0.982 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
25. MED12 ENSGALG00000036322 814 0.982 - - 0.982 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
26. ENSGALG00000002020 ENSGALG00000002020 183 0.982 - - 0.982 - - - - - - -
27. SZT2 ENSGALG00000028561 255 0.982 - - 0.982 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
28. NXPE3 ENSGALG00000015344 111 0.981 - - 0.981 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
29. OSGIN2 ENSGALG00000042840 83 0.981 - - 0.981 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
30. PTDSS2 ENSGALG00000004300 682 0.981 - - 0.981 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
31. AKT3 ENSGALG00000034081 866 0.98 - - 0.980 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
32. F2R ENSGALG00000014983 106 0.98 - - 0.980 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
33. RPS6KB1 ENSGALG00000005198 169 0.979 - - 0.979 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
34. L3MBTL3 ENSGALG00000034030 113 0.979 - - 0.979 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
35. RAD54L2 ENSGALG00000003243 187 0.979 - - 0.979 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
36. ABCC3 ENSGALG00000007522 340 0.979 - - 0.979 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
37. TRIM13 ENSGALG00000017011 92 0.979 - - 0.979 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
38. BBS5 ENSGALG00000009846 344 0.978 - - 0.978 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
39. BRINP3 ENSGALG00000033407 40 0.978 - - - - - 0.978 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
40. DBN1 ENSGALG00000033405 216 0.978 - - 0.978 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
41. ITM2B ENSGALG00000016996 1112 0.978 - - 0.978 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
42. SMARCAD1 ENSGALG00000037339 149 0.978 - - 0.978 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
43. ADK ENSGALG00000005057 199 0.977 - - 0.977 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
44. GDPD4 ENSGALG00000000690 824 0.976 - - 0.976 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
45. LRRC42 ENSGALG00000010743 384 0.976 - - 0.976 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
46. CHAMP1 ENSGALG00000016813 508 0.976 - - 0.976 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
47. LRRC71 ENSGALG00000027351 695 0.976 - - 0.976 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
48. ATF7IP ENSGALG00000011814 1571 0.974 - - 0.974 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
49. MLLT3 ENSGALG00000015078 502 0.974 - - 0.974 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
50. WHSC1 1712 0.973 - - 0.973 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
51. PRUNE PRUNE 452 0.973 - - 0.973 - - - - - - -
52. KCTD3 ENSGALG00000009678 335 0.973 - - 0.973 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
53. FAM134C 860 0.972 - - 0.972 - - - - - - - family with sequence similarity 134 member C
54. RALGDS ENSGALG00000003412 4478 0.972 - - 0.972 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
55. ATP8B4 ENSGALG00000002326 456 0.971 - - 0.971 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
56. RECQL ENSGALG00000013174 1323 0.969 - - 0.969 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
57. IFT57 ENSGALG00000015356 5540 0.969 - - 0.969 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
58. ABCE1 ENSGALG00000009961 958 0.969 - - 0.969 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
59. TUBGCP3 ENSGALG00000016836 332 0.969 - - 0.969 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
60. RFK ENSGALG00000033558 1364 0.968 - - 0.968 - - - - - - - riboflavin kinase, transcript variant X3
61. TTPAL ENSGALG00000004244 2734 0.968 - - 0.968 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
62. PCYT1B 190 0.968 - - 0.968 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
63. BBX ENSGALG00000015353 1281 0.968 - - 0.968 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
64. AASDHPPT ENSGALG00000027981 1017 0.967 - - 0.967 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
65. NACAD 679 0.967 - - 0.967 - - - - - - - NAC alpha domain containing, transcript variant X1
66. SHMT1 ENSGALG00000005046 1430 0.965 - - 0.965 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
67. RRN3 ENSGALG00000041989 3934 0.965 - - 0.965 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
68. CEP104 ENSGALG00000000978 1130 0.964 - - 0.964 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
69. TMEM242 ENSGALG00000013689 377 0.964 - - 0.964 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
70. CHGA ENSGALG00000010820 1028 0.964 - - 0.964 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
71. NGF ENSGALG00000002556 122 0.963 - - 0.963 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
72. ENSGALG00000008689 ENSGALG00000008689 232 0.962 - - 0.962 - - - - - - -
73. WAPAL WAPAL 625 0.96 - - 0.960 - - - - - - -
74. SETD1B ENSGALG00000004324 2897 0.96 - - 0.960 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
75. PIGK ENSGALG00000009015 7942 0.958 - - 0.958 - - - - - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
76. SLC37A3 ENSGALG00000012849 836 0.958 - - 0.958 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
77. PCDH17 ENSGALG00000016941 1006 0.957 - - 0.957 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
78. SNN ENSGALG00000028876 1687 0.956 - - 0.956 - - - - - - - stannin [Source:NCBI gene;Acc:416429]
79. MTHFSD ENSGALG00000033322 824 0.956 - - 0.956 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
80. CTNS ENSGALG00000004628 1358 0.956 - - 0.956 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
81. RTFDC1 ENSGALG00000007709 1727 0.956 - - 0.956 - - - - - - - replication termination factor 2 domain containing 1 [Source:NCBI gene;Acc:419329]
82. SMOC2 ENSGALG00000011205 340 0.956 - - 0.956 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
83. AMBRA1 ENSGALG00000008358 2865 0.955 - - 0.955 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
84. HYAL3 ENSGALG00000029000 712 0.955 - - 0.955 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
85. WDR92 ENSGALG00000008760 3934 0.955 - - 0.955 - - - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
86. CENPO ENSGALG00000016609 1699 0.955 - - 0.955 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
87. ARRDC4 ENSGALG00000007012 1039 0.954 - - 0.954 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
88. MED15 ENSGALG00000006430 814 0.953 - - 0.953 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
89. GGT7 ENSGALG00000001062 476 0.953 - - 0.953 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
90. DDX6 ENSGALG00000033064 2193 0.953 - - 0.953 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
91. C18orf8 C18orf8 1512 0.952 - - 0.952 - - - - - - -
92. UHRF2 ENSGALG00000015052 1268 0.952 - - 0.952 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
93. CA9 ENSGALG00000021340 1431 0.951 - - 0.951 - - - - - - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
94. IQCD ENSGALG00000037307 642 0.951 - - 0.951 - - - - - - - IQ motif containing D, transcript variant X2
95. RALGAPA2 240 0.951 - - 0.951 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
96. SLK ENSGALG00000008318 2220 0.951 - - 0.951 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
97. SS18L1 ENSGALG00000005145 14 0.951 - - - - - 0.951 - - - - SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
98. HPS5 ENSGALG00000027716 2466 0.949 - - 0.949 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
99. VPS13D ENSGALG00000034777 2350 0.947 - - 0.947 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
100. PCYOX1 ENSGALG00000013878 2200 0.946 - - 0.946 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]

There are 572 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA