Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX9

Gene Name Gene ID Reads Annotation
SNX9 ENSGALG00000013710 5295 sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]











Genes with expression patterns similar to SNX9

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX9 ENSGALG00000013710 5295 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 9 [Source:HGNC Symbol;Acc:HGNC:14973]
2. AMD1 ENSGALG00000039575 8900 1.668 - - - - - - 0.742 0.926 - - adenosylmethionine decarboxylase 1 [Source:NCBI gene;Acc:421755]
3. COPS2 ENSGALG00000000404 8980 1.647 - - - - - - 0.761 0.886 - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
4. RAD23B ENSGALG00000015540 10828 1.642 - - - - - - 0.703 0.939 - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
5. MOSPD1 ENSGALG00000006132 8503 1.496 - - - 0.724 - - 0.772 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
6. MCCC2L ENSGALG00000011255 889 1.483 - - - 0.758 - - - - 0.725 - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
7. IDI1 ENSGALG00000006723 7761 1.466 - - - 0.711 - - 0.755 - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
8. CACYBP ENSGALG00000004554 7320 1.452 - - - 0.712 - - 0.740 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
9. CANX ENSGALG00000032148 11297 1.432 - - - 0.712 - - 0.720 - - - calnexin [Source:NCBI gene;Acc:416288]
10. CHCHD3 ENSGALG00000006489 18592 1.42 - - - 0.712 - - 0.708 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
11. ANKRD10 ENSGALG00000030125 3611 0.984 - - - - - - - 0.984 - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
12. AP1B1 ENSGALG00000042213 4828 0.974 - - - - - - - 0.974 - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
13. MBNL3 ENSGALG00000032045 10980 0.972 - - - - - - - 0.972 - - muscleblind like splicing regulator 3 [Source:NCBI gene;Acc:422233]
14. NHP2L1 NHP2L1 12124 0.969 - - - - - - - 0.969 - -
15. PSMC3 ENSGALG00000008108 22922 0.951 - - - - - - - 0.951 - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
16. DDX18 ENSGALG00000012147 12463 0.947 - - - - - - - 0.947 - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
17. POLE3 ENSGALG00000008873 9161 0.934 - - - - - - - 0.934 - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
18. MRE11A MRE11A 5754 0.922 - - - - - - - 0.922 - -
19. RPAIN ENSGALG00000001666 2676 0.92 - - - - - - - 0.920 - - RPA interacting protein [Source:HGNC Symbol;Acc:HGNC:28641]
20. ANKRD46 ENSGALG00000041445 3791 0.92 - - - - - - - 0.920 - - ankyrin repeat domain 46, transcript variant X1
21. ACTA1 ENSGALG00000011086 2543 0.92 - - - - - - - 0.920 - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
22. VPRBP VPRBP 4037 0.92 - - - - - - - 0.920 - -
23. NCAPG2 ENSGALG00000006525 2319 0.92 - - - - - - - 0.920 - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
24. SETD9 ENSGALG00000014719 5081 0.92 - - - - - - - 0.920 - - SET domain containing 9, transcript variant X2
25. TUBD1 ENSGALG00000005173 1364 0.919 - - - - - - - 0.919 - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
26. ZNF318 ENSGALG00000034040 1758 0.919 - - - - - - - 0.919 - - zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
27. LAMA5 486 0.919 - - - - - - - 0.919 - - laminin subunit alpha 5, transcript variant X3
28. SGCB ENSGALG00000013968 3214 0.919 - - - - - - - 0.919 - - sarcoglycan beta [Source:NCBI gene;Acc:422760]
29. CENPJ ENSGALG00000017148 1415 0.919 - - - - - - - 0.919 - - centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
30. BYSL ENSGALG00000003467 7555 0.919 - - - - - - - 0.919 - - bystin like [Source:HGNC Symbol;Acc:HGNC:1157]
31. RNF19B ENSGALG00000039716 662 0.919 - - - - - - - 0.919 - - ring finger protein 19B [Source:HGNC Symbol;Acc:HGNC:26886]
32. CNTRL ENSGALG00000001513 1773 0.919 - - - - - - - 0.919 - - centriolin [Source:NCBI gene;Acc:417121]
33. QSOX2 ENSGALG00000001758 638 0.919 - - - - - - - 0.919 - - quiescin sulfhydryl oxidase 2 [Source:HGNC Symbol;Acc:HGNC:30249]
34. FRAS1 ENSGALG00000010316 5008 0.919 - - - - - - - 0.919 - - Fraser extracellular matrix complex subunit 1, transcript variant X2
35. AKAP2 ENSGALG00000015656 4310 0.919 - - - - - - - 0.919 - - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
36. AMACR ENSGALG00000003326 2657 0.919 - - - - - - - 0.919 - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
37. PTTG1IP ENSGALG00000005675, ENSGALG00000009044 10949 0.918 - - - - - - - 0.918 - - pituitary tumor-transforming 1 interacting protein, transcript variant X1
38. REPS2 ENSGALG00000016545 3347 0.918 - - - - - - - 0.918 - - RALBP1 associated Eps domain containing 2 [Source:NCBI gene;Acc:418617]
39. WDHD1 ENSGALG00000012199 3570 0.918 - - - - - - - 0.918 - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
40. TLCD2 ENSGALG00000021592 1166 0.918 - - - - - - - 0.918 - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
41. LIMCH1 ENSGALG00000014258 1987 0.917 - - - - - - - 0.917 - - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
42. STX8 ENSGALG00000001238 7403 0.917 - - - - - - - 0.917 - - syntaxin 8 [Source:NCBI gene;Acc:417321]
43. ERBB2IP ERBB2IP 5800 0.917 - - - - - - - 0.917 - -
44. EDNRA ENSGALG00000010013 2472 0.917 - - - - - - - 0.917 - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
45. GTF2H3 ENSGALG00000023682 9914 0.917 - - - - - - - 0.917 - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
46. TAPA1 TAPA1 8669 0.916 - - - - - - - 0.916 - -
47. GTF2A1 ENSGALG00000010576 4570 0.916 - - - - - - - 0.916 - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
48. SUPV3L1 ENSGALG00000004197 4141 0.916 - - - - - - - 0.916 - - Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
49. NQO2 ENSGALG00000025747 2287 0.916 - - - - - - - 0.916 - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
50. GPR27 ENSGALG00000027091 8111 0.916 - - - - - - - 0.916 - - G protein-coupled receptor 27
51. EVX1 ENSGALG00000037310 1974 0.915 - - - - - - - 0.915 - - even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]
52. NAP1L1 ENSGALG00000010238 14506 0.915 - - - - - - - 0.915 - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
53. BMS1 ENSGALG00000002624 8339 0.914 - - - - - - - 0.914 - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
54. MON2 ENSGALG00000009795 3868 0.914 - - - - - - - 0.914 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:NCBI gene;Acc:417818]
55. GNG2 ENSGALG00000027629 9404 0.909 - - - - - - - 0.909 - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
56. MRPS35 ENSGALG00000036730 6327 0.907 - - - - - - - 0.907 - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
57. MRPS11 ENSGALG00000006777 16009 0.906 - - - - - - - 0.906 - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
58. ACSF2 ENSGALG00000019768 2727 0.903 - - - - - - - 0.903 - - acyl-CoA synthetase family member 2 [Source:HGNC Symbol;Acc:HGNC:26101]
59. SERPINE2 ENSGALG00000005135 16108 0.902 - - - - - - - 0.902 - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
60. SOS1 ENSGALG00000039450 3941 0.901 - - - - - - - 0.901 - - SOS Ras/Rac guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:11187]
61. ACE ENSGALG00000000498 1398 0.895 - - - - - - - 0.895 - - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
62. IST1 ENSGALG00000000811 10527 0.893 - - - - - - - 0.893 - - IST1, ESCRT-III associated factor [Source:HGNC Symbol;Acc:HGNC:28977]
63. CTNNA1 ENSGALG00000002447 22379 0.892 - - - - - - - 0.892 - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
64. ENSGALG00000014852 ENSGALG00000014852 15288 0.881 - - - - - - - 0.881 - -
65. C9orf78 ENSGALG00000004152 7140 0.864 - - - - - - - 0.864 - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
66. MND1 ENSGALG00000009212 11765 0.863 - - - - - - - 0.863 - - meiotic nuclear divisions 1 [Source:NCBI gene;Acc:422399]
67. MPHOSPH8 ENSGALG00000017145 6280 0.863 - - - - - - - 0.863 - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
68. PSPC1 ENSGALG00000017142 13036 0.856 - - - - - - - 0.856 - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
69. ACTR2 ENSGALG00000008779 17812 0.855 - - - - - - - 0.855 - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
70. SRSF6 ENSGALG00000000990 12424 0.849 - - - - - - 0.849 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
71. MAB21L1 ENSGALG00000045052 1677 0.849 - - - - - - - 0.849 - - mab-21 like 1 [Source:NCBI gene;Acc:395208]
72. HNRNPH1 HNRNPH1 8819 0.847 - - - - - - - 0.847 - -
73. SEC22B ENSGALG00000039704 16080 0.845 - - - - - - 0.845 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
74. MOXD1 ENSGALG00000002911 8523 0.842 - - - - - - - 0.842 - - monooxygenase DBH like 1 [Source:NCBI gene;Acc:395333]
75. GTF3C4 ENSGALG00000031016 1221 0.826 - - - - - - - - 0.826 - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
76. EXOSC3 ENSGALG00000002426 7255 0.821 - - - - - - - 0.821 - - exosome component 3 [Source:NCBI gene;Acc:423626]
77. Sep-05 Sep-05 5887 0.82 - - - - - - - 0.820 - -
78. TRIP12 ENSGALG00000002929 11713 0.819 - - - - - - 0.819 - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
79. LONP1 ENSGALG00000040492 7133 0.819 - - - - - - 0.819 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
80. TLK1 ENSGALG00000009569 5446 0.815 - - - - - - 0.815 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
81. CDC73 ENSGALG00000002469 4586 0.814 - - - - - - 0.814 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
82. TIMM10 ENSGALG00000004845 31395 0.81 - - - - - - 0.810 - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
83. USP20 ENSGALG00000041104 3186 0.805 - - - - - - 0.805 - - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
84. TSPAN3 ENSGALG00000002774 28811 0.804 - - - - - - - 0.804 - - tetraspanin 3 [Source:NCBI gene;Acc:415348]
85. DTYMK ENSGALG00000006305 11736 0.802 - - - - - - 0.802 - - - deoxythymidylate kinase [Source:NCBI gene;Acc:770258]
86. GPI ENSGALG00000004956 40030 0.8 - - - - - - - 0.800 - - glucose-6-phosphate isomerase [Source:NCBI gene;Acc:415783]
87. MTG1 ENSGALG00000003549 5032 0.799 - - - 0.799 - - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
88. TSNAX ENSGALG00000037177 3246 0.797 - - - - - - - 0.797 - - translin associated factor X [Source:NCBI gene;Acc:421526]
89. RIT1 ENSGALG00000014647 7174 0.795 - - - - - - 0.795 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
90. CPSF6 ENSGALG00000019355 7634 0.794 - - - - - - 0.794 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
91. URM1 ENSGALG00000004971 17880 0.794 - - - - - - 0.794 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
92. DGCR6 ENSGALG00000027369 7882 0.791 - - - - - - - 0.791 - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
93. NDUFB4 ENSGALG00000027688 8951 0.79 - - - - - - 0.790 - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
94. HAUS1 ENSGALG00000040397 6195 0.789 - - - - - - 0.789 - - - HAUS augmin like complex subunit 1 [Source:NCBI gene;Acc:416380]
95. ARL5B ENSGALG00000008557 12887 0.788 - - - - - - - - 0.788 - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
96. SBNO1 ENSGALG00000003392 6731 0.788 - - - - - - 0.788 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
97. MPRIP ENSGALG00000004798 6700 0.785 - - - - - - 0.785 - - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
98. ZCCHC2 ENSGALG00000012889 3163 0.785 - - - - - - 0.785 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
99. SUV39H2 ENSGALG00000013920 4360 0.784 - - - - - - 0.784 - - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
100. GALT ENSGALG00000026195 2002 0.784 - - - - - - - - 0.784 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]

There are 255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA