Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX5

Gene Name Gene ID Reads Annotation
SNX5 ENSGALG00000008691 2108 sorting nexin 5 [Source:NCBI gene;Acc:416718]











Genes with expression patterns similar to SNX5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX5 ENSGALG00000008691 2108 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 5 [Source:NCBI gene;Acc:416718]
2. GPR20 ENSGALG00000041730 1926 1.557 - - - - - - - 0.759 0.798 - G protein-coupled receptor 20 [Source:HGNC Symbol;Acc:HGNC:4475]
3. XPC ENSGALG00000006357 2484 1.492 - - - - - 0.744 - - 0.748 - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
4. MPP7 ENSGALG00000007408 2485 1.484 - - - - - - 0.754 - 0.730 - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
5. ECI2 ENSGALG00000012809 3692 1.468 - - - - - - 0.729 - 0.739 - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
6. RLF ENSGALG00000000862 586 0.89 - - - - - - - - 0.890 - rearranged L-myc fusion [Source:HGNC Symbol;Acc:HGNC:10025]
7. UGGT2 ENSGALG00000016893 206 0.867 - - - - - - - - 0.867 - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
8. ANXA1 ENSGALG00000015148 13804 0.847 - - - - - - - 0.847 - - annexin A1 [Source:NCBI gene;Acc:404271]
9. PCCA ENSGALG00000016872 103 0.84 - - - - - - - - 0.840 - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
10. RAMP2 ENSGALG00000024449 5860 0.826 - - - - - - - 0.826 - - receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
11. TRDN ENSGALG00000014848 130 0.824 - - - - - - - - 0.824 - triadin
12. PCDHGC3 ENSGALG00000028565 18583 0.822 - - - - - - - 0.822 - - Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
13. LYVE1 ENSGALG00000005643 1230 0.819 - - - - - - - 0.819 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
14. EPC1 ENSGALG00000007169 101 0.817 - - - - - - - - 0.817 - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
15. HEXDC ENSGALG00000039839 936 0.815 - - - - - - - - 0.815 - hexosaminidase D [Source:HGNC Symbol;Acc:HGNC:26307]
16. ISG12(2) ISG12(2) 146 0.805 - - - - - - - - 0.805 -
17. DAP3 ENSGALG00000019796 13278 0.803 - - - - - - 0.803 - - - death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
18. SLX4 ENSGALG00000031841 1208 0.802 - - - - - - - - 0.802 - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
19. FUCA1 ENSGALG00000004112 2154 0.798 - - - - - - - - 0.798 - alpha-L-fucosidase 1 [Source:HGNC Symbol;Acc:HGNC:4006]
20. UBTD2 ENSGALG00000037395 539 0.797 - - - - - 0.797 - - - - ubiquitin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24463]
21. DIS3 ENSGALG00000016930 3696 0.797 - - - - - - - - 0.797 - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
22. NCAPH ENSGALG00000032270 2103 0.796 - - - - - - - - 0.796 - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
23. CLNS1A ENSGALG00000008574 25675 0.795 - - - - - - 0.795 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
24. NUF2 ENSGALG00000003438 779 0.794 - - - - - 0.794 - - - - NUF2, NDC80 kinetochore complex component [Source:NCBI gene;Acc:395135]
25. GGA.31975 GGA.31975 8825 0.793 - - - - - - 0.793 - - -
26. TUBGCP2 ENSGALG00000003526 1005 0.792 - - - - - 0.792 - - - - tubulin gamma complex associated protein 2 [Source:NCBI gene;Acc:423673]
27. CMTM8 ENSGALG00000011484 2826 0.792 - - - - - - - 0.792 - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
28. ARHGAP18 ENSGALG00000031843 2117 0.792 - - - - - - - - 0.792 - Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]
29. TICRR ENSGALG00000006631 495 0.791 - - - - - - - - 0.791 - TOPBP1 interacting checkpoint and replication regulator [Source:NCBI gene;Acc:415489]
30. C1QL1 ENSGALG00000028031 788 0.791 - - - - - - - - 0.791 - complement C1q like 1 [Source:HGNC Symbol;Acc:HGNC:24182]
31. IFITM3 ENSGALG00000026970 4738 0.79 - - - - - - - 0.790 - - Gallus gallus interferon-induced transmembrane protein 3 (IFITM3), mRNA. [Source:RefSeq mRNA;Acc:NM_001350061]
32. FGF12 ENSGALG00000036971 2631 0.79 - - - - - - - 0.790 - - fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
33. ENSGALG00000008755 ENSGALG00000008755 3523 0.789 - - - - - - - 0.789 - -
34. ACTN2 ENSGALG00000014463 1724 0.789 - - - - - 0.789 - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
35. MCCC1 ENSGALG00000008785 1376 0.789 - - - - - - - - 0.789 - methylcrotonoyl-CoA carboxylase 1 [Source:NCBI gene;Acc:424962]
36. FASTKD5 ENSGALG00000045410 386 0.787 - - - - - - - - 0.787 - FAST kinase domains 5 [Source:HGNC Symbol;Acc:HGNC:25790]
37. GPATCH8 ENSGALG00000041556 484 0.787 - - - - - - - - 0.787 - G-patch domain containing 8 [Source:HGNC Symbol;Acc:HGNC:29066]
38. FAM20A ENSGALG00000040655 934 0.786 - - - - - 0.786 - - - - FAM20A, golgi associated secretory pathway pseudokinase [Source:HGNC Symbol;Acc:HGNC:23015]
39. TBC1D4 ENSGALG00000016925 2961 0.785 - - - - - - - - 0.785 - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
40. ARHGAP40 ENSGALG00000003550 484 0.784 - - - - - - - 0.784 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
41. PRCP ENSGALG00000037521 4012 0.784 - - - - - - - 0.784 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
42. PARN ENSGALG00000003091 6363 0.783 - - - - - - - - 0.783 - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
43. ENSGALG00000004127 ENSGALG00000004127 566 0.783 - - - - - 0.783 - - - -
44. CNKSR2 ENSGALG00000016391 131 0.778 - - - - - - - - 0.778 - connector enhancer of kinase suppressor of Ras 2, transcript variant X1
45. AMMECR1L ENSGALG00000026728 2134 0.776 - - - - - - - - 0.776 - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
46. EVC2 ENSGALG00000015029 51 0.775 - - - - - 0.775 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
47. ENSGALG00000027849 ENSGALG00000027849 320 0.775 - - - - - - - - 0.775 -
48. TSEN54 3192 0.774 - - - - - - 0.774 - - - tRNA splicing endonuclease subunit 54, transcript variant X2
49. MCM3AP ENSGALG00000004363 3247 0.774 - - - - - - 0.774 - - - minichromosome maintenance complex component 3 associated protein [Source:HGNC Symbol;Acc:HGNC:6946]
50. SPDL1 ENSGALG00000001942 4403 0.773 - - - - - - 0.773 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
51. HOXB6 ENSGALG00000037619 435 0.773 - - - - - - - - 0.773 - homeobox B6 [Source:HGNC Symbol;Acc:HGNC:5117]
52. KIAA1609 KIAA1609 1749 0.772 - - - - - - - - 0.772 -
53. ANKRD49 ENSGALG00000017210 3247 0.769 - - - - - - 0.769 - - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
54. SEL1L3 ENSGALG00000039549 1400 0.769 - - - - - - - - 0.769 - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
55. SSFA2 2288 0.769 - - - - - - - 0.769 - - sperm specific antigen 2, transcript variant X2
56. CAPN15 ENSGALG00000002018 3353 0.769 - - - - - - - 0.769 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
57. PTTG1 17936 0.769 - - - - - - 0.769 - - - pituitary tumor-transforming 1, transcript variant X1
58. PAK2 ENSGALG00000006426 283 0.766 - - - - - - - - 0.766 - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
59. MYH9 ENSGALG00000043092 3026 0.763 - - - - - - - 0.763 - - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
60. BAG2 ENSGALG00000026605 3898 0.762 - - - - - - - - 0.762 - BCL2 associated athanogene 2
61. PAN3 ENSGALG00000017092 5387 0.761 - - - - - - 0.761 - - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
62. DRD4 ENSGALG00000040761 79 0.76 - - - - - 0.760 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
63. PTGFRN ENSGALG00000015464 14584 0.76 - - - - - - - 0.760 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
64. PDZK1IP1 ENSGALG00000010473 551 0.76 - - - - - - - 0.760 - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
65. MMRN2 770 0.757 - - - - - - - - 0.757 - multimerin 2, transcript variant X1
66. NMI ENSGALG00000012480 2172 0.757 - - - - - - - 0.757 - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
67. TPCN3 ENSGALG00000008198 124 0.757 - - - - - 0.757 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
68. MAP3K2 42 0.757 - - - - - - - - 0.757 - mitogen-activated protein kinase kinase kinase 2, transcript variant X3
69. EDN3 ENSGALG00000040880 1061 0.755 - - - - - - - - 0.755 - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]
70. TRAIP ENSGALG00000002908 6901 0.753 - - - - - - 0.753 - - - TRAF interacting protein [Source:NCBI gene;Acc:415927]
71. PXDNL ENSGALG00000036838 548 0.752 - - - - - 0.752 - - - - peroxidasin like, transcript variant X1
72. NIPAL4 ENSGALG00000039687 29 0.752 - - - - - 0.752 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
73. TGFBI ENSGALG00000029429 2306 0.752 - - - - - - - 0.752 - - transforming growth factor beta induced [Source:NCBI gene;Acc:395897]
74. SH3GLB1 ENSGALG00000006284 12764 0.751 - - - - - - 0.751 - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
75. TECPR2 ENSGALG00000011373 1063 0.75 - - - - - - - - 0.750 - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
76. ACN9 ACN9 269 0.75 - - - - - 0.750 - - - -
77. STMN3 ENSGALG00000006130 151 0.75 - - - - - 0.750 - - - - stathmin 3 [Source:NCBI gene;Acc:419263]
78. DCAF7 ENSGALG00000000510 8681 0.75 - - - - - - 0.750 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
79. TESC ENSGALG00000008206 2656 0.749 - - - - - - - 0.749 - - tescalcin [Source:NCBI gene;Acc:771113]
80. RBMS3 ENSGALG00000011439 25 0.749 - - - - - - - - 0.749 - RNA binding motif single stranded interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:13427]
81. RARRES2 ENSGALG00000042642 3043 0.749 - - - - - - - 0.749 - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
82. KLHL20 ENSGALG00000036931 1789 0.748 - - - - - - - 0.748 - - kelch like family member 20 [Source:NCBI gene;Acc:425091]
83. RHPN2 ENSGALG00000004814 1865 0.748 - - - - - 0.748 - - - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
84. BLVRA ENSGALG00000031786 23 0.748 - - - - - 0.748 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
85. GTF3C4 ENSGALG00000031016 1221 0.747 - - - - - 0.747 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
86. BLCAP ENSGALG00000027126 12200 0.747 - - - - - - 0.747 - - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
87. SALL4 ENSGALG00000041365 6760 0.747 - - - - - - 0.747 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
88. LY86 ENSGALG00000012801 865 0.747 - - - - - - - - 0.747 - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
89. ERCC4 ENSGALG00000002981 1178 0.746 - - - - - - - - 0.746 - Gallus gallus ERCC excision repair 4, endonuclease catalytic subunit (ERCC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318411]
90. IL4RA IL4RA 1237 0.746 - - - - - - - 0.746 - -
91. ODZ2 ODZ2 1380 0.745 - - - - - - - 0.745 - -
92. SETD3 ENSGALG00000034802 4125 0.745 - - - - - - 0.745 - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
93. ITCH ENSGALG00000040474 2646 0.743 - - - - - - 0.743 - - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
94. CUTC ENSGALG00000037283 2530 0.743 - - - - - - - - 0.743 - cutC copper transporter [Source:NCBI gene;Acc:423829]
95. SMPDL3A ENSGALG00000030275 246 0.743 - - - - - - - 0.743 - - sphingomyelin phosphodiesterase acid like 3A
96. TM9SF2L ENSGALG00000006487 5566 0.742 - - - - - - 0.742 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
97. CPEB1 ENSGALG00000002150 335 0.742 - - - - - - - - 0.742 - cytoplasmic polyadenylation element binding protein 1 [Source:NCBI gene;Acc:415326]
98. ANG-1 ANG-1 5239 0.742 - - - - - - - 0.742 - -
99. SECISBP2 ENSGALG00000010694 6990 0.741 - - - - - - 0.741 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
100. MGAT4B ENSGALG00000005924 2663 0.741 - - - - - 0.741 - - - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]

There are 154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA