Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX4

Gene Name Gene ID Reads Annotation
SNX4 ENSGALG00000012052 11634 sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]











Genes with expression patterns similar to SNX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX4 ENSGALG00000012052 11634 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
2. RCN1 RCN1 11758 1.699 - - - - - - 0.865 0.834 - -
3. QTRTD1 QTRTD1 10765 1.673 - - - - - - 0.777 0.896 - -
4. ZFR ENSGALG00000003235 8466 1.667 - - - - - - 0.823 0.844 - - zinc finger RNA binding protein, transcript variant X3
5. SLC25A17 ENSGALG00000012013 13948 1.63 - - - - - - 0.765 0.865 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
6. RRAS2 ENSGALG00000005998 6467 1.617 - - - - - - 0.787 0.830 - - RAS related 2 [Source:NCBI gene;Acc:423062]
7. AZIN1 ENSGALG00000029295 11085 1.609 - - - - - - 0.810 0.799 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
8. CHCHD1 ENSGALG00000028809 9955 1.605 - - - - - - 0.753 0.852 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
9. SNRPC ENSGALG00000002773 21965 1.596 - - - - - - 0.811 0.785 - - small nuclear ribonucleoprotein polypeptide C [Source:NCBI gene;Acc:419901]
10. SDF2L1 ENSGALG00000031982 6084 1.577 - - - - - - 0.851 0.726 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
11. ADI1 ENSGALG00000025796 8636 1.565 - - - - - - - 0.747 0.818 - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
12. NUP85 ENSGALG00000007974 21249 1.545 - - - - - - 0.783 0.762 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
13. NDUFA12 ENSGALG00000011325 19807 1.544 - - - - - - 0.731 0.813 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
14. TLK1 ENSGALG00000009569 5446 1.53 - - - - - - 0.772 0.758 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
15. PPP2R5A ENSGALG00000009828 10309 1.53 - - - - - - 0.724 0.806 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
16. MED17 ENSGALG00000017218 5821 1.523 - - - - - - 0.760 0.763 - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
17. CNI CNI 18453 1.515 - - - - - - 0.743 0.772 - -
18. MRPL53 ENSGALG00000037867 6100 1.511 - - - - - - 0.729 0.782 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
19. HIF1A ENSGALG00000011870 9768 1.506 - - - - - - 0.712 0.794 - - hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
20. C11H16ORF80 C11H16ORF80 18673 1.501 - - - - - - 0.771 0.730 - -
21. RCN2 ENSGALG00000039284 17848 1.499 - - - - - - 0.728 0.771 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
22. R3HDM1 ENSGALG00000012246 6580 1.49 - - - - - - 0.756 0.734 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
23. SLMO2 SLMO2 9207 1.487 - - - - - - 0.785 0.702 - -
24. ERLIN2 ENSGALG00000003092 18251 1.484 - - - - 0.703 - - 0.781 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
25. C4orf27 C4orf27 16724 1.482 - - - - - - 0.750 0.732 - -
26. RIT1 ENSGALG00000014647 7174 1.477 - - - - - - 0.719 0.758 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
27. FLCN ENSGALG00000004816 4101 1.46 - - - - - - 0.756 - 0.704 - folliculin, transcript variant X1
28. GABPB1 ENSGALG00000023440 5676 1.458 - - - - - - 0.734 0.724 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
29. CCNDBP1 ENSGALG00000004837 11520 1.453 - - - - - - 0.724 0.729 - - cyclin D1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1587]
30. ENSGALG00000020510 ENSGALG00000020510 4037 1.452 - - - - - - 0.724 0.728 - -
31. FAM207A ENSGALG00000007513 8748 1.45 - - - - - - 0.736 0.714 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
32. MSMO1 ENSGALG00000009560 6928 1.415 - - - - - - 0.712 0.703 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
33. TXNDC17 ENSGALG00000027950 45004 1.411 - - - - - - 0.708 0.703 - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
34. KCTD2 ENSGALG00000007934 15085 0.906 - - - - - - 0.906 - - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
35. TXN2 ENSGALG00000012532 12518 0.888 - - - - - - - 0.888 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
36. PSMD7 ENSGALG00000000707 26350 0.886 - - - - - - - 0.886 - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
37. GTPBP4 ENSGALG00000006703 16183 0.884 - - - - - - 0.884 - - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
38. NR2C1 ENSGALG00000011327 5109 0.882 - - - - - - - 0.882 - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
39. GAS41 GAS41 9941 0.877 - - - - - - - 0.877 - -
40. C19orf70 ENSGALG00000026847 19315 0.876 - - - - - - - 0.876 - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
41. TMLHE ENSGALG00000007443 3619 0.875 - - - - - - - 0.875 - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
42. PPP1R8 ENSGALG00000000729 11797 0.874 - - - - - - - 0.874 - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
43. NARS ENSGALG00000040506 9506 0.868 - - - - - - - 0.868 - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
44. CETN1 ENSGALG00000026741 7243 0.866 - - - - - - 0.866 - - - centrin 1 [Source:NCBI gene;Acc:422668]
45. NDUFAF1 ENSGALG00000008587 14779 0.861 - - - - - - 0.861 - - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
46. TXNL1 ENSGALG00000033862 13899 0.859 - - - - - - - 0.859 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
47. COX7C ENSGALG00000027963 84312 0.857 - - - - - - 0.857 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
48. CDC20 ENSGALG00000009971 11197 0.857 - - - - - - 0.857 - - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
49. ENSGALG00000007035 ENSGALG00000007035 8473 0.857 - - - - - - - 0.857 - -
50. SRP14 ENSGALG00000009592 17828 0.856 - - - - - - - 0.856 - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
51. LYAR ENSGALG00000015000 10756 0.855 - - - - - - - 0.855 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
52. MED4 ENSGALG00000016995 3309 0.855 - - - - - - - 0.855 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
53. MYST2 MYST2 8078 0.854 - - - - - - - 0.854 - -
54. SCAMP5 ENSGALG00000014116 8877 0.854 - - - - - - - 0.854 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
55. AGFG1 ENSGALG00000003052 4766 0.852 - - - - - - - 0.852 - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
56. MRPL54 ENSGALG00000027611 39450 0.852 - - - - - - 0.852 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
57. RPL35 ENSGALG00000035677 252113 0.85 - - - - - - 0.850 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
58. CHMP4B ENSGALG00000002095 17422 0.85 - - - - - - - 0.850 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
59. RNF114 ENSGALG00000008021 6078 0.85 - - - - - - - 0.850 - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
60. MAEA ENSGALG00000013310 13230 0.85 - - - - - - - 0.850 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
61. PSMD12 ENSGALG00000026225 17473 0.85 - - - - - - 0.850 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
62. NUP37 ENSGALG00000012759 9985 0.849 - - - - - - - 0.849 - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
63. GLRX5 ENSGALG00000011079 28943 0.849 - - - - - - 0.849 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
64. MEMO1 ENSGALG00000010624 6722 0.847 - - - - - - 0.847 - - - mediator of cell motility 1 [Source:NCBI gene;Acc:421483]
65. BZW2 ENSGALG00000010809 29213 0.847 - - - - - - - 0.847 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
66. HSDL2 ENSGALG00000015663 8966 0.846 - - - - - - 0.846 - - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
67. gga-mir-7476 gga-mir-7476 20209 0.844 - - - - - - - 0.844 - -
68. RAD21 ENSGALG00000029523 25658 0.844 - - - - - - 0.844 - - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
69. SRGAP1 ENSGALG00000009825 6753 0.843 - - - - - - 0.843 - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
70. DYNC1H1 ENSGALG00000011330 16400 0.842 - - - - - - 0.842 - - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
71. EIF2B EIF2B 28702 0.84 - - - - - - 0.840 - - -
72. PTP4A2 ENSGALG00000003265 24826 0.839 - - - - - - 0.839 - - - protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
73. TRAF7 ENSGALG00000005767 4615 0.838 - - - - - - - 0.838 - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
74. RANBP3 ENSGALG00000000577 8856 0.838 - - - - - - - 0.838 - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
75. COMMD3 ENSGALG00000007900 8629 0.836 - - - - - - - 0.836 - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
76. FBXO3 ENSGALG00000034029 15089 0.834 - - - - - - - 0.834 - - F-box protein 3 [Source:HGNC Symbol;Acc:HGNC:13582]
77. SRRM1 ENSGALG00000001283 23820 0.831 - - - - - - 0.831 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
78. SLC35B1 ENSGALG00000035057 10683 0.828 - - - - - - - 0.828 - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
79. ARF6 ENSGALG00000026944 22014 0.827 - - - - - - 0.827 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
80. TMPO ENSGALG00000011504 14454 0.826 - - - - - - 0.826 - - - thymopoietin [Source:NCBI gene;Acc:417923]
81. RPL7L1 ENSGALG00000011974 20292 0.825 - - - - - - 0.825 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
82. BUB1 ENSGALG00000008233 11536 0.825 - - - - - - 0.825 - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:NCBI gene;Acc:421226]
83. CIAPIN1 ENSGALG00000029268 23036 0.825 - - - - - - 0.825 - - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
84. CBLL1 ENSGALG00000038981 6725 0.824 - - - - - - - 0.824 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
85. GCSH ENSGALG00000032679 29231 0.824 - - - - - - - 0.824 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
86. MRPL14 ENSGALG00000010285 11820 0.822 - - - - - - 0.822 - - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
87. RPL36AL ENSGALG00000004952 205590 0.822 - - - - - - 0.822 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
88. ARPC1A ENSGALG00000004693 11583 0.821 - - - - - - 0.821 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
89. TPD52L2 ENSGALG00000004683 13624 0.821 - - - - - - 0.821 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
90. SF3A2 ENSGALG00000021679 12580 0.82 - - - - - - - 0.820 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
91. SRP9 ENSGALG00000026009 12418 0.82 - - - - - - 0.820 - - - signal recognition particle 9 [Source:NCBI gene;Acc:770243]
92. UQCRH ENSGALG00000017380 55734 0.82 - - - - - - 0.820 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
93. ENSGALG00000009044 ENSGALG00000009044 14492 0.818 - - - - - - 0.818 - - -
94. C7orf50 ENSGALG00000004055 5786 0.818 - - - - - - - 0.818 - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
95. FUBP3 ENSGALG00000003941 12667 0.817 - - - - - - - 0.817 - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
96. PSMD3 ENSGALG00000033162 25615 0.814 - - - - - - 0.814 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
97. RNF10 ENSGALG00000036417 8027 0.812 - - - - - - 0.812 - - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
98. PSMB3 ENSGALG00000001597 22588 0.812 - - - - - - - 0.812 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
99. RFC3 ENSGALG00000017064 7011 0.812 - - - - - - 0.812 - - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
100. CASP3 ENSGALG00000010638 11572 0.812 - - - - - - 0.812 - - - caspase 3 [Source:NCBI gene;Acc:395476]

There are 505 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA