Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX3

Gene Name Gene ID Reads Annotation
SNX3 ENSGALG00000015304 1631 sorting nexin 3 [Source:NCBI gene;Acc:421772]











Genes with expression patterns similar to SNX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX3 ENSGALG00000015304 1631 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 3 [Source:NCBI gene;Acc:421772]
2. THUMPD3 ENSGALG00000008394 17711 1.606 - - - - - - 0.712 0.894 - - THUMP domain containing 3, transcript variant X2
3. BIRC6 ENSGALG00000010541 7999 1.475 - - - - - - 0.707 0.768 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
4. SPRYD7 ENSGALG00000017010 1910 0.987 - - - - - - - 0.987 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
5. RIPK1 ENSGALG00000012827 3405 0.984 - - - - - - - 0.984 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
6. SMPD4 ENSGALG00000006455 2270 0.983 - - - - - - - 0.983 - - sphingomyelin phosphodiesterase 4, transcript variant X1
7. SRFBP1 ENSGALG00000005316 6826 0.982 - - - - - - - 0.982 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
8. ARHGAP32 ENSGALG00000043511 7916 0.982 - - - - - - - 0.982 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
9. SKIV2L2 ENSGALG00000014709 2926 0.982 - - - - - - - 0.982 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
10. ARL1 ENSGALG00000011651 3230 0.982 - - - - - - - 0.982 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
11. B4GALT3 ENSGALG00000022891 2825 0.982 - - - - - - - 0.982 - - beta-1,4-galactosyltransferase 3
12. YOD1 ENSGALG00000037597 2989 0.981 - - - - - - - 0.981 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
13. C6ORF162 C6ORF162 4217 0.981 - - - - - - - 0.981 - -
14. C2CD5 ENSGALG00000013210 3060 0.981 - - - - - - - 0.981 - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
15. GATAD2A ENSGALG00000042900 6337 0.98 - - - - - - - 0.980 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
16. LDLRAP1 ENSGALG00000001051 1657 0.98 - - - - - - - 0.980 - - low density lipoprotein receptor adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:18640]
17. SMAD1 ENSGALG00000009977 3540 0.979 - - - - - - - 0.979 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
18. UBXN2B ENSGALG00000030585 2177 0.977 - - - - - - - 0.977 - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
19. ARNT ENSGALG00000000751 3495 0.977 - - - - - - - 0.977 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
20. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.977 - - - - - - - 0.977 - -
21. PSD2 ENSGALG00000030836 236 0.976 - - - - - - - 0.976 - - pleckstrin and Sec7 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19092]
22. PLPPR1 ENSGALG00000015542 3179 0.976 - - - - - - - 0.976 - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
23. TMEM237 ENSGALG00000008381 1317 0.976 - - - - - - - 0.976 - - transmembrane protein 237 [Source:NCBI gene;Acc:424084]
24. NPB NPB 8056 0.976 - - - - - - - 0.976 - -
25. TDRD3 ENSGALG00000016936 3412 0.976 - - - - - - - 0.976 - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
26. CACTIN ENSGALG00000024391 1408 0.975 - - - - - - - 0.975 - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
27. KLHL13 KLHL13 2712 0.975 - - - - - - - 0.975 - -
28. THBS4 ENSGALG00000014804 4228 0.975 - - - - - - - 0.975 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
29. LTN1 ENSGALG00000015804 3784 0.975 - - - - - - - 0.975 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
30. gga-mir-1723 ENSGALG00000025386 6662 0.975 - - - - - - - 0.975 - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
31. ILKAP ENSGALG00000006253 7388 0.974 - - - - - - - 0.974 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
32. ARRDC2 ENSGALG00000003527 1797 0.974 - - - - - - - 0.974 - - arrestin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25225]
33. MEIS1 ENSGALG00000041626 3865 0.974 - - - - - - - 0.974 - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
34. PALD1 ENSGALG00000004465 3553 0.974 - - - - - - - 0.974 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
35. LAMA4 ENSGALG00000015001 993 0.974 - - - - - - - 0.974 - - laminin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6484]
36. LIN28A ENSGALG00000036022 542 0.973 - - - - - - - 0.973 - - lin-28 homolog A [Source:NCBI gene;Acc:428206]
37. C4H4ORF41 C4H4ORF41 1520 0.973 - - - - - - - 0.973 - -
38. CDK14 ENSGALG00000009062 995 0.973 - - - - - - - 0.973 - - cyclin dependent kinase 14 [Source:HGNC Symbol;Acc:HGNC:8883]
39. AEN ENSGALG00000044204 2633 0.973 - - - - - - - 0.973 - - apoptosis enhancing nuclease, transcript variant X1
40. AK1 ENSGALG00000029150 5935 0.973 - - - - - - - 0.973 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
41. MYO3A ENSGALG00000007647 643 0.973 - - - - - - - 0.973 - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
42. TMEM245 ENSGALG00000013138 501 0.973 - - - - - - - 0.973 - - transmembrane protein 245 [Source:HGNC Symbol;Acc:HGNC:1363]
43. C1orf123 ENSGALG00000026516 3227 0.973 - - - - - - - 0.973 - - chromosome 1 open reading frame 123 [Source:HGNC Symbol;Acc:HGNC:26059]
44. HIBADH ENSGALG00000033207 3540 0.972 - - - - - - - 0.972 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
45. GID8 ENSGALG00000005700 3992 0.972 - - - - - - - 0.972 - - GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
46. ZUFSP 549 0.972 - - - - - - - 0.972 - - zinc finger with UFM1 specific peptidase domain
47. BLZF1 ENSGALG00000015225 3594 0.971 - - - - - - - 0.971 - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
48. FAAH ENSGALG00000010433 3309 0.971 - - - - - - - 0.971 - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
49. SGPL1 ENSGALG00000004553 4520 0.971 - - - - - - - 0.971 - - sphingosine-1-phosphate lyase 1 [Source:NCBI gene;Acc:423714]
50. DENND1A ENSGALG00000001157 503 0.971 - - - - - - - 0.971 - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
51. NOL6 ENSGALG00000030730 7191 0.971 - - - - - - - 0.971 - - nucleolar protein 6
52. PIK3R3 ENSGALG00000010335 374 0.971 - - - - - - - 0.971 - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
53. PTN ENSGALG00000040493 864 0.97 - - - - - - - 0.970 - - pleiotrophin [Source:NCBI gene;Acc:418125]
54. PLEKHA3 ENSGALG00000009135 1700 0.97 - - - - - - - 0.970 - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
55. PCP4 ENSGALG00000022819 880 0.97 - - - - - - - 0.970 - - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
56. H2AFY2 ENSGALG00000004794 576 0.97 - - - - - - - 0.970 - - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
57. LRRFIP2 ENSGALG00000033102 8250 0.97 - - - - - - - 0.970 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
58. SMAD2W ENSGALG00000014184 1773 0.97 - - - - - - - 0.970 - - SMAD family member 2-W, transcript variant X3
59. ARHGEF12 ENSGALG00000006663 1369 0.97 - - - - - - - 0.970 - - Rho guanine nucleotide exchange factor 12 [Source:HGNC Symbol;Acc:HGNC:14193]
60. ATRIP ENSGALG00000004670 3647 0.97 - - - - - - - 0.970 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
61. ENSGALG00000029113 ENSGALG00000029113 737 0.969 - - - - - - - 0.969 - -
62. RFLB RFLB 140 0.969 - - - - - - - 0.969 - -
63. RERG ENSGALG00000028186 1124 0.969 - - - - - - - 0.969 - - RAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]
64. PTER ENSGALG00000008728 162 0.969 - - - - - - - 0.969 - - phosphotriesterase related [Source:HGNC Symbol;Acc:HGNC:9590]
65. GALNT2 ENSGALG00000011106 167 0.969 - - - - - - - 0.969 - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:4124]
66. ETAA1 ENSGALG00000027922 1684 0.969 - - - - - - - 0.969 - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
67. LEMD2 ENSGALG00000002870 2803 0.969 - - - - - - - 0.969 - - LEM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21244]
68. ARID1B ENSGALG00000013683 3397 0.968 - - - - - - - 0.968 - - AT-rich interaction domain 1B [Source:HGNC Symbol;Acc:HGNC:18040]
69. C14orf105 C14orf105 135 0.968 - - - - - - - 0.968 - -
70. GAS6 ENSGALG00000016820 481 0.967 - - - - - - - 0.967 - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
71. SYAP1 ENSGALG00000016548 3347 0.967 - - - - - - - 0.967 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
72. SEMA7A ENSGALG00000001412 1505 0.967 - - - - - - - 0.967 - - semaphorin 7A (John Milton Hagen blood group) [Source:NCBI gene;Acc:415298]
73. TMEM144 ENSGALG00000026253 1744 0.967 - - - - - - - 0.967 - - transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633]
74. HTRA1 ENSGALG00000041140 1750 0.966 - - - - - - - 0.966 - - HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]
75. MMP16 ENSGALG00000032031 827 0.966 - - - - - - - 0.966 - - matrix metallopeptidase 16 [Source:NCBI gene;Acc:396116]
76. PRPSAP2 ENSGALG00000005064 5549 0.965 - - - - - - - 0.965 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
77. C11H19ORF12 C11H19ORF12 5149 0.965 - - - - - - - 0.965 - -
78. SEC24B ENSGALG00000035482 3430 0.965 - - - - - - - 0.965 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
79. HNRNPK ENSGALG00000012591 1109 0.965 - - - - - - - 0.965 - - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
80. PAXIP1 ENSGALG00000036064 3120 0.965 - - - - - - - 0.965 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
81. FNDC5 ENSGALG00000003567 3328 0.965 - - - - - - - 0.965 - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
82. THAP5 ENSGALG00000009494 6540 0.964 - - - - - - - 0.964 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
83. HEATR6 ENSGALG00000005516 3347 0.964 - - - - - - - 0.964 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
84. ENSGALG00000007355 ENSGALG00000007355 2149 0.964 - - - - - - - 0.964 - -
85. SEMA5B ENSGALG00000011686 4184 0.963 - - - - - - - 0.963 - - semaphorin 5B [Source:HGNC Symbol;Acc:HGNC:10737]
86. TMEM47 ENSGALG00000027198 3619 0.963 - - - - - - - 0.963 - - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
87. SPATS2L ENSGALG00000008152 3037 0.962 - - - - - - - 0.962 - - spermatogenesis associated serine rich 2 like [Source:NCBI gene;Acc:424067]
88. CTNNBIP1 ENSGALG00000026306 8049 0.959 - - - - - - - 0.959 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
89. CDXB CDXB 143 0.959 - - - - - - - 0.959 - -
90. TAF7 4725 0.959 - - - - - - - 0.959 - - TATA-box binding protein associated factor 7, transcript variant X1
91. HSDL2 ENSGALG00000015663 8966 0.958 - - - - - - - 0.958 - - hydroxysteroid dehydrogenase like 2 [Source:HGNC Symbol;Acc:HGNC:18572]
92. MLX ENSGALG00000003199 5286 0.958 - - - - - - - 0.958 - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
93. CUL4B ENSGALG00000008559 16864 0.956 - - - - - - - 0.956 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
94. SMU1 ENSGALG00000002014 8136 0.955 - - - - - - - 0.955 - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
95. DNTTIP1 ENSGALG00000003575 4687 0.954 - - - - - - - 0.954 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
96. RAD50 ENSGALG00000006794 4308 0.949 - - - - - - - 0.949 - - RAD50 double strand break repair protein, transcript variant X4
97. AHR ENSGALG00000010836 2276 0.942 - - - - - - - 0.942 - - aryl hydrocarbon receptor [Source:NCBI gene;Acc:373907]
98. gga-mir-6683 ENSGALG00000026767 5682 0.941 - - - - - - - 0.941 - - gga-mir-6683 [Source:miRBase;Acc:MI0022504]
99. NAP1L4 ENSGALG00000006446 10868 0.939 - - - - - - - 0.939 - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
100. PDZRN3 ENSGALG00000007819 4139 0.938 - - - - - - - 0.938 - - PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]

There are 243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA