Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX29

Gene Name Gene ID Reads Annotation
SNX29 ENSGALG00000039855 676 sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]











Genes with expression patterns similar to SNX29

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX29 ENSGALG00000039855 676 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 29 [Source:HGNC Symbol;Acc:HGNC:30542]
2. RPS6KA6 ENSGALG00000007097 94 0.827 - - 0.827 - - - - - - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
3. IQGAP1 ENSGALG00000030162 1047 0.816 - - 0.816 - - - - - - - IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
4. DNAAF1 ENSGALG00000003258 115 0.808 - - 0.808 - - - - - - - dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
5. FAT3 ENSGALG00000017229 141 0.806 - - 0.806 - - - - - - - FAT atypical cadherin 3 [Source:NCBI gene;Acc:395167]
6. SAR1B ENSGALG00000038753 6493 0.805 - - 0.805 - - - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
7. IGF2R ENSGALG00000011621 81 0.801 - - - - - - - 0.801 - - insulin like growth factor 2 receptor [Source:NCBI gene;Acc:395817]
8. XYLT1 ENSGALG00000006757 169 0.794 - - 0.794 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
9. PRKCZ ENSGALG00000001270 12 0.791 - - 0.791 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
10. C1orf131 C1orf131 141 0.79 - - 0.790 - - - - - - -
11. WDR48 ENSGALG00000006052 3575 0.786 - - 0.786 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
12. GAD2 ENSGALG00000040436 124 0.78 - - 0.780 - - - - - - - glutamate decarboxylase 2 [Source:HGNC Symbol;Acc:HGNC:4093]
13. UCK1 ENSGALG00000003732 2325 0.776 - - - - - - - 0.776 - - uridine-cytidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:14859]
14. ENSGALG00000002749 ENSGALG00000002749 1033 0.773 - - - - - - - 0.773 - -
15. LEMD3 ENSGALG00000009873 347 0.77 - - 0.770 - - - - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
16. PLEKHJ1 ENSGALG00000000835 55 0.769 - - 0.769 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
17. C1S ENSGALG00000014603 80 0.767 - - 0.767 - - - - - - - complement C1s [Source:NCBI gene;Acc:418294]
18. ADAM9 ENSGALG00000003398 1299 0.767 - - 0.767 - - - - - - - ADAM metallopeptidase domain 9 [Source:NCBI gene;Acc:426781]
19. NMRK1 ENSGALG00000015156 88 0.766 - - 0.766 - - - - - - - nicotinamide riboside kinase 1 [Source:HGNC Symbol;Acc:HGNC:26057]
20. TSPAN18 ENSGALG00000036901 14 0.765 - - 0.765 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
21. ENSGALG00000021882 ENSGALG00000021882 63 0.765 - - 0.765 - - - - - - -
22. CEP128 ENSGALG00000010562 133 0.763 - - 0.763 - - - - - - - centrosomal protein 128 [Source:HGNC Symbol;Acc:HGNC:20359]
23. ZBTB21 ENSGALG00000016147 13 0.762 - - 0.762 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
24. ACAP3 ENSGALG00000033293 605 0.762 - - - - - - - 0.762 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, transcript variant X6
25. LRRC56 ENSGALG00000041955 16 0.761 - - 0.761 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
26. DINB1 DINB1 113 0.761 - - 0.761 - - - - - - -
27. DNAH7 ENSGALG00000007841 32 0.76 - - 0.760 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
28. LHX6 ENSGALG00000001347 7 0.759 - - 0.759 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
29. AFTPH ENSGALG00000008828 21 0.759 - - 0.759 - - - - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
30. ANKRD42 8 0.759 - - 0.759 - - - - - - - ankyrin repeat domain 42
31. SPTSSBL ENSGALG00000026131 70 0.759 - - 0.759 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
32. PPIP5K2 ENSGALG00000015264 862 0.757 - - 0.757 - - - - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:29035]
33. HOXA9 ENSGALG00000028983 9298 0.757 - - 0.757 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
34. ENSGALG00000000407 ENSGALG00000000407 32 0.756 - - 0.756 - - - - - - -
35. IKBIP ENSGALG00000026284 31 0.756 - - 0.756 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
36. PLAG1 ENSGALG00000015407 17 0.755 - - 0.755 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
37. SPATA16 ENSGALG00000030383 7 0.754 - - - - - - - 0.754 - - spermatogenesis associated 16 [Source:HGNC Symbol;Acc:HGNC:29935]
38. TYSND1 ENSGALG00000033807 716 0.754 - - - - - - - 0.754 - - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
39. PSMD4 ENSGALG00000028505 16 0.752 - - 0.752 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
40. BTBD6 ENSGALG00000033813 163 0.752 - - 0.752 - - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
41. VANGL1 ENSGALG00000015025 67 0.751 - - 0.751 - - - - - - - VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]
42. FNDC7 ENSGALG00000001983 24 0.75 - - 0.750 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
43. ITGB2 ENSGALG00000007511 46 0.75 - - 0.750 - - - - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
44. CCDC86 ENSGALG00000036935 5280 0.75 - - - - - - - 0.750 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
45. YDJC ENSGALG00000029198 14 0.749 - - 0.749 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
46. ENSGALG00000006278 ENSGALG00000006278 202 0.749 - - 0.749 - - - - - - -
47. ENSGALG00000026975 ENSGALG00000026975 8 0.749 - - 0.749 - - - - - - -
48. SATB2 ENSGALG00000008135 347 0.747 - - 0.747 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
49. LEPREL2 LEPREL2 2046 0.747 - - - - - - - 0.747 - -
50. PER3 ENSGALG00000000573 590 0.746 - - - - - - - 0.746 - - period circadian clock 3 [Source:NCBI gene;Acc:419366]
51. CYP3A4 ENSGALG00000004436 75 0.744 - - 0.744 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
52. ZIC3 ENSGALG00000031144 863 0.744 - - - - - - - 0.744 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
53. TMEM230 ENSGALG00000036876 55 0.743 - - 0.743 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
54. MTMR10 85 0.74 - - 0.740 - - - - - - - myotubularin related protein 10
55. NRIP3 ENSGALG00000005903 58 0.738 - - - - - - - 0.738 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
56. SMO ENSGALG00000036114 6559 0.737 - - - - - - - 0.737 - - smoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
57. MAP9 ENSGALG00000020253 785 0.737 - - 0.737 - - - - - - - microtubule associated protein 9, transcript variant X7
58. NSDHL ENSGALG00000007493 3126 0.737 - - - - - - - 0.737 - - NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:HGNC:13398]
59. NSL1/DC31 NSL1/DC31 43 0.735 - - 0.735 - - - - - - -
60. RAB24 ENSGALG00000002984 6264 0.735 - - 0.735 - - - - - - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
61. MICU3 ENSGALG00000013661 1466 0.734 - - 0.734 - - - - - - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
62. DSG2 ENSGALG00000015142 67 0.734 - - 0.734 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
63. B3GNTL1 ENSGALG00000001433 22 0.734 - - 0.734 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
64. AQP12 AQP12 11 0.732 - - - - - - - 0.732 - -
65. RAD51D ENSGALG00000031918 1312 0.731 - - 0.731 - - - - - - - RAD51 paralog D [Source:NCBI gene;Acc:417528]
66. MRRF ENSGALG00000001333 2102 0.731 - - - - - - - 0.731 - - mitochondrial ribosome recycling factor [Source:NCBI gene;Acc:417110]
67. PDCD6IP ENSGALG00000033500 580 0.731 - - 0.731 - - - - - - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
68. CYP2H1 CYP2H1 363 0.73 - - - - - - - 0.730 - -
69. RAB21 ENSGALG00000010183 7718 0.729 - - - - - - - 0.729 - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
70. IMPG2 ENSGALG00000015322 74 0.729 - - - - - - - - 0.729 - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
71. C3ORF64 C3ORF64 49 0.729 - - 0.729 - - - - - - -
72. FBXL5 ENSGALG00000014510 245 0.728 - - - - - - - 0.728 - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
73. RALA ENSGALG00000031893 1241 0.728 - - 0.728 - - - - - - - RAS like proto-oncogene A [Source:HGNC Symbol;Acc:HGNC:9839]
74. ZFAND4 ENSGALG00000005893 1415 0.728 - - - - - - - 0.728 - - zinc finger AN1-type containing 4 [Source:HGNC Symbol;Acc:HGNC:23504]
75. INA ENSGALG00000028238 208 0.728 - - - - - - - 0.728 - - internexin neuronal intermediate filament protein alpha
76. ENSGALG00000029120 ENSGALG00000029120 73 0.727 - - 0.727 - - - - - - -
77. ERGIC1 ENSGALG00000002863 3296 0.727 - - 0.727 - - - - - - - endoplasmic reticulum-golgi intermediate compartment 1 [Source:HGNC Symbol;Acc:HGNC:29205]
78. CD4 ENSGALG00000014477 19 0.727 - - - - - - - 0.727 - - CD4 molecule [Source:NCBI gene;Acc:395362]
79. SPECC1 ENSGALG00000004400 611 0.726 - - - - - - - 0.726 - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:30615]
80. KIF9 ENSGALG00000005517 70 0.725 - - 0.725 - - - - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
81. CNTF ENSGALG00000026207 47 0.725 - - 0.725 - - - - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
82. GFAP ENSGALG00000000909 21 0.724 - - - - - - - 0.724 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
83. KIAA1549 ENSGALG00000012796 60 0.724 - - 0.724 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
84. SAMSN1 ENSGALG00000040926 88 0.724 - - 0.724 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
85. UBE3C ENSGALG00000006461 57 0.723 - - 0.723 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
86. SNAP23 ENSGALG00000009097 36 0.722 - - - - - - - 0.722 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
87. KRT20 ENSGALG00000019716 11 0.722 - - - - - - - 0.722 - - keratin 20 [Source:NCBI gene;Acc:420045]
88. SHPRH ENSGALG00000012289 992 0.722 - - - - - - - - 0.722 - SNF2 histone linker PHD RING helicase [Source:HGNC Symbol;Acc:HGNC:19336]
89. MMP9 ENSGALG00000006992 78 0.722 - - 0.722 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
90. RAB11FIP4 ENSGALG00000003227 62 0.721 - - - - - - - 0.721 - - RAB11 family interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30267]
91. USP53 ENSGALG00000011990 12 0.721 - - - - - - - 0.721 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
92. RTN4RL2 ENSGALG00000032903 809 0.721 - - - - - - - 0.721 - - reticulon 4 receptor like 2 [Source:HGNC Symbol;Acc:HGNC:23053]
93. SDR42E2 ENSGALG00000006964 57 0.721 - - - - - - - 0.721 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
94. SLC9A7 ENSGALG00000016734 146 0.72 - - 0.720 - - - - - - - solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]
95. ABCB7 ENSGALG00000007788 170 0.72 - - - - - - - 0.720 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
96. TMCO4 ENSGALG00000004081 31 0.72 - - - - - - - 0.720 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
97. STAB1 21 0.719 - - - - - - - 0.719 - - stabilin 1, transcript variant X2
98. ENSGALG00000019053 ENSGALG00000019053 8 0.719 - - - - - - - 0.719 - -
99. FOXP4 ENSGALG00000033497 13 0.719 - - - - - - - 0.719 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
100. PLB1 PLB1 101 0.719 - - - - - - - 0.719 - -

There are 43 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA