Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX27

Gene Name Gene ID Reads Annotation
SNX27 ENSGALG00000040687 3221 sorting nexin family member 27 [Source:NCBI gene;Acc:425666]











Genes with expression patterns similar to SNX27

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX27 ENSGALG00000040687 3221 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin family member 27 [Source:NCBI gene;Acc:425666]
2. ING4 ENSGALG00000014457 5561 1.749 - - - 0.751 - - 0.998 - - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
3. PCDH18 ENSGALG00000009732 6634 1.718 - - - - - - 0.993 0.725 - - protocadherin 18 [Source:HGNC Symbol;Acc:HGNC:14268]
4. ATP5A1 ATP5A1 32367 1.69 - - - - - - 0.955 0.735 - -
5. MINA 3053 1.561 - - - 0.821 - - - 0.740 - - MYC induced nuclear antigen
6. PFKL ENSGALG00000006543 4361 1.528 - - - 0.783 - - - 0.745 - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
7. KIAA1143 ENSGALG00000035952 6735 1.503 - - - 0.778 - - - 0.725 - - KIAA1143 [Source:NCBI gene;Acc:420709]
8. MSH6 ENSGALG00000008957 6396 1.493 - - - 0.758 - - - 0.735 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
9. ZCCHC6 ENSGALG00000012607 3655 1.48 - - - 0.729 - - - 0.751 - - zinc finger CCHC-type containing 6 [Source:NCBI gene;Acc:100857368]
10. EMC3 ENSGALG00000003738 10363 1.465 - - - 0.716 - - - 0.749 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
11. CDC42BPB ENSGALG00000011432 8220 1.46 - - - 0.751 - - - 0.709 - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
12. SSR2 ENSGALG00000000764 32190 1.452 - - - 0.750 - - - 0.702 - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
13. TASP1 ENSGALG00000009057 1295 1 - - - - - - 1.000 - - - taspase 1 [Source:NCBI gene;Acc:416741]
14. MAD2L1BP ENSGALG00000027871 7835 1 - - - - - - 1.000 - - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
15. FURIN ENSGALG00000008341 2609 1 - - - - - - 1.000 - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
16. TET3 ENSGALG00000037860 3129 1 - - - - - - 1.000 - - - tet methylcytosine dioxygenase 3 [Source:HGNC Symbol;Acc:HGNC:28313]
17. KBTBD4 ENSGALG00000008089 1799 1 - - - - - - 1.000 - - - kelch repeat and BTB domain containing 4 [Source:NCBI gene;Acc:423180]
18. ITPK1 ENSGALG00000034898 4212 1 - - - - - - 1.000 - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
19. PRDM15 ENSGALG00000019178 2729 1 - - - - - - 1.000 - - - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
20. NPEPL1 ENSGALG00000007533 5908 0.999 - - - - - - 0.999 - - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
21. ACAD11 ENSGALG00000035949 5483 0.999 - - - - - - 0.999 - - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
22. MED18 ENSGALG00000028149 2684 0.999 - - - - - - 0.999 - - - mediator complex subunit 18 [Source:HGNC Symbol;Acc:HGNC:25944]
23. E2F1 ENSGALG00000003045 5604 0.999 - - - - - - 0.999 - - - E2F transcription factor 1 [Source:NCBI gene;Acc:396142]
24. BLZF1 ENSGALG00000015225 3594 0.999 - - - - - - 0.999 - - - basic leucine zipper nuclear factor 1 [Source:HGNC Symbol;Acc:HGNC:1065]
25. C9orf78 ENSGALG00000004152 7140 0.999 - - - - - - 0.999 - - - chromosome 9 open reading frame 78 [Source:HGNC Symbol;Acc:HGNC:24932]
26. ENSGALG00000029084 ENSGALG00000029084 890 0.999 - - - - - - 0.999 - - -
27. IDH2 ENSGALG00000034434 18307 0.999 - - - - - - 0.999 - - - isocitrate dehydrogenase (NADP(+)) 2, mitochondrial [Source:NCBI gene;Acc:431056]
28. SAT1 ENSGALG00000016348 8469 0.998 - - - - - - 0.998 - - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
29. CMIP ENSGALG00000038494 5016 0.998 - - - - - - 0.998 - - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
30. EIF2AK1 ENSGALG00000003391 3381 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:NCBI gene;Acc:395360]
31. ZNF326 ENSGALG00000006113 15141 0.997 - - - - - - 0.997 - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
32. GNL2 ENSGALG00000001973 10148 0.997 - - - - - - 0.997 - - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
33. EIF6 ENSGALG00000033993 14647 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 6 [Source:NCBI gene;Acc:419140]
34. ENPP2 ENSGALG00000032746 6086 0.996 - - - - - - 0.996 - - - ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
35. NOLC1 ENSGALG00000041124 12765 0.996 - - - - - - 0.996 - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
36. NCBP1 ENSGALG00000002087 8907 0.995 - - - - - - 0.995 - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
37. DNAJC8 ENSGALG00000000790 19405 0.995 - - - - - - 0.995 - - - DnaJ heat shock protein family (Hsp40) member C8 [Source:HGNC Symbol;Acc:HGNC:15470]
38. MTFR1 ENSGALG00000038385 9419 0.995 - - - - - - 0.995 - - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
39. GATC ENSGALG00000007195 8610 0.994 - - - - - - 0.994 - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
40. SLC25A4 ENSGALG00000010614 9970 0.994 - - - - - - 0.994 - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
41. AP3D1 ENSGALG00000000996 16143 0.993 - - - - - - 0.993 - - - adaptor related protein complex 3 delta 1 subunit, transcript variant X2
42. PSMC1 ENSGALG00000010675 20633 0.992 - - - - - - 0.992 - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
43. MRPL35 ENSGALG00000022950 26070 0.991 - - - - - - 0.991 - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
44. RPN1 ENSGALG00000005907 25315 0.991 - - - - - - 0.991 - - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
45. CD2AP ENSGALG00000016720 8852 0.989 - - - - - - 0.989 - - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
46. OTUD6B ENSGALG00000041337 15657 0.987 - - - - - - 0.987 - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
47. C20H20ORF24 ENSGALG00000001054 22026 0.98 - - - - - - 0.980 - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
48. LRWD1 ENSGALG00000001852 13862 0.977 - - - - - - 0.977 - - - leucine rich repeats and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21769]
49. CSNK1D ENSGALG00000002719 19530 0.976 - - - - - - 0.976 - - - casein kinase 1 delta [Source:NCBI gene;Acc:417378]
50. XPO5 ENSGALG00000010341 24765 0.967 - - - - - - 0.967 - - - exportin 5 [Source:NCBI gene;Acc:421450]
51. PPA2 ENSGALG00000010582 22301 0.948 - - - - - - 0.948 - - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
52. C13H5ORF15 C13H5ORF15 11559 0.947 - - - - - - 0.947 - - -
53. EMC2 ENSGALG00000040325 16227 0.913 - - - - - - 0.913 - - - ER membrane protein complex subunit 2 [Source:NCBI gene;Acc:420273]
54. DYL1 ENSGALG00000007153 94287 0.905 - - - - - - 0.905 - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
55. RPL9 ENSGALG00000000150 81866 0.887 - - - - - - 0.887 - - - ribosomal protein L9 [Source:NCBI gene;Acc:425468]
56. PRKD1 ENSGALG00000009900 2094 0.87 - - - 0.870 - - - - - - protein kinase D1 [Source:NCBI gene;Acc:423302]
57. DHX8 ENSGALG00000032305 2571 0.866 - - - - - - - 0.866 - - DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
58. KIAA1432 KIAA1432 1792 0.864 - - - 0.864 - - - - - -
59. TRIM62 ENSGALG00000028437 5124 0.862 - - - 0.862 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
60. SHFM1 SHFM1 51606 0.862 - - - - - - 0.862 - - -
61. MLH3 ENSGALG00000010304 231 0.857 - - - 0.857 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
62. ZBTB17 ENSGALG00000035352 280 0.855 - - - 0.855 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
63. KIF6 ENSGALG00000010057 84 0.854 - - - 0.854 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
64. WDR96 WDR96 255 0.853 - - - 0.853 - - - - - -
65. MDH1 ENSGALG00000008858 44636 0.853 - - - - - - 0.853 - - - malate dehydrogenase 1 [Source:NCBI gene;Acc:421281]
66. GFPT2 ENSGALG00000039705 562 0.853 - - - 0.853 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
67. VWDE ENSGALG00000042443 160 0.852 - - - 0.852 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
68. RPS2 ENSGALG00000005490 293634 0.851 - - - - - - 0.851 - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
69. PAXIP1 ENSGALG00000036064 3120 0.851 - - - 0.851 - - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
70. FRRS1 ENSGALG00000005418 332 0.851 - - - 0.851 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
71. ENSGALG00000027412 ENSGALG00000027412 202 0.851 - - - 0.851 - - - - - -
72. DBN1 ENSGALG00000033405 216 0.85 - - - 0.850 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
73. GTF3C4 ENSGALG00000031016 1221 0.849 - - - 0.849 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
74. VPS13B 2293 0.849 - - - 0.849 - - - - - - vacuolar protein sorting 13 homolog B
75. CBX3 ENSGALG00000011038 40977 0.848 - - - 0.848 - - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
76. ELMOD1 ENSGALG00000017169 2303 0.848 - - - 0.848 - - - - - - ELMO domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25334]
77. DHRS11 ENSGALG00000005403 2936 0.848 - - - 0.848 - - - - - - dehydrogenase/reductase 11 [Source:NCBI gene;Acc:395172]
78. SNORA31 SNORA31 183 0.847 - - - 0.847 - - - - - -
79. ENSGALG00000007514 ENSGALG00000007514 4866 0.847 - - - 0.847 - - - - - -
80. IFT43 ENSGALG00000020415 1218 0.846 - - - 0.846 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
81. BAG5 ENSGALG00000031062 4498 0.846 - - - 0.846 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
82. CA3 CA3 200 0.846 - - - 0.846 - - - - - -
83. RNPC3 ENSGALG00000005162 269 0.844 - - - 0.844 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
84. ASRGL1 ENSGALG00000015949 403 0.841 - - - 0.841 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
85. TBK1 ENSGALG00000009840 1650 0.84 - - - 0.840 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
86. NCOA3 ENSGALG00000004570 243 0.839 - - - 0.839 - - - - - - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
87. GALNT12 ENSGALG00000013197 1330 0.839 - - - 0.839 - - - - - - polypeptide N-acetylgalactosaminyltransferase 12 [Source:HGNC Symbol;Acc:HGNC:19877]
88. TCF12 ENSGALG00000004304 63081 0.837 - - - - - - 0.837 - - - transcription factor 12 [Source:NCBI gene;Acc:396334]
89. CHCHD3 ENSGALG00000006489 18592 0.836 - - - 0.836 - - - - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
90. GUF1 ENSGALG00000014217 211 0.835 - - - 0.835 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
91. ATR ENSGALG00000002663 4626 0.835 - - - 0.835 - - - - - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
92. ATG4B ENSGALG00000006298 2288 0.833 - - - 0.833 - - - - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
93. TBC1D30 ENSGALG00000009859 994 0.832 - - - 0.832 - - - - - - TBC1 domain family member 30 [Source:HGNC Symbol;Acc:HGNC:29164]
94. ADCY9 ENSGALG00000007779 766 0.832 - - - 0.832 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
95. COPA ENSGALG00000009153 11618 0.83 - - - 0.830 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
96. ASPH ENSGALG00000030112 1622 0.828 - - - 0.828 - - - - - - aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]
97. MPHOSPH10 ENSGALG00000003906 7029 0.827 - - - 0.827 - - - - - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
98. CXorf23 1582 0.827 - - - 0.827 - - - - - - chromosome X open reading frame 23, transcript variant X3
99. PASK ENSGALG00000006016 3096 0.827 - - - 0.827 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
100. EDN3 ENSGALG00000040880 1061 0.825 - - - 0.825 - - - - - - endothelin 3 [Source:HGNC Symbol;Acc:HGNC:3178]

There are 351 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA