Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX25

Gene Name Gene ID Reads Annotation
SNX25 ENSGALG00000010610 31 sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]











Genes with expression patterns similar to SNX25

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX25 ENSGALG00000010610 31 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 sorting nexin 25 [Source:HGNC Symbol;Acc:HGNC:21883]
2. ARSA ENSGALG00000035824 299 1.857 - - - 0.864 - - - 0.993 - - arylsulfatase A [Source:HGNC Symbol;Acc:HGNC:713]
3. MYO1E ENSGALG00000004150 40 1.712 - - 0.740 - - - - 0.972 - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
4. PSMD4 ENSGALG00000028505 16 1.679 - - - 0.882 - 0.797 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
5. CHIC2 ENSGALG00000013931 21 1.662 - - - - - 0.771 0.891 - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
6. OTOL1 ENSGALG00000026305 14 1.504 - - - - 0.759 - 0.745 - - - otolin 1 [Source:HGNC Symbol;Acc:HGNC:34071]
7. SEC16A ENSGALG00000002364 19 1 - - - - - - - 1.000 - - SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X1
8. AK7 ENSGALG00000011093 9 1 - - - - - - - 1.000 - - adenylate kinase 7 [Source:HGNC Symbol;Acc:HGNC:20091]
9. STK32A ENSGALG00000029195 27 1 - - - - - - 1.000 - - - serine/threonine kinase 32A [Source:NCBI gene;Acc:416351]
10. PALM ENSGALG00000026055 8 1 - - - - - - - 1.000 - - paralemmin [Source:NCBI gene;Acc:101750199]
11. TFRC 31 1 - - - - - - - 1.000 - - transferrin receptor, transcript variant X1
12. FBXO16 7 1 - - - - - - - 1.000 - - F-box protein 16, transcript variant X1
13. FGA ENSGALG00000009266 291 1 - - - - - - - 1.000 - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
14. RPS6KA6 ENSGALG00000007097 94 1 - - - - - - - 1.000 - - ribosomal protein S6 kinase A6 [Source:HGNC Symbol;Acc:HGNC:10435]
15. MCM9 ENSGALG00000014883 8 1 - - - - - - - 1.000 - - minichromosome maintenance 9 homologous recombination repair factor [Source:NCBI gene;Acc:100857742]
16. STARD13 ENSGALG00000017065 18 1 - - - - - - - 1.000 - - StAR related lipid transfer domain containing 13, transcript variant X3
17. TTLL2 ENSGALG00000011344 14 1 - - - - - - - 1.000 - - tubulin tyrosine ligase like 2, transcript variant X1
18. PARP12 ENSGALG00000046187 10 1 - - - - - - - 1.000 - - poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
19. MEST ENSGALG00000008111 1 1 - - - - - - - 1.000 - - mesoderm specific transcript [Source:HGNC Symbol;Acc:HGNC:7028]
20. SMAP2 ENSGALG00000029244 498 1 - - - - - - - 1.000 - - small ArfGAP2 [Source:NCBI gene;Acc:419641]
21. BOK ENSGALG00000005772 117 1 - - - - - - - 1.000 - - BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
22. ALDH6A1 ENSGALG00000010211 29 1 - - - - - - - 1.000 - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
23. AK8 ENSGALG00000040923 10 1 - - - - - - - 1.000 - - adenylate kinase 8, transcript variant X1
24. WDR16 WDR16 22 0.997 - - - - - - - 0.997 - -
25. IL13RA1 ENSGALG00000044480 24 0.997 - - - - - - - 0.997 - - interleukin 13 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:5974]
26. TRIM14 ENSGALG00000015315 22 0.997 - - - - - - - 0.997 - - tripartite motif containing 14 [Source:NCBI gene;Acc:427282]
27. RELN ENSGALG00000008193 43 0.997 - - - - - - - 0.997 - - reelin [Source:NCBI gene;Acc:427850]
28. TMEM255A ENSGALG00000008604 7 0.997 - - - - - - - 0.997 - - transmembrane protein 255A [Source:HGNC Symbol;Acc:HGNC:26086]
29. NTRK1 ENSGALG00000019019 17 0.997 - - - - - - - 0.997 - - neurotrophic receptor tyrosine kinase 1 [Source:NCBI gene;Acc:396337]
30. PACSIN1 ENSGALG00000002802 6 0.987 - - - - - - - 0.987 - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
31. TROJANZ ENSGALG00000027747 37 0.987 - - - - - - - 0.987 - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
32. ASB12 ENSGALG00000007594 185 0.985 - - - - - - - 0.985 - - ankyrin repeat and SOCS box containing 12 [Source:NCBI gene;Acc:422313]
33. SLC35B2 ENSGALG00000010174 3 0.943 - - - - - - - 0.943 - - solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]
34. ARMC2 ENSGALG00000015289 18 0.943 - - - - - - - 0.943 - - armadillo repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:23045]
35. CA12 ENSGALG00000003456 62 0.94 - - - - - - - 0.940 - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
36. RDH11 ENSGALG00000009538 110 0.937 - - - - - - - 0.937 - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
37. EVI2A ENSGALG00000039084 13 0.932 - - - - 0.932 - - - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
38. STAT1 ENSGALG00000007651 24 0.928 - - - - - - - 0.928 - - signal transducer and activator of transcription 1 [Source:NCBI gene;Acc:424044]
39. HEMGN ENSGALG00000045740 8 0.926 - - - - - - - 0.926 - - hemogen, transcript variant X1
40. STK32B ENSGALG00000029510 95 0.918 - - - - - - - 0.918 - - serine/threonine kinase 32B [Source:HGNC Symbol;Acc:HGNC:14217]
41. ZFYVE26 ENSGALG00000028762 18 0.915 - - - - - - - 0.915 - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
42. TEKT4 ENSGALG00000005247 20 0.915 - - - - - - - 0.915 - - tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]
43. SMEK1 SMEK1 95 0.913 - - - - - - - 0.913 - -
44. ENSGALG00000023180 ENSGALG00000023180 83 0.913 - - - - - - - 0.913 - -
45. TDP1 ENSGALG00000010669 57 0.913 - - - - - - - 0.913 - - tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:18884]
46. BRINP3 ENSGALG00000033407 40 0.912 - - - - - - - 0.912 - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
47. RASEF ENSGALG00000012576 155 0.906 - - - - - - - 0.906 - - RAS and EF-hand domain containing [Source:HGNC Symbol;Acc:HGNC:26464]
48. AKAP11 ENSGALG00000022739 82 0.905 - - - - - - - 0.905 - - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
49. SGK196 SGK196 83 0.905 - - - - - 0.905 - - - -
50. CLCA2 8 0.905 - - - - - - - 0.905 - - chloride channel accessory 2, transcript variant X1
51. SNORA17 SNORA17 39 0.905 - - - - - - - 0.905 - -
52. gga-mir-1652 ENSGALG00000025444 119 0.905 - - - - - - - 0.905 - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
53. GABBR2 ENSGALG00000013200 176 0.905 - - - - - - - 0.905 - - gamma-aminobutyric acid type B receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:4507]
54. LOC100858797 ENSGALG00000027167 7 0.891 - - - - - - 0.891 - - - feather keratin 1-like, transcript variant X1
55. PEX5L ENSGALG00000043386 5 0.891 - - - - - - 0.891 - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
56. PEAR1 ENSGALG00000028622 127 0.891 - - - - - - 0.891 - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
57. AIFM3 ENSGALG00000007720 28 0.891 - - - - - - 0.891 - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
58. CLDN18 ENSGALG00000006593 77 0.891 - - - - - - 0.891 - - - claudin 18 [Source:HGNC Symbol;Acc:HGNC:2039]
59. WNT3A ENSGALG00000042657 22 0.891 - - - - - - 0.891 - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
60. ZEB2 ENSGALG00000040465 315 0.891 - - - - - - 0.891 - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
61. ENSGALG00000025727 ENSGALG00000025727 26 0.891 - - - - - - 0.891 - - -
62. HS6ST2 ENSGALG00000034250 42 0.891 - - - - - - 0.891 - - - heparan sulfate 6-O-sulfotransferase 2 [Source:NCBI gene;Acc:395150]
63. ADAMTS10 ENSGALG00000033157 243 0.891 - - - - - - 0.891 - - - ADAM metallopeptidase with thrombospondin type 1 motif 10 [Source:HGNC Symbol;Acc:HGNC:13201]
64. HTR4 ENSGALG00000001383 2 0.891 - - - - - - 0.891 - - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
65. PTCHD3 ENSGALG00000023347 5 0.891 - - - - - - 0.891 - - - patched domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24776]
66. CIPC ENSGALG00000010390 2 0.891 - - - - - - 0.891 - - - CLOCK interacting pacemaker [Source:HGNC Symbol;Acc:HGNC:20365]
67. HDAC3 ENSGALG00000002634 130 0.891 - - - - - - 0.891 - - - histone deacetylase 3 [Source:NCBI gene;Acc:395506]
68. GRB10 ENSGALG00000013100 37 0.891 - - - - - - 0.891 - - - growth factor receptor bound protein 10 [Source:NCBI gene;Acc:420948]
69. MAPK8IP3 ENSGALG00000029514 57 0.891 - - - - - - 0.891 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:6884]
70. PTHRP PTHRP 8 0.891 - - - - - - 0.891 - - -
71. MTMR3 ENSGALG00000008051 9 0.891 - - - - - - 0.891 - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
72. LSM14B ENSGALG00000005125 31 0.891 - - - - - - 0.891 - - - LSM family member 14B [Source:HGNC Symbol;Acc:HGNC:15887]
73. C1orf112 ENSGALG00000032743 8 0.891 - - - - - - 0.891 - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
74. RS1 ENSGALG00000016523 11 0.891 - - - - - - 0.891 - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
75. ENSGALG00000014620 ENSGALG00000014620 7 0.891 - - - - - - 0.891 - - -
76. TMEM45B ENSGALG00000001203 48 0.891 - - - - - - 0.891 - - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
77. C1orf131 C1orf131 141 0.891 - - - - - - 0.891 - - -
78. PFN4 ENSGALG00000019866 53 0.891 - - - - - - 0.891 - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
79. ANKFY1 ENSGALG00000001467 21 0.891 - - - - - - 0.891 - - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
80. ADGB ENSGALG00000012317 28 0.891 - - - - - - 0.891 - - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
81. IGSF11 ENSGALG00000015084 194 0.884 - - - - - - - 0.884 - - Gallus gallus immunoglobulin superfamily member 11 (IGSF11), mRNA. [Source:RefSeq mRNA;Acc:NM_001318422]
82. ARL8A_1 ENSGALG00000000606 23 0.883 - - - - - - - 0.883 - - ADP ribosylation factor like GTPase 8A [Source:NCBI gene;Acc:421175]
83. ESR1 ENSGALG00000012973 3 0.882 - - - 0.882 - - - - - - estrogen receptor 1 [Source:NCBI gene;Acc:396099]
84. ZNF330 ENSGALG00000009868 257 0.882 - - - 0.882 - - - - - - zinc finger protein 330 [Source:NCBI gene;Acc:422453]
85. SNORA44 SNORA44 29 0.882 - - - 0.882 - - - - - -
86. ZFYVE21 ENSGALG00000011534 7 0.882 - - - 0.882 - - - - - - zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
87. EPHA2 ENSGALG00000039895 12 0.882 - - - 0.882 - - - - - - EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]
88. ASPA ENSGALG00000004669 10 0.882 - - - 0.882 - - - - - - aspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]
89. ENSGALG00000005960 ENSGALG00000005960 3 0.882 - - - 0.882 - - - - - -
90. CLCN6 ENSGALG00000004590 3 0.882 - - - 0.882 - - - - - - chloride voltage-gated channel 6 [Source:NCBI gene;Acc:419488]
91. TDRD1 ENSGALG00000046180 612 0.876 - - - - - 0.876 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
92. ENSGALG00000013110 ENSGALG00000013110 51 0.876 - - - 0.876 - - - - - -
93. MAPKAPK3 ENSGALG00000002283 30 0.873 - - - 0.873 - - - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
94. PPP1R1C ENSGALG00000008896 378 0.872 - - - - - - - 0.872 - - protein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]
95. PTPRO ENSGALG00000013085 26 0.872 - - - 0.872 - - - - - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
96. NPHS2 ENSGALG00000004163 850 0.871 - - - - - - - 0.871 - - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
97. TMTC4 ENSGALG00000016870 40 0.87 - - - - - - - 0.870 - - transmembrane and tetratricopeptide repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:25904]
98. MYOD1 ENSGALG00000006216 568 0.86 - - - - - - - 0.860 - - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
99. CRYGS ENSGALG00000006574 9 0.857 - - - - 0.857 - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
100. FIBCD1 ENSGALG00000003866 2 0.855 - - - - - 0.855 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA