Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNX2

Gene Name Gene ID Reads Annotation
SNX2 ENSGALG00000005337 590 sorting nexin 2 [Source:NCBI gene;Acc:426797]











Genes with expression patterns similar to SNX2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX2 ENSGALG00000005337 590 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 2 [Source:NCBI gene;Acc:426797]
2. TSN ENSGALG00000011652 905 1.759 - - 0.927 - - - - - 0.832 - translin [Source:NCBI gene;Acc:395955]
3. GNMT ENSGALG00000043290 3288 1.754 - - 0.887 - - - - - 0.867 - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
4. KLHL15 ENSGALG00000016345 1638 1.733 - - 0.853 - - - - - 0.880 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
5. RUFY2 1442 1.723 - - 0.887 - - - - - 0.836 - RUN and FYVE domain containing 2, transcript variant X1
6. ENSGALG00000023180 ENSGALG00000023180 83 1.72 - - 0.943 0.777 - - - - - -
7. PIH1D3 ENSGALG00000004870 1365 1.71 - - 0.902 - - - - - 0.808 - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
8. BMP2 ENSGALG00000029301 379 1.709 - - 0.942 0.767 - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
9. TSEN2 ENSGALG00000004981 1929 1.67 - - 0.939 - - - - - 0.731 - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
10. ZEB2 ENSGALG00000040465 315 1.667 - - 0.934 - - - - - 0.733 - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
11. GNS ENSGALG00000009856 3045 1.648 - - 0.841 - - - - - 0.807 - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
12. FAM110D ENSGALG00000046085 2193 1.634 - - 0.856 - - - - - 0.778 - family with sequence similarity 110 member D [Source:HGNC Symbol;Acc:HGNC:25860]
13. WDR47 ENSGALG00000002129 2624 1.609 - - 0.864 - - - - - 0.745 - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
14. CCT7 ENSGALG00000016088 2824 1.584 - - 0.843 - - - - - 0.741 - chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
15. INPP5F ENSGALG00000009445 1911 1.583 - - 0.817 - - - - - 0.766 - inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:HGNC:17054]
16. RBM5 30998 1.559 - - 0.806 - - - - - 0.753 - RNA binding motif protein 5, transcript variant X1
17. TLN1 ENSGALG00000002548 489 1.556 - - - 0.757 - - - - 0.799 - talin 1 [Source:NCBI gene;Acc:395194]
18. C1H13ORF27 C1H13ORF27 635 1.534 - - - - - - - - 0.753 0.781
19. RIT1 ENSGALG00000014647 7174 1.515 - - 0.808 - - - - - 0.707 - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
20. CDK9 ENSGALG00000035576 3659 1.501 - - 0.786 - - - - - 0.715 - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
21. CCNC ENSGALG00000015471 6497 1.485 - - 0.742 - - - - - 0.743 - cyclin C [Source:NCBI gene;Acc:421791]
22. MRPL46 ENSGALG00000006782 5033 1.477 - - 0.709 - - - - - 0.768 - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
23. PDCD4 ENSGALG00000008700 574 0.96 - - 0.960 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
24. PVALB1 PVALB1 267 0.953 - - 0.953 - - - - - - -
25. NLGN1 ENSGALG00000040938 651 0.953 - - 0.953 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
26. WBSCR17 581 0.95 - - 0.950 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
27. TMEM200C ENSGALG00000030210 1434 0.949 - - 0.949 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
28. DLX5 ENSGALG00000009129 1395 0.948 - - 0.948 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
29. TRANK1 ENSGALG00000037629 2268 0.946 - - 0.946 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
30. DBR1 ENSGALG00000043797 1896 0.945 - - 0.945 - - - - - - - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
31. POMC ENSGALG00000016600 99 0.943 - - 0.943 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
32. PLEKHG5 ENSGALG00000027476 42 0.943 - - 0.943 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
33. MT1 MT1 218 0.943 - - 0.943 - - - - - - -
34. RHOC ENSGALG00000001569 53 0.943 - - 0.943 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
35. KIAA0195 KIAA0195 48 0.943 - - 0.943 - - - - - - -
36. ADAMTS2 ENSGALG00000032974 141 0.943 - - 0.943 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
37. GRIK3 ENSGALG00000002098 111 0.942 - - 0.942 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
38. MGMT ENSGALG00000042949 53 0.942 - - 0.942 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
39. MYO18A ENSGALG00000003741 1023 0.942 - - 0.942 - - - - - - - myosin XVIIIA [Source:HGNC Symbol;Acc:HGNC:31104]
40. C-MET C-MET 1650 0.942 - - 0.942 - - - - - - -
41. PTPN5 ENSGALG00000006368 440 0.941 - - 0.941 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
42. TMEM97 ENSGALG00000005702 2037 0.938 - - 0.938 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
43. BARX2B BARX2B 1983 0.938 - - 0.938 - - - - - - -
44. NCAPD3 ENSGALG00000001491 221 0.934 - - 0.934 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
45. GOLGA2 ENSGALG00000004881 677 0.932 - - 0.932 - - - - - - - golgin A2, transcript variant X7
46. LGALS3 ENSGALG00000012173 3306 0.932 - - 0.932 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
47. LHFP 167 0.93 - - 0.930 - - - - - - - lipoma HMGIC fusion partner
48. ATG10 ENSGALG00000027714 1100 0.929 - - 0.929 - - - - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
49. ATP2B2 ENSGALG00000030908 584 0.928 - - 0.928 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
50. LARS2 ENSGALG00000036309 2624 0.928 - - 0.928 - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:17095]
51. ACOT9 ENSGALG00000016351 330 0.926 - - 0.926 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
52. AP3M1 ENSGALG00000005070 712 0.926 - - 0.926 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
53. ZNF423 ENSGALG00000003891 103 0.925 - - 0.925 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
54. MAN1A1 ENSGALG00000014878 1061 0.925 - - 0.925 - - - - - - - mannosidase alpha class 1A member 1 [Source:HGNC Symbol;Acc:HGNC:6821]
55. PKP4 ENSGALG00000012561 3087 0.924 - - 0.924 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
56. GBGT1 ENSGALG00000003340 399 0.924 - - 0.924 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
57. ENTPD5 ENSGALG00000010202 69 0.924 - - 0.924 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
58. LYPD6B ENSGALG00000028759 831 0.924 - - 0.924 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
59. RPUSD1 ENSGALG00000005315 651 0.923 - - 0.923 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
60. SORCS1 ENSGALG00000008465 468 0.923 - - 0.923 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
61. FBXO34 ENSGALG00000032563 656 0.923 - - 0.923 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
62. BCCIP ENSGALG00000006617 13291 0.923 - - 0.923 - - - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
63. C8H1ORF52 C8H1ORF52 118 0.922 - - 0.922 - - - - - - -
64. LRP2 ENSGALG00000010858 363 0.922 - - 0.922 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]
65. SLC4A4 ENSGALG00000031105 534 0.921 - - 0.921 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
66. WDR60 1631 0.921 - - 0.921 - - - - - - - WD repeat domain 60, transcript variant X4
67. EIF2AK2 ENSGALG00000010560 749 0.92 - - 0.920 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
68. RFFL ENSGALG00000002225 928 0.92 - - - - - - - - 0.920 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
69. IP6K1 ENSGALG00000002510 827 0.92 - - 0.920 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
70. DDX18 ENSGALG00000012147 12463 0.92 - - 0.920 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
71. PELI1 ENSGALG00000008837 11561 0.919 - - 0.919 - - - - - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
72. TRIM45 ENSGALG00000014818 1258 0.918 - - 0.918 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
73. DLG3 ENSGALG00000041900 3016 0.918 - - 0.918 - - - - - - - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
74. CASP1 ENSGALG00000001049 1067 0.917 - - 0.917 - - - - - - - caspase 1, transcript variant X2
75. CXorf30 CXorf30 172 0.917 - - 0.917 - - - - - - -
76. KIAA0930 ENSGALG00000014226 1243 0.916 - - 0.916 - - - - - - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
77. DUS2 856 0.915 - - - - - - - - 0.915 - dihydrouridine synthase 2, transcript variant X2
78. C5H14ORF166 C5H14ORF166 24176 0.915 - - 0.915 - - - - - - -
79. C19H17ORF85 C19H17ORF85 2538 0.914 - - 0.914 - - - - - - -
80. PTDSS1 ENSGALG00000030185 5515 0.914 - - 0.914 - - - - - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
81. ETV4 ENSGALG00000036678 2424 0.914 - - 0.914 - - - - - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
82. ZC3H13 ENSGALG00000016984 21043 0.913 - - 0.913 - - - - - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
83. RAB3B ENSGALG00000010567 894 0.913 - - 0.913 - - - - - - - RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
84. SULT2B1L1 ENSGALG00000023472 569 0.911 - - 0.911 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
85. ALMS1 ENSGALG00000044620 570 0.911 - - - - - - - - 0.911 - ALMS1, centrosome and basal body associated protein, transcript variant X1
86. TFAP2B ENSGALG00000016680 829 0.911 - - 0.911 - - - - - - - transcription factor AP-2 beta [Source:NCBI gene;Acc:395713]
87. LZIC ENSGALG00000002616 9052 0.91 - - 0.910 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
88. MARVELD2 ENSGALG00000027140 828 0.91 - - - - - - - - 0.910 - MARVEL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26401]
89. METTL6 ENSGALG00000040665 4467 0.908 - - 0.908 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
90. CCDC25 ENSGALG00000016586 351 0.908 - - 0.908 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
91. FBF1 ENSGALG00000002179 1738 0.907 - - 0.907 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
92. ENSGALG00000028359 ENSGALG00000028359 479 0.906 - - 0.906 - - - - - - -
93. LHCGR ENSGALG00000009095 174 0.904 - - - - - - - - 0.904 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
94. NAT9 ENSGALG00000007723 2098 0.904 - - 0.904 - - - - - - - N-acetyltransferase 9 (putative), transcript variant X7
95. EXTL2 ENSGALG00000027984 808 0.903 - - 0.903 - - - - - - - exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
96. Sep-02 Sep-02 206 0.903 - - 0.903 - - - - - - -
97. EPB41 ENSGALG00000001329 787 0.902 - - 0.902 - - - - - - - erythrocyte membrane protein band 4.1 [Source:NCBI gene;Acc:396493]
98. FGD5 ENSGALG00000008546 4031 0.9 - - - - - - - - 0.900 - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
99. ITPR1 ENSGALG00000008294 1226 0.9 - - 0.900 - - - - - - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
100. MAK16 ENSGALG00000001663 7455 0.9 - - 0.900 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]

There are 654 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA