Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX18

Gene Name Gene ID Reads Annotation
SNX18 ENSGALG00000014914 7 sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]











Genes with expression patterns similar to SNX18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX18 ENSGALG00000014914 7 3 - - 1.000 - - - 1.000 1.000 - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
2. POMGNT2 ENSGALG00000011518 36 1.923 - - 0.955 - - - - 0.968 - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
3. PLXNB1 23 1.879 - - 0.879 - - - 1.000 - - - plexin B1, transcript variant X2
4. SPNS3 ENSGALG00000001410 173 1.57 - - - - - - 0.774 0.796 - - sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]
5. ENSGALG00000001483 ENSGALG00000001483 215 1 - - - - - - - 1.000 - -
6. ENSGALG00000026668 ENSGALG00000026668 34 1 - - - - - - - 1.000 - -
7. TNN ENSGALG00000004538 21 1 - - - - - - - 1.000 - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
8. FBXO43 ENSGALG00000038940 7 1 - - - - - - - 1.000 - - F-box protein 43 [Source:HGNC Symbol;Acc:HGNC:28521]
9. PRLL ENSGALG00000009603 30 1 - - - - - - - 1.000 - - prolactin-like protein [Source:NCBI gene;Acc:417800]
10. CYP2J19 ENSGALG00000011413 22 1 - - - - - - 1.000 - - - cytochrome P450, family 2, subfamily J, polypeptide 19
11. ENSGALG00000007003 ENSGALG00000007003 2 1 - - - - - - - 1.000 - -
12. HPGDS ENSGALG00000010402 343 1 - - - - - - 1.000 - - - hematopoietic prostaglandin D synthase [Source:NCBI gene;Acc:395863]
13. WFIKKN2 ENSGALG00000007367 9 1 - - - - - - 1.000 - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30916]
14. TTC9 ENSGALG00000017652 16 1 - - - - - - 1.000 - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
15. SESN3 ENSGALG00000017204 7 1 - - - - - - - 1.000 - - sestrin 3, transcript variant X2
16. SH3BP5 ENSGALG00000039337 17 1 - - - - - - - 1.000 - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
17. ENSGALG00000024306 ENSGALG00000024306 0 1 - - - - - - - 1.000 - -
18. gga-mir-1801 ENSGALG00000025241 13 1 - - - - - - - 1.000 - - gga-mir-1801 [Source:miRBase;Acc:MI0007545]
19. TTC7B ENSGALG00000010680 4 1 - - - - - - - 1.000 - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
20. LNX1 ENSGALG00000013940 2 1 - - - - - - - 1.000 - - ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:HGNC:6657]
21. CIB3 ENSGALG00000003978 2 1 - - - - - - - 1.000 - - calcium and integrin binding family member 3 [Source:HGNC Symbol;Acc:HGNC:24580]
22. CMC4 ENSGALG00000023937 15 1 - - - - - - - 1.000 - - C-X9-C motif containing 4 [Source:HGNC Symbol;Acc:HGNC:35428]
23. ENSGALG00000023475 ENSGALG00000023475 19 1 - - - - - - - 1.000 - -
24. ZNF362 ENSGALG00000026558 11 1 - - - - - - 1.000 - - - zinc finger protein 362 [Source:HGNC Symbol;Acc:HGNC:18079]
25. ZNF814 ZNF814 13 1 - - - - - - - 1.000 - -
26. DRD2 ENSGALG00000007794 399 1 - - - - - - 1.000 - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
27. RGR ENSGALG00000002299 17 1 - - - - - - - 1.000 - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
28. STEAP4 ENSGALG00000008997 8 1 - - - - - - - 1.000 - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
29. ADSSL1 ENSGALG00000011618 85 1 - - - - - - - 1.000 - - adenylosuccinate synthase like 1 [Source:HGNC Symbol;Acc:HGNC:20093]
30. ATHL1 ATHL1 16 1 - - - - - - - 1.000 - -
31. NKX2-5 ENSGALG00000002886 81 1 - - - - - - 1.000 - - - NK2 homeobox 5 [Source:NCBI gene;Acc:396073]
32. ENSGALG00000000865 ENSGALG00000000865 46 1 - - - - - - 1.000 - - -
33. CHADL ENSGALG00000011970 42 1 - - - - - - 1.000 - - - chondroadherin-like [Source:NCBI gene;Acc:417998]
34. ENSGALG00000020616 ENSGALG00000020616 3 1 - - - - - - - 1.000 - -
35. ALPI ENSGALG00000023866 19 1 - - - - - - - 1.000 - - alkaline phosphatase, intestinal, transcript variant X2
36. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - 1.000 - -
37. LRRC34 ENSGALG00000009402 3 1 - - - - - - - 1.000 - - leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:HGNC:28408]
38. ENSGALG00000000407 ENSGALG00000000407 32 0.986 - - - - - - - 0.986 - -
39. BNIP2 ENSGALG00000003788 38 0.986 - - - - - - - 0.986 - - BCL2 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:1083]
40. CALB1 ENSGALG00000032282 16 0.984 - - - - - - 0.984 - - - calbindin 1 [Source:NCBI gene;Acc:396519]
41. CHOBF-1 CHOBF-1 41 0.958 - - - - - - 0.958 - - -
42. SNX8 ENSGALG00000004255 4 0.955 - - 0.955 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
43. ZMAT4 ENSGALG00000003470 2 0.955 - - 0.955 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
44. CLRN2 ENSGALG00000027453 3 0.955 - - 0.955 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
45. TNFAIP3 ENSGALG00000013861 11 0.955 - - 0.955 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
46. LOXHD1 ENSGALG00000037829 3 0.955 - - 0.955 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
47. ENSGALG00000009041 ENSGALG00000009041 27 0.955 - - 0.955 - - - - - - -
48. GAN ENSGALG00000013437 11 0.955 - - 0.955 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
49. GPD1L2 ENSGALG00000012061 31 0.955 - - 0.955 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
50. ENSGALG00000026347 ENSGALG00000026347 2 0.955 - - 0.955 - - - - - - -
51. CNGA2 ENSGALG00000007282 2 0.955 - - 0.955 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
52. LRP3 ENSGALG00000004853 13 0.955 - - 0.955 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
53. TLL2 ENSGALG00000005519 10 0.955 - - 0.955 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
54. FHL2 ENSGALG00000016797 11 0.955 - - 0.955 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
55. CACNA1B ENSGALG00000008456 143 0.953 - - - - - - - 0.953 - - calcium voltage-gated channel subunit alpha1 B [Source:NCBI gene;Acc:374169]
56. LRRC49 ENSGALG00000004059 29 0.95 - - 0.950 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
57. VWA1 ENSGALG00000001527 79 0.948 - - - - - - 0.948 - - - von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
58. TSC1 34 0.942 - - - - - - - 0.942 - - tuberous sclerosis 1, transcript variant X1
59. EIF2B5 ENSGALG00000008376 36 0.942 - - - - - - - 0.942 - - eukaryotic translation initiation factor 2B subunit epsilon [Source:HGNC Symbol;Acc:HGNC:3261]
60. SYCP1 ENSGALG00000002511 13 0.939 - - 0.939 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
61. SLC17A6 ENSGALG00000039254 16 0.938 - - 0.938 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
62. HOXB13 ENSGALG00000033154 71 0.937 - - 0.937 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
63. YES1 ENSGALG00000014860 31 0.934 - - - - - - 0.934 - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
64. SCUBE1 ENSGALG00000014178 91 0.932 - - - - - - - 0.932 - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
65. U4atac U4atac 23 0.931 - - 0.931 - - - - - - -
66. OSBPL3 ENSGALG00000011007 23 0.929 - - - - - - 0.929 - - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
67. DCUN1D3 ENSGALG00000002267 6 0.928 - - 0.928 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
68. TGM4 ENSGALG00000033171 19 0.927 - - 0.927 - - - - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
69. CALR3 ENSGALG00000003914 8 0.923 - - 0.923 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
70. SERAC1 ENSGALG00000013732 24 0.921 - - 0.921 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
71. SCN5A ENSGALG00000006112 137 0.917 - - - - - - 0.917 - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
72. KIAA0319L ENSGALG00000002445 75 0.917 - - - - - - 0.917 - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
73. B4GALNT3 ENSGALG00000012988 12 0.916 - - 0.916 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
74. TRPM1 ENSGALG00000003849 5 0.916 - - 0.916 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
75. SLC35A3 12 0.916 - - 0.916 - - - - - - - solute carrier family 35 member A3, transcript variant X7
76. ENSGALG00000001323 ENSGALG00000001323 3 0.916 - - 0.916 - - - - - - -
77. TNPO1 ENSGALG00000015014 57 0.911 - - 0.911 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
78. GCM2 ENSGALG00000012768 6 0.905 - - 0.905 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
79. MIF4GD ENSGALG00000026715 41 0.891 - - - - - - 0.891 - - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
80. UNC93B1 ENSGALG00000039347 342 0.891 - - - - - - 0.891 - - - unc-93 homolog B1 (C. elegans), transcript variant X6
81. SGSM2 ENSGALG00000005737 95 0.89 - - - - - - 0.890 - - - small G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29026]
82. TNIP1 ENSGALG00000004496 355 0.885 - - - - - - - 0.885 - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
83. PLTP ENSGALG00000036686 79 0.885 - - 0.885 - - - - - - - phospholipid transfer protein [Source:NCBI gene;Acc:428164]
84. DOCK5 ENSGALG00000000311 51 0.885 - - 0.885 - - - - - - - dedicator of cytokinesis 5, transcript variant X2
85. CAPSL ENSGALG00000013376 22 0.882 - - - - - - 0.882 - - - calcyphosine like [Source:HGNC Symbol;Acc:HGNC:28375]
86. FXR FXR 52 0.881 - - - - - - 0.881 - - -
87. HOXB1 ENSGALG00000013454 9 0.88 - - 0.880 - - - - - - - homeobox B1 [Source:NCBI gene;Acc:395900]
88. UPF3A ENSGALG00000016815 48 0.879 - - 0.879 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
89. TMEM117 ENSGALG00000009596 48 0.878 - - - - - - 0.878 - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
90. LRRTM1 ENSGALG00000015967 85 0.876 - - - - - - 0.876 - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
91. MCT2L ENSGALG00000007596 127 0.875 - - 0.875 - - - - - - - monocarboxylate transporter 2-like, transcript variant X5
92. DLST ENSGALG00000010286 19 0.875 - - 0.875 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
93. TMEM63B ENSGALG00000010282 7 0.872 - - 0.872 - - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
94. ENSGALG00000016572 ENSGALG00000016572 79 0.871 - - - - - - 0.871 - - -
95. FEM1B ENSGALG00000028906 4 0.87 - - 0.870 - - - - - - - fem-1 homolog B [Source:NCBI gene;Acc:415559]
96. ADAM17 ENSGALG00000016427 49 0.869 - - 0.869 - - - - - - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
97. PPHLN1 ENSGALG00000009547 30 0.869 - - 0.869 - - - - - - - periphilin 1 [Source:NCBI gene;Acc:417792]
98. CRHBP ENSGALG00000014994 8 0.869 - - - - - - 0.869 - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
99. PARP3 ENSGALG00000004517 331 0.869 - - - - - - 0.869 - - - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
100. FBP2 ENSGALG00000012612 17 0.863 - - 0.863 - - - - - - - fructose-bisphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3607]

There are 112 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA