Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX17

Gene Name Gene ID Reads Annotation
SNX17 ENSGALG00000032468 13519 sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]











Genes with expression patterns similar to SNX17

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX17 ENSGALG00000032468 13519 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
2. STAG2 ENSGALG00000008482 13629 0.994 - - - - - - 0.994 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
3. TAF12 ENSGALG00000000991 8709 0.99 - - - - - - 0.990 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
4. LOC407092 ENSGALG00000013809 10706 0.988 - - - - - - 0.988 - - - AD012Z, transcript variant X5
5. DDX18 ENSGALG00000012147 12463 0.985 - - - - - - 0.985 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
6. VDAC3 ENSGALG00000041463 21595 0.978 - - - - - - 0.978 - - - voltage dependent anion channel 3, transcript variant X9
7. CDC27 ENSGALG00000000596 12014 0.958 - - - - - - 0.958 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
8. SAAL1 ENSGALG00000026111 8340 0.957 - - - - - - 0.957 - - - serum amyloid A like 1
9. APITD1 APITD1 11830 0.95 - - - - - - 0.950 - - -
10. GSDMA ENSGALG00000013495 1650 0.948 - - - - - - 0.948 - - - gasdermin A [Source:NCBI gene;Acc:426132]
11. MMADHC ENSGALG00000012473 9026 0.948 - - - - - - 0.948 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
12. CRAC1A CRAC1A 5265 0.948 - - - - - - 0.948 - - -
13. gga-mir-1723 ENSGALG00000025386 6662 0.948 - - - - - - 0.948 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
14. GLT8D1 ENSGALG00000001642 4232 0.948 - - - - - - 0.948 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
15. DIS3 ENSGALG00000016930 3696 0.948 - - - - - - 0.948 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
16. GDPD4 ENSGALG00000000690 824 0.948 - - - - - - 0.948 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
17. LOC425795 ENSGALG00000027696 2357 0.947 - - - - - - 0.947 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
18. DNAJC10 ENSGALG00000008862 3114 0.947 - - - - - - 0.947 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
19. LYVE1 ENSGALG00000005643 1230 0.947 - - - - - - 0.947 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
20. LUZP2 ENSGALG00000030151 585 0.947 - - - - - - 0.947 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
21. RPUSD4 ENSGALG00000024326 3788 0.947 - - - - - - 0.947 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
22. C6H10ORF32 C6H10ORF32 7694 0.947 - - - - - - 0.947 - - -
23. CCDC90B ENSGALG00000037072 5088 0.947 - - - - - - 0.947 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
24. ATPAF2 ENSGALG00000004926 3393 0.947 - - - - - - 0.947 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
25. ZNF276 ENSGALG00000000513 2410 0.947 - - - - - - 0.947 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
26. SNAPIN ENSGALG00000026796 11155 0.947 - - - - - - 0.947 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
27. MYBL2 ENSGALG00000003503 15875 0.947 - - - - - - 0.947 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
28. CHL1 ENSGALG00000037856 1565 0.947 - - - - - - 0.947 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
29. CSDE1 ENSGALG00000002139 1683 0.947 - - - - - - 0.947 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
30. GALNTL4 GALNTL4 3548 0.946 - - - - - - 0.946 - - -
31. MAPT ENSGALG00000000625 659 0.946 - - - - - - 0.946 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
32. LHFPL2 ENSGALG00000004437 500 0.946 - - - - - - 0.946 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
33. ENSGALG00000006730 ENSGALG00000006730 3695 0.946 - - - - - - 0.946 - - -
34. GCAT ENSGALG00000012312 7906 0.946 - - - - - - 0.946 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
35. PRKG1 ENSGALG00000003805 4654 0.945 - - - - - - 0.945 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
36. FHL3 ENSGALG00000035187 9753 0.945 - - - - - - 0.945 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
37. TTF1 4214 0.945 - - - - - - 0.945 - - - transcription termination factor 1
38. SAV1 ENSGALG00000012341 3313 0.945 - - - - - - 0.945 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
39. CTNNBL1 ENSGALG00000006817 6765 0.945 - - - - - - 0.945 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
40. COMMD8 ENSGALG00000026279 13509 0.944 - - - - - - 0.944 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
41. USO1 ENSGALG00000010878 9506 0.943 - - - - - - 0.943 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
42. SERBP1 ENSGALG00000011229 30489 0.943 - - - - - - 0.943 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
43. LOC424109 ENSGALG00000008738 3932 0.943 - - - - - - 0.943 - - - alpha-aspartyl dipeptidase
44. SPINT1 ENSGALG00000008469 5735 0.942 - - - - - - 0.942 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
45. NOB1 ENSGALG00000000693 15442 0.941 - - - - - - 0.941 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
46. POLB ENSGALG00000040828 7462 0.941 - - - - - - 0.941 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
47. TP53INP1 ENSGALG00000041353 6890 0.941 - - - - - - 0.941 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
48. POLR2C ENSGALG00000001168 10703 0.94 - - - - - - 0.940 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
49. RNF13 ENSGALG00000010411 8749 0.94 - - - - - - 0.940 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
50. CCAR1 ENSGALG00000004108 13219 0.939 - - - - - - 0.939 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
51. PRDX4 ENSGALG00000016357 32208 0.939 - - - - - - 0.939 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
52. SH3RF3 ENSGALG00000016810 2169 0.939 - - - - - - 0.939 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
53. PPP3CB ENSGALG00000005243 8794 0.938 - - - - - - 0.938 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
54. FGD5 ENSGALG00000008546 4031 0.937 - - - - - - 0.937 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
55. CNBP 42704 0.936 - - - - - - 0.936 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
56. PSMD13 ENSGALG00000043684 14720 0.936 - - - - - - 0.936 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
57. MRPS15 ENSGALG00000044433 15356 0.936 - - - - - - 0.936 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
58. CDC5L ENSGALG00000016704 22893 0.935 - - - - - - 0.935 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
59. MOB4 ENSGALG00000008128 10322 0.935 - - - - - - 0.935 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
60. EPHA3 ENSGALG00000015403 9811 0.935 - - - - - - 0.935 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
61. ANLN 10479 0.935 - - - - - - 0.935 - - - anillin actin binding protein, transcript variant X2
62. MRPS34 ENSGALG00000001792 14262 0.934 - - - - - - 0.934 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
63. ABRACL ENSGALG00000013826 19445 0.933 - - - - - - 0.933 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
64. ACTR6 ENSGALG00000040976 31271 0.93 - - - - - - 0.930 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
65. MRPS36 ENSGALG00000014789 7584 0.927 - - - - - - 0.927 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
66. RPF1 ENSGALG00000008796 9809 0.926 - - - - - - 0.926 - - - ribosome production factor 1 homolog
67. CHPKCI CHPKCI 36217 0.925 - - - - - - 0.925 - - -
68. ENSGALG00000013825 ENSGALG00000013825 16473 0.916 - - - - - - 0.916 - - -
69. MRPS26 ENSGALG00000014118 27422 0.915 - - - - - - 0.915 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
70. PELI1 ENSGALG00000008837 11561 0.914 - - - - - - 0.914 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
71. MED1 ENSGALG00000001708 9556 0.912 - - - - - - 0.912 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
72. TRIB2 ENSGALG00000016457 17641 0.911 - - - - - - 0.911 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
73. CCT5 ENSGALG00000013041 56190 0.909 - - - - - - 0.909 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
74. EXOSC7 ENSGALG00000030084 8654 0.905 - - - - - - 0.905 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
75. EZH2 ENSGALG00000043399 15881 0.905 - - - - - - 0.905 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
76. CLPX ENSGALG00000007289 6348 0.904 - - - - - - - 0.904 - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
77. ZDHHC6 ENSGALG00000008870 16575 0.903 - - - - - - 0.903 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
78. CCNG1 ENSGALG00000001718 9873 0.902 - - - - - - - 0.902 - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
79. ENSGALG00000000360 ENSGALG00000000360 15320 0.899 - - - - - - 0.899 - - -
80. TBL1X ENSGALG00000040006 28597 0.898 - - - - - - 0.898 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
81. TPI1 ENSGALG00000014526 43273 0.896 - - - - - - 0.896 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
82. GMPS ENSGALG00000010284 8765 0.891 - - - - - - - 0.891 - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
83. BUB3 ENSGALG00000009681 36055 0.89 - - - - - - 0.890 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
84. HDLBP ENSGALG00000005823 24636 0.889 - - - - - - 0.889 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
85. PRDX1 ENSGALG00000010243 151918 0.888 - - - - - - 0.888 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
86. Sep-15 Sep-15 6935 0.884 - - - - - - - 0.884 - -
87. TRA2A ENSGALG00000010973 37101 0.879 - - - - - - 0.879 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
88. GPR125 GPR125 2753 0.87 - - - - - - - 0.870 - -
89. FAM193A ENSGALG00000015667 3075 0.869 - - - - - - - 0.869 - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
90. KIAA2026 ENSGALG00000015050 4659 0.863 - - - - - - - 0.863 - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
91. CENPE ENSGALG00000013208 12337 0.863 - - - - - - - 0.863 - - centromere protein E, transcript variant X4
92. SNRPB2 28675 0.863 - - - - - - 0.863 - - - small nuclear ribonucleoprotein polypeptide B2
93. DUSP7 ENSGALG00000041650 1946 0.86 - - - - - - - 0.860 - - Gallus gallus dual specificity phosphatase 7 (DUSP7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318409]
94. WLS ENSGALG00000011238 20969 0.858 - - - - - - 0.858 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
95. RBM26 ENSGALG00000016910 13769 0.856 - - - - - - - 0.856 - - RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
96. YWHAQ ENSGALG00000016433 3450 0.855 - - - - - - - 0.855 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
97. MED28 ENSGALG00000007138 7686 0.843 - - - - - - - 0.843 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
98. ARGLU1 ENSGALG00000016855 25633 0.839 - - - - - - 0.839 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
99. BAIAP2 ENSGALG00000042538 1365 0.838 - - - - - - - 0.838 - - BAI1 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:947]
100. PRMT3 ENSGALG00000003958 14160 0.814 - - - - - - - 0.814 - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]

There are 25 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA