Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNX16

Gene Name Gene ID Reads Annotation
SNX16 ENSGALG00000029678 1104 sorting nexin 16 [Source:NCBI gene;Acc:420202]











Genes with expression patterns similar to SNX16

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX16 ENSGALG00000029678 1104 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sorting nexin 16 [Source:NCBI gene;Acc:420202]
2. AP1S2 ENSGALG00000016551 421 1.639 - - - - - - 0.881 - 0.758 - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
3. PLXNB2 ENSGALG00000039861 338 1.615 - - 0.750 - - - 0.865 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
4. WDR59 ENSGALG00000002798 815 1.595 - - - - - - 0.879 - 0.716 - WD repeat domain 59 [Source:NCBI gene;Acc:415688]
5. ENSGALG00000020883 ENSGALG00000020883 299 1.562 - - - - - 0.746 0.816 - - -
6. TOR4A ENSGALG00000008623 1364 1.509 - - - - - 0.723 0.786 - - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
7. TFAP2C ENSGALG00000007690 768 0.924 - - - - - - 0.924 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
8. CCDC135 CCDC135 220 0.921 - - - - - - 0.921 - - -
9. ZC3H12C ENSGALG00000017154 59 0.918 - - - - - - 0.918 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
10. CFH ENSGALG00000002431 31 0.918 - - - - - - 0.918 - - - complement factor H, transcript variant X1
11. RAPGEF5 ENSGALG00000034024 1264 0.917 - - - - - - 0.917 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
12. NBEAL2 ENSGALG00000039120 277 0.916 - - - - - - 0.916 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
13. FICD ENSGALG00000004858 171 0.914 - - - - - - 0.914 - - - FIC domain containing [Source:HGNC Symbol;Acc:HGNC:18416]
14. GPSM2 ENSGALG00000002090 50 0.913 - - - - - - 0.913 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
15. NCBP2 ENSGALG00000006843 938 0.912 - - - - - - 0.912 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
16. DPYSL4 ENSGALG00000010490 3431 0.912 - - - - - - 0.912 - - - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
17. UBAC2 ENSGALG00000016880 1343 0.911 - - - - - - 0.911 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
18. WBP2NL ENSGALG00000011908 23 0.911 - - - - - - 0.911 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
19. ENSGALG00000003817 ENSGALG00000003817 45 0.91 - - - - - - 0.910 - - -
20. MICAL3 ENSGALG00000013042 90 0.91 - - - - - - 0.910 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
21. SCN9A ENSGALG00000027793 161 0.91 - - - - - - 0.910 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
22. SKI ENSGALG00000001229 50 0.909 - - - - - - 0.909 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
23. TRPC6 ENSGALG00000029416 281 0.909 - - - - - - 0.909 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
24. NPY2R ENSGALG00000009280 29 0.908 - - - - - - 0.908 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
25. ARHGAP20 ENSGALG00000017150 100 0.908 - - - - - - 0.908 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
26. TMEM150C ENSGALG00000011175 218 0.907 - - - - - - 0.907 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
27. C5NT1AL ENSGALG00000006608 277 0.905 - - - - - - 0.905 - - - cytosolic 5'-nucleotidase 1A-like, transcript variant X2
28. C8G ENSGALG00000040644 443 0.904 - - - - - - 0.904 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
29. LOH12CR1 LOH12CR1 862 0.901 - - - - - - - - 0.901 -
30. IMPAD1 ENSGALG00000041573 801 0.901 - - - - - - 0.901 - - - inositol monophosphatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26019]
31. MAN1B1 ENSGALG00000037375 308 0.896 - - - - - - 0.896 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
32. CVG1 CVG1 636 0.896 - - - - - - 0.896 - - -
33. TMEM248 ENSGALG00000033954 248 0.896 - - - - - - 0.896 - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
34. RALGAPA2 240 0.893 - - - - - - 0.893 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
35. SLC27A6 ENSGALG00000000184 98 0.893 - - - - - - 0.893 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
36. CCK ENSGALG00000029788 213 0.893 - - - - - - 0.893 - - - cholecystokinin [Source:NCBI gene;Acc:414884]
37. PCYOX1L ENSGALG00000040340 2162 0.893 - - - - - - 0.893 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
38. CTSB ENSGALG00000030016 177 0.891 - - - - - - 0.891 - - - cathepsin B [Source:NCBI gene;Acc:396329]
39. PLEK2 ENSGALG00000009562 706 0.89 - - - - - - 0.890 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
40. CCDC117 ENSGALG00000005784 185 0.89 - - - - - - 0.890 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
41. TM2D1 ENSGALG00000020614 764 0.888 - - - - - - 0.888 - - - TM2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24142]
42. Mar-06 Mar-06 1218 0.882 - - - - - - 0.882 - - -
43. CACTIN ENSGALG00000024391 1408 0.881 - - - - - - 0.881 - - - cactin, spliceosome C complex subunit [Source:HGNC Symbol;Acc:HGNC:29938]
44. ADAMTSL1 1479 0.879 - - - - - - 0.879 - - - ADAMTS like 1, transcript variant X3
45. CSNK1A1 495 0.879 - - - - - - 0.879 - - - casein kinase 1 alpha 1, transcript variant X4
46. IMMP2L ENSGALG00000027876 962 0.879 - - - - - - 0.879 - - - inner mitochondrial membrane peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:14598]
47. EPHB1 ENSGALG00000006609 346 0.877 - - - - - - 0.877 - - - EPH receptor B1, transcript variant X2
48. NALCN ENSGALG00000016868 164 0.877 - - - - - - 0.877 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
49. PYGO1 ENSGALG00000004369 527 0.876 - - - - - - 0.876 - - - pygopus family PHD finger 1 [Source:NCBI gene;Acc:415408]
50. NOL8 ENSGALG00000004750 1433 0.875 - - - - - - 0.875 - - - nucleolar protein 8 [Source:HGNC Symbol;Acc:HGNC:23387]
51. DTNBP1 ENSGALG00000012703 539 0.874 - - - - - - 0.874 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
52. FAM47E-STBD1 FAM47E-STBD1 1148 0.874 - - - - - - 0.874 - - -
53. DHX35 ENSGALG00000003658 1090 0.871 - - - - - - 0.871 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
54. KCNK1 ENSGALG00000011005 1643 0.871 - - - - - - 0.871 - - - potassium two pore domain channel subfamily K member 1 [Source:HGNC Symbol;Acc:HGNC:6272]
55. RIMKLB ENSGALG00000040184 281 0.871 - - - - - - 0.871 - - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
56. GABRG2 ENSGALG00000038042 211 0.871 - - - - - - 0.871 - - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
57. SLC5A11 ENSGALG00000005933 28 0.868 - - - - - - 0.868 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
58. VPS37B ENSGALG00000003743 185 0.867 - - - - - - 0.867 - - - VPS37B, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:25754]
59. QARS ENSGALG00000029980 4207 0.867 - - - - - - 0.867 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
60. SHC2 ENSGALG00000001289 2140 0.866 - - - - - - 0.866 - - - SHC (Src homology 2 domain containing) transforming protein 2, transcript variant X2
61. ZFHX4 ENSGALG00000037164 811 0.866 - - - - - - 0.866 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
62. CPE ENSGALG00000027788 153 0.865 - - - - - - 0.865 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
63. BAI3 BAI3 106 0.863 - - - - - - 0.863 - - -
64. CNTN1 ENSGALG00000009523 158 0.861 - - - - - - 0.861 - - - contactin 1 [Source:NCBI gene;Acc:417786]
65. ODZ3 ODZ3 2213 0.859 - - - - - - - - 0.859 -
66. MPP2 ENSGALG00000035580 383 0.855 - - - - - - 0.855 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
67. MN1 ENSGALG00000026119 1808 0.855 - - - - - - 0.855 - - - MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]
68. CREG1 ENSGALG00000040426 1188 0.854 - - - - - - 0.854 - - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
69. MPZL3 ENSGALG00000021271 1857 0.854 - - - - - - 0.854 - - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
70. LOC422106 ENSGALG00000019757 453 0.851 - - - - - - 0.851 - - - uncharacterized LOC422106
71. DEPDC7 ENSGALG00000011681 1181 0.85 - - - - - - 0.850 - - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
72. CKV1.1 CKV1.1 140 0.849 - - - - - - 0.849 - - -
73. OSBPL2 ENSGALG00000005195 94 0.846 - - - - - - 0.846 - - - oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
74. ECHDC1 ENSGALG00000014828 958 0.845 - - - - - - 0.845 - - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
75. DENND1A ENSGALG00000001157 503 0.842 - - - - - - 0.842 - - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
76. DPM2 ENSGALG00000005066 9121 0.84 - - - - - - 0.840 - - - dolichyl-phosphate mannosyltransferase subunit 2, regulatory [Source:NCBI gene;Acc:771539]
77. C26H6ORF89 C26H6ORF89 1826 0.839 - - - - - - 0.839 - - -
78. DVL3 ENSGALG00000008414 38 0.838 - - 0.838 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
79. OSTM1 ENSGALG00000015306 192 0.838 - - - - - - 0.838 - - - osteopetrosis associated transmembrane protein 1 [Source:NCBI gene;Acc:421773]
80. SRSF1 ENSGALG00000005525 4376 0.837 - - - - - - 0.837 - - - serine and arginine rich splicing factor 1 [Source:NCBI gene;Acc:772264]
81. NMT2 ENSGALG00000008791 542 0.836 - - - - - - 0.836 - - - N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]
82. METRN ENSGALG00000035634 1871 0.836 - - - - - - 0.836 - - - meteorin, glial cell differentiation regulator [Source:HGNC Symbol;Acc:HGNC:14151]
83. ENSGALG00000005895 ENSGALG00000005895 889 0.833 - - - - - - 0.833 - - -
84. CKB ENSGALG00000011511 2100 0.833 - - - - - - 0.833 - - - creatine kinase B [Source:NCBI gene;Acc:396248]
85. ENSGALG00000006865 ENSGALG00000006865 307 0.832 - - - - - - 0.832 - - -
86. PLEKHO1 ENSGALG00000037540 1804 0.832 - - - - - - - - 0.832 - pleckstrin homology domain containing O1 [Source:NCBI gene;Acc:426108]
87. RAB21 ENSGALG00000010183 7718 0.831 - - - - - - 0.831 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
88. CREBL2 ENSGALG00000037030 1247 0.827 - - - - - - 0.827 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
89. C3H6ORF154 C3H6ORF154 1078 0.824 - - - - - - 0.824 - - -
90. FAM91A1 ENSGALG00000035478 266 0.824 - - - - - - 0.824 - - - family with sequence similarity 91 member A1 [Source:HGNC Symbol;Acc:HGNC:26306]
91. BRCA1 ENSGALG00000002781 2052 0.823 - - - - - - 0.823 - - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
92. FHIT ENSGALG00000007172 580 0.823 - - - - - - 0.823 - - - fragile histidine triad [Source:NCBI gene;Acc:416071]
93. CHGA ENSGALG00000010820 1028 0.822 - - - - - - 0.822 - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
94. LRRC41 ENSGALG00000010359 709 0.821 - - - - - - 0.821 - - - leucine rich repeat containing 41 [Source:HGNC Symbol;Acc:HGNC:16917]
95. GRM7 ENSGALG00000037841 290 0.821 - - - - - - 0.821 - - - glutamate metabotropic receptor 7 [Source:HGNC Symbol;Acc:HGNC:4599]
96. GPR180 ENSGALG00000016897 1545 0.82 - - - - - - 0.820 - - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
97. PKP1 ENSGALG00000000299 155 0.82 - - - - - - 0.820 - - - plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
98. ENSGALG00000027927 ENSGALG00000027927 654 0.819 - - - - - - 0.819 - - -
99. COL12A1 ENSGALG00000015908 1300 0.817 - - - - - - 0.817 - - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
100. TALPID3 TALPID3 1896 0.815 - - - - - - 0.815 - - -

There are 205 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA