Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNX13

Gene Name Gene ID Reads Annotation
SNX13 ENSGALG00000010840 13 sorting nexin 13 [Source:NCBI gene;Acc:420598]











Genes with expression patterns similar to SNX13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNX13 ENSGALG00000010840 13 5 - - 1.000 1.000 - 1.000 1.000 - - 1.000 sorting nexin 13 [Source:NCBI gene;Acc:420598]
2. POLR3G ENSGALG00000014650 7 1.907 - - - 0.907 - - - - - 1.000 RNA polymerase III subunit G, transcript variant X2
3. TNFRSF9 9 1.865 - - - 0.865 - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
4. HPRTL ENSGALG00000005361 31 1.489 - - - - - - 0.779 - - 0.710 hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
5. CMBL ENSGALG00000013033 3 1 - - - - - - 1.000 - - - carboxymethylenebutenolidase homolog, transcript variant X4
6. WNT7A ENSGALG00000005123 2 1 - - - - - - - - - 1.000 Wnt family member 7A [Source:NCBI gene;Acc:374168]
7. NDEL1 ENSGALG00000001163 16 1 - - - - - - 1.000 - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
8. MST MST 9 1 - - - - - - - - - 1.000
9. CLRN2 ENSGALG00000027453 3 1 - - - - - - 1.000 - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
10. LPAR5 ENSGALG00000014455 10 1 - - - - - - 1.000 - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
11. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
12. OBSL1 ENSGALG00000011242 22 1 - - - - - - 1.000 - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
13. SNORA77 SNORA77 5 1 - - - - - - - - - 1.000
14. NUDT3 ENSGALG00000002830 7 1 - - - - - - - - - 1.000 nudix hydrolase 3 [Source:NCBI gene;Acc:419905]
15. JDP2 ENSGALG00000010322 11 1 - - - - - - 1.000 - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
16. CSMD3 ENSGALG00000031578 23 1 - - - - - - 1.000 - - - CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
17. PCYT1B 190 1 - - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
18. TMTC1 ENSGALG00000012956 160 1 - - - - - - 1.000 - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
19. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
20. RBL2 ENSGALG00000003663 10 1 - - - - - - - - - 1.000 RB transcriptional corepressor like 2 [Source:NCBI gene;Acc:425111]
21. NT5E ENSGALG00000015833 5 1 - - - - - - - - - 1.000 5'-nucleotidase ecto
22. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
23. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
24. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
25. MC5R ENSGALG00000032087 2 1 - - - - - - 1.000 - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
26. LRRN3 ENSGALG00000009488 1 1 - - - - - - - - - 1.000 leucine rich repeat neuronal 3 [Source:HGNC Symbol;Acc:HGNC:17200]
27. DAPK1 ENSGALG00000012608 17 1 - - - - - - - - - 1.000 death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
28. RAB9B ENSGALG00000004918 2 1 - - - - - - - - - 1.000 RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
29. Mar-04 Mar-04 7 1 - - - - - - 1.000 - - -
30. LRFN2 ENSGALG00000010050 28 1 - - - - - - 1.000 - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
31. PKN2 ENSGALG00000006237 37 1 - - - - - - 1.000 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
32. NOG ENSGALG00000003114 12 1 - - - - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
33. GLRA4 ENSGALG00000004936 23 1 - - - - - - 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
34. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
35. gga-mir-22 ENSGALG00000024507 2 1 - - - - - - - - - 1.000 gga-mir-22 [Source:miRBase;Acc:MI0006982]
36. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
37. ENSGALG00000026496 ENSGALG00000026496 9 1 - - - - - - - - - 1.000
38. SUFU ENSGALG00000008096 307 1 - - - - - - 1.000 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
39. IFN-GAMMA IFN-GAMMA 1 1 - - - - - - - - - 1.000
40. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
41. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
42. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
43. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
44. GRAMD2 GRAMD2 3 1 - - - - - - - - - 1.000
45. UBAP1 ENSGALG00000021378 11 1 - - - - - - 1.000 - - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
46. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
47. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
48. EXOC6B ENSGALG00000016098 3 1 - - - - - - - - - 1.000 exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
49. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
50. CAMTA1 ENSGALG00000039525 1 1 - - - - - - - - - 1.000 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:HGNC:18806]
51. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
52. TTC29 ENSGALG00000010009 4 1 - - - - - - - - - 1.000 tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
53. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
54. FZD10 ENSGALG00000042003 11 1 - - - - - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
55. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
56. ACOT1L ENSGALG00000008752 6 1 - - - - - - - - - 1.000 acyl-CoA thioesterase 1-like
57. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
58. RS1 ENSGALG00000016523 11 1 - - - - - - - - - 1.000 retinoschisin 1 [Source:NCBI gene;Acc:772315]
59. RUFY4 2 1 - - - - - - - - - 1.000 RUN and FYVE domain containing 4, transcript variant X5
60. C8B ENSGALG00000010853 21 1 - - - - - - - - - 1.000 Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
61. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - 1.000 - - -
62. MMP9 ENSGALG00000006992 78 1 - - - - - - 1.000 - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
63. ENSGALG00000004619 ENSGALG00000004619 3 1 - - - - - - - - - 1.000
64. TPO ENSGALG00000016370 98 1 - - - - - - 1.000 - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
65. YTHDF3 ENSGALG00000039774 170 1 - - - - - - 1.000 - - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
66. SLC25A22 ENSGALG00000039335 2 1 - - - - - - 1.000 - - - solute carrier family 25 member 22 [Source:NCBI gene;Acc:429678]
67. NUAK1 ENSGALG00000012662 411 1 - - - - - - 1.000 - - - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
68. ESR2 ENSGALG00000011801 7 1 - - - - - - - - - 1.000 estrogen receptor 2 [Source:NCBI gene;Acc:395575]
69. ENSGALG00000006384 ENSGALG00000006384 3 1 - - - - - - 1.000 - - -
70. TRIM36 ENSGALG00000008188 1 1 - - - - - - - - - 1.000 tripartite motif containing 36 [Source:HGNC Symbol;Acc:HGNC:16280]
71. FAM60A FAM60A 109 1 - - - - - - 1.000 - - -
72. ENSGALG00000009487 ENSGALG00000009487 1 1 - - - - - - - - - 1.000
73. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -
74. GAB3 ENSGALG00000008408 19 1 - - - - - - 1.000 - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
75. ENSGALG00000027169 ENSGALG00000027169 2 1 - - - - - - 1.000 - - -
76. ENSGALG00000024286 ENSGALG00000024286 2 1 - - - - - - - - - 1.000
77. FOSL2 ENSGALG00000010036 3 1 - - - - - - - - - 1.000 FOS like 2, AP-1 transcription factor subunit [Source:NCBI gene;Acc:421416]
78. COL25A1 ENSGALG00000039411 5 1 - - - - - - 1.000 - - - collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
79. C6orf58 ENSGALG00000045522 2 1 - - - - - - - - - 1.000 chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
80. CDH6 ENSGALG00000012917 17 0.987 - - - - - - - - - 0.987 cadherin 6 [Source:NCBI gene;Acc:414842]
81. SNORA40 SNORA40 12 0.973 - - - - - - - - - 0.973
82. KLF13 ENSGALG00000026590 13 0.96 - - - - - - - - - 0.960 Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
83. SMYD3 ENSGALG00000010653 14 0.952 - - - - - - - - - 0.952 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
84. EPHA1 ENSGALG00000014687 174 0.952 - - - - - - - - - 0.952 EPH receptor A1 [Source:NCBI gene;Acc:378782]
85. CDH9 ENSGALG00000012923 10 0.951 - - 0.951 - - - - - - - cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
86. FGL2 ENSGALG00000008306 15 0.951 - - 0.951 - - - - - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
87. P2RY13 ENSGALG00000039432 16 0.946 - - - - - - - - - 0.946 purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
88. SH2D4B ENSGALG00000002370 10 0.909 - - - - - - - - - 0.909 SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
89. U12 U12 3 0.909 - - - - - - - - - 0.909
90. PARP12 ENSGALG00000046187 10 0.909 - - - - - - - - - 0.909 poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]
91. ENSGALG00000010002 ENSGALG00000010002 25 0.907 - - - 0.907 - - - - - -
92. PTGES ENSGALG00000038013 77 0.907 - - - 0.907 - - - - - - prostaglandin E synthase [Source:NCBI gene;Acc:417193]
93. TMEM63B ENSGALG00000010282 7 0.907 - - - 0.907 - - - - - - transmembrane protein 63B [Source:HGNC Symbol;Acc:HGNC:17735]
94. KRT20 ENSGALG00000019716 11 0.907 - - - 0.907 - - - - - - keratin 20 [Source:NCBI gene;Acc:420045]
95. CACNG4 ENSGALG00000026091 6 0.907 - - - 0.907 - - - - - - calcium voltage-gated channel auxiliary subunit gamma 4 [Source:NCBI gene;Acc:373924]
96. TSPAN10 ENSGALG00000004525 6 0.907 - - - 0.907 - - - - - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
97. TRPC2L ENSGALG00000017493 28 0.907 - - - 0.907 - - - - - - Putative short transient receptor potential channel 2-like protein
98. EGOT EGOT 2 0.907 - - - 0.907 - - - - - -
99. CHRNA10 ENSGALG00000022702 7 0.907 - - - 0.907 - - - - - - cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
100. FAM122B ENSGALG00000006108 16 0.907 - - - 0.907 - - - - - - family with sequence similarity 122B [Source:HGNC Symbol;Acc:HGNC:30490]

There are 79 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA