Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNRPD3

Gene Name Gene ID Reads Annotation
SNRPD3 ENSGALG00000006596 57314 small nuclear ribonucleoprotein D3 polypeptide [Source:NCBI gene;Acc:416947]











Genes with expression patterns similar to SNRPD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRPD3 ENSGALG00000006596 57314 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein D3 polypeptide [Source:NCBI gene;Acc:416947]
2. IPO7 ENSGALG00000005807 46316 1.485 - - 0.740 - 0.745 - - - - - importin 7 [Source:HGNC Symbol;Acc:HGNC:9852]
3. RNF114 ENSGALG00000008021 6078 1.482 - - 0.739 - - - 0.743 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
4. ENSGALG00000022570 ENSGALG00000022570 90374 1.462 - - - - 0.734 - 0.728 - - -
5. GORAB ENSGALG00000003329 1958 0.861 - - 0.861 - - - - - - - golgin, RAB6 interacting [Source:HGNC Symbol;Acc:HGNC:25676]
6. ATP6V1E1 ENSGALG00000013036 13497 0.852 - - 0.852 - - - - - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
7. SEC22B ENSGALG00000039704 16080 0.845 - - 0.845 - - - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
8. IFT57 ENSGALG00000015356 5540 0.835 - - 0.835 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
9. GDPD4 ENSGALG00000000690 824 0.83 - - 0.830 - - - - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
10. AGFG1 ENSGALG00000003052 4766 0.829 - - 0.829 - - - - - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
11. SOBP ENSGALG00000043047 147 0.828 - - 0.828 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
12. PCYOX1 ENSGALG00000013878 2200 0.828 - - 0.828 - - - - - - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
13. AMBRA1 ENSGALG00000008358 2865 0.828 - - 0.828 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
14. GFER ENSGALG00000005579 1367 0.827 - - 0.827 - - - - - - - growth factor, augmenter of liver regeneration [Source:HGNC Symbol;Acc:HGNC:4236]
15. SHMT1 ENSGALG00000005046 1430 0.825 - - 0.825 - - - - - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
16. TCTN2 ENSGALG00000023683 3596 0.824 - - 0.824 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
17. PEMT ENSGALG00000004875 4094 0.824 - - 0.824 - - - - - - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
18. HYAL3 ENSGALG00000029000 712 0.823 - - 0.823 - - - - - - - hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
19. CHGA ENSGALG00000010820 1028 0.823 - - 0.823 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
20. AKT3 ENSGALG00000034081 866 0.823 - - 0.823 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
21. RPS14 ENSGALG00000004588 268250 0.823 - - - - - - 0.823 - - - ribosomal protein S14 [Source:NCBI gene;Acc:416275]
22. CEP104 ENSGALG00000000978 1130 0.823 - - 0.823 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
23. RAD54L2 ENSGALG00000003243 187 0.822 - - 0.822 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
24. NDUFB1 ENSGALG00000028537 2059 0.821 - - 0.821 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
25. GTF2H2 ENSGALG00000002399 2361 0.821 - - 0.821 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
26. ITM2B ENSGALG00000016996 1112 0.82 - - 0.820 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
27. RPS6KB1 ENSGALG00000005198 169 0.82 - - 0.820 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
28. LRRC71 ENSGALG00000027351 695 0.82 - - 0.820 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
29. IFT81 ENSGALG00000003854 2534 0.819 - - 0.819 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
30. SZT2 ENSGALG00000028561 255 0.819 - - 0.819 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
31. NXPE3 ENSGALG00000015344 111 0.818 - - 0.818 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
32. CTNS ENSGALG00000004628 1358 0.816 - - 0.816 - - - - - - - cystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]
33. PRUNE PRUNE 452 0.816 - - 0.816 - - - - - - -
34. UEVLD ENSGALG00000006342 164 0.816 - - 0.816 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
35. ADK ENSGALG00000005057 199 0.816 - - 0.816 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
36. TLE1 ENSGALG00000012575 2047 0.816 - - 0.816 - - - - - - - transducin like enhancer of split 1 [Source:HGNC Symbol;Acc:HGNC:11837]
37. ENSGALG00000002020 ENSGALG00000002020 183 0.815 - - 0.815 - - - - - - -
38. ENSGALG00000020103 ENSGALG00000020103 64 0.815 - - 0.815 - - - - - - -
39. CDC14B ENSGALG00000012627 110 0.815 - - 0.815 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
40. NUDCD2 ENSGALG00000001726 6303 0.814 - - 0.814 - - - - - - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
41. ABCC3 ENSGALG00000007522 340 0.814 - - 0.814 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
42. PTDSS2 ENSGALG00000004300 682 0.814 - - 0.814 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
43. ENSGALG00000028964 ENSGALG00000028964 46 0.814 - - 0.814 - - - - - - -
44. ITGB4 ENSGALG00000002389 44 0.813 - - 0.813 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
45. TDRD6 48 0.813 - - 0.813 - - - - - - - tudor domain containing 6
46. RQCD1 RQCD1 110 0.813 - - 0.813 - - - - - - -
47. CAMSAP1 ENSGALG00000001692 2617 0.813 - - 0.813 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
48. MRC2 ENSGALG00000000461 48 0.813 - - 0.813 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
49. FAM134C 860 0.812 - - 0.812 - - - - - - - family with sequence similarity 134 member C
50. CDK1 ENSGALG00000003085 56398 0.812 - - 0.812 - - - - - - - cyclin dependent kinase 1 [Source:NCBI gene;Acc:396252]
51. L3MBTL3 ENSGALG00000034030 113 0.812 - - 0.812 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
52. DHFR ENSGALG00000026757 18478 0.812 - - 0.812 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
53. RFK ENSGALG00000033558 1364 0.812 - - 0.812 - - - - - - - riboflavin kinase, transcript variant X3
54. U4 U4 69 0.812 - - 0.812 - - - - - - -
55. ENSGALG00000008689 ENSGALG00000008689 232 0.812 - - 0.812 - - - - - - -
56. CHAMP1 ENSGALG00000016813 508 0.812 - - 0.812 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
57. ENSGALG00000004703 ENSGALG00000004703 112 0.811 - - 0.811 - - - - - - -
58. ATP8B4 ENSGALG00000002326 456 0.811 - - 0.811 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
59. F2R ENSGALG00000014983 106 0.811 - - 0.811 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
60. MED12 ENSGALG00000036322 814 0.81 - - 0.810 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
61. HPS5 ENSGALG00000027716 2466 0.81 - - 0.810 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
62. MLLT3 ENSGALG00000015078 502 0.81 - - 0.810 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
63. CCT5 ENSGALG00000013041 56190 0.81 - - - - - - - 0.810 - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
64. FBXL5 ENSGALG00000014510 245 0.81 - - 0.810 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
65. FAM168B ENSGALG00000002172 12162 0.81 - - 0.810 - - - - - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
66. TTPAL ENSGALG00000004244 2734 0.81 - - 0.810 - - - - - - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
67. LRRC42 ENSGALG00000010743 384 0.81 - - 0.810 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
68. DACH1 ENSGALG00000037015 5648 0.809 - - 0.809 - - - - - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
69. TUBA4A ENSGALG00000000433 1367 0.807 - - 0.807 - - - - - - - tubulin alpha 4a
70. SLC3A1 ENSGALG00000009973 608 0.807 - - 0.807 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
71. KCTD3 ENSGALG00000009678 335 0.807 - - 0.807 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
72. OSGIN2 ENSGALG00000042840 83 0.807 - - 0.807 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
73. AKAP10 ENSGALG00000004679 103 0.807 - - 0.807 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
74. BBS5 ENSGALG00000009846 344 0.806 - - 0.806 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
75. RALGDS ENSGALG00000003412 4478 0.805 - - 0.805 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
76. YBX3 ENSGALG00000031890 819 0.805 - - 0.805 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
77. DBN1 ENSGALG00000033405 216 0.805 - - 0.805 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
78. CLEC16A ENSGALG00000007167 66 0.805 - - 0.805 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
79. SNX14 ENSGALG00000015831 2554 0.803 - - 0.803 - - - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
80. TRIM13 ENSGALG00000017011 92 0.803 - - 0.803 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
81. ABCE1 ENSGALG00000009961 958 0.803 - - 0.803 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
82. RECQL ENSGALG00000013174 1323 0.803 - - 0.803 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
83. HDHD2 ENSGALG00000034801 6373 0.802 - - 0.802 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
84. FBN1 ENSGALG00000004960 2130 0.802 - - 0.802 - - - - - - - fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]
85. RAD1 ENSGALG00000003365 1417 0.801 - - 0.801 - - - - - - - RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
86. OGFOD2 ENSGALG00000003687 1200 0.801 - - 0.801 - - - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25823]
87. PCYT1B 190 0.799 - - 0.799 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
88. POGLUT1 ENSGALG00000015480 12290 0.798 - - 0.798 - - - - - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
89. AKTIP ENSGALG00000033378 1991 0.798 - - 0.798 - - - - - - - AKT interacting protein [Source:NCBI gene;Acc:415720]
90. ATP10D ENSGALG00000014192 94 0.798 - - 0.798 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
91. NACAD 679 0.797 - - 0.797 - - - - - - - NAC alpha domain containing, transcript variant X1
92. BBX ENSGALG00000015353 1281 0.796 - - 0.796 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
93. PICK1 ENSGALG00000041823 3843 0.796 - - 0.796 - - - - - - - protein interacting with PRKCA 1 [Source:HGNC Symbol;Acc:HGNC:9394]
94. APTX ENSGALG00000001954 692 0.796 - - 0.796 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
95. CENPO ENSGALG00000016609 1699 0.796 - - 0.796 - - - - - - - centromere protein O [Source:NCBI gene;Acc:422014]
96. HOXA7 ENSGALG00000026989 6746 0.796 - - 0.796 - - - - - - - homeobox A7 [Source:NCBI gene;Acc:395290]
97. TMEM242 ENSGALG00000013689 377 0.795 - - 0.795 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
98. RRN3 ENSGALG00000041989 3934 0.795 - - 0.795 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
99. RAD18 ENSGALG00000008368 7214 0.794 - - 0.794 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
100. NT5C3B ENSGALG00000003651 5190 0.794 - - 0.794 - - - - - - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]

There are 263 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA