Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNRPD1

Gene Name Gene ID Reads Annotation
SNRPD1 ENSGALG00000041334 219195 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]











Genes with expression patterns similar to SNRPD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRPD1 ENSGALG00000041334 219195 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
2. ISCA1 ENSGALG00000012606 10342 1.685 - - - - 0.716 - 0.969 - - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
3. GNA13 ENSGALG00000036028 9791 1.677 - - - - 0.707 - 0.970 - - - G protein subunit alpha 13 [Source:HGNC Symbol;Acc:HGNC:4381]
4. NUP93 ENSGALG00000003010 16504 1.663 - - - - - - 0.960 - 0.703 - nucleoporin 93 [Source:NCBI gene;Acc:415693]
5. MARCKSL1 ENSGALG00000032335 88728 1.643 - - 0.703 - - - 0.940 - - - MARCKS like 1 [Source:NCBI gene;Acc:770764]
6. NDUFA8 ENSGALG00000040987 49453 1.511 - - - - - - - 0.802 0.709 - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
7. RFC5 ENSGALG00000026517 26113 1.502 - - - - 0.782 - - - 0.720 - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
8. PRKACB ENSGALG00000028530 12506 0.981 - - - - - - 0.981 - - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
9. MYL12A ENSGALG00000014854 63033 0.976 - - - - - - 0.976 - - - myosin, light chain 12A, regulatory, non-sarcomeric [Source:NCBI gene;Acc:396284]
10. NT5DC2 ENSGALG00000035596 27633 0.973 - - - - - - 0.973 - - - 5'-nucleotidase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25717]
11. KIF4A ENSGALG00000004195 25487 0.972 - - - - - - 0.972 - - - kinesin family member 4A [Source:NCBI gene;Acc:395823]
12. PRRC1 ENSGALG00000014703 9962 0.972 - - - - - - 0.972 - - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
13. ERP29 ENSGALG00000023510 47100 0.97 - - - - - - 0.970 - - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]
14. ENSGALG00000022570 ENSGALG00000022570 90374 0.969 - - - - - - 0.969 - - -
15. RAB14 ENSGALG00000001474 12617 0.968 - - - - - - 0.968 - - - RAB14, member RAS oncogene family [Source:NCBI gene;Acc:417119]
16. Sep-02_1 Sep-02_1 19203 0.967 - - - - - - 0.967 - - -
17. MMP2 ENSGALG00000003580 13120 0.967 - - - - - - 0.967 - - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
18. NEDD4L ENSGALG00000034584 5881 0.966 - - - - - - 0.966 - - - neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, transcript variant X6
19. IL17RD ENSGALG00000005499 5844 0.966 - - - - - - 0.966 - - - interleukin 17 receptor D [Source:NCBI gene;Acc:395186]
20. ENSGALG00000003150 ENSGALG00000003150 10001 0.966 - - - - - - 0.966 - - -
21. RNF114 ENSGALG00000008021 6078 0.966 - - - - - - 0.966 - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
22. TTLL5 ENSGALG00000010340 4875 0.966 - - - - - - 0.966 - - - tubulin tyrosine ligase like 5 [Source:NCBI gene;Acc:423367]
23. SNX24 ENSGALG00000018874 4482 0.966 - - - - - - 0.966 - - - sorting nexin 24 [Source:NCBI gene;Acc:426798]
24. SULF1 ENSGALG00000039553 5115 0.966 - - - - - - 0.966 - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
25. PTGR2 ENSGALG00000009269 4991 0.965 - - - - - - 0.965 - - - prostaglandin reductase 2 [Source:NCBI gene;Acc:423244]
26. CCNY ENSGALG00000007076 3921 0.965 - - - - - - 0.965 - - - cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
27. VPS39 ENSGALG00000008991 4018 0.965 - - - - - - 0.965 - - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
28. ING3 ENSGALG00000009023 4961 0.965 - - - - - - 0.965 - - - inhibitor of growth family member 3 [Source:NCBI gene;Acc:417762]
29. WDFY3 10775 0.964 - - - - - - 0.964 - - - WD repeat and FYVE domain containing 3, transcript variant X7
30. PSMD9 ENSGALG00000004352 7284 0.964 - - - - - - 0.964 - - - proteasome 26S subunit, non-ATPase 9 [Source:NCBI gene;Acc:416853]
31. PASK ENSGALG00000006016 3096 0.964 - - - - - - 0.964 - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
32. DGKD ENSGALG00000001730 4456 0.964 - - - - - - 0.964 - - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
33. POLDIP3 ENSGALG00000011863 6424 0.964 - - - - - - 0.964 - - - DNA polymerase delta interacting protein 3 [Source:NCBI gene;Acc:417974]
34. WNT7B ENSGALG00000036255 3343 0.963 - - - - - - 0.963 - - - Wnt family member 7B [Source:NCBI gene;Acc:427937]
35. ARHGEF28 ENSGALG00000014923 2523 0.963 - - - - - - 0.963 - - - Rho guanine nucleotide exchange factor 28 [Source:HGNC Symbol;Acc:HGNC:30322]
36. RPS20 ENSGALG00000014432 209638 0.939 - - - - - - 0.939 - - - ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]
37. SMNDC1 ENSGALG00000008561 14415 0.923 - - - - - - 0.923 - - - survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16900]
38. MSX2 ENSGALG00000038848 6950 0.912 - - - - - - 0.912 - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
39. ALYREF ENSGALG00000007237 48479 0.839 - - - - 0.839 - - - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
40. MCM5 ENSGALG00000012546 18254 0.833 - - - - 0.833 - - - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
41. PSMA2 ENSGALG00000039387 23620 0.831 - - - - - - - 0.831 - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
42. UCHL5 ENSGALG00000002524 28460 0.824 - - - - - - 0.824 - - - ubiquitin C-terminal hydrolase L5 [Source:NCBI gene;Acc:424359]
43. PUS1 ENSGALG00000002354 10153 0.817 - - - - - - 0.817 - - - pseudouridylate synthase 1 [Source:HGNC Symbol;Acc:HGNC:15508]
44. DDRGK1 ENSGALG00000016003 9098 0.815 - - - - - - 0.815 - - - DDRGK domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16110]
45. ACTG1_1 ENSGALG00000001381 64662 0.815 - - - - - - 0.815 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
46. SMARCE1 ENSGALG00000003882 49063 0.81 - - - - 0.810 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
47. PRDX4 ENSGALG00000016357 32208 0.805 - - - - - - - 0.805 - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
48. CKS1B ENSGALG00000028664 42261 0.798 - - 0.798 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
49. PPP1CC ENSGALG00000004571 14748 0.795 - - - - 0.795 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
50. DCPS ENSGALG00000031143 10191 0.788 - - - - 0.788 - - - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
51. DYL1 ENSGALG00000007153 94287 0.787 - - - - 0.787 - - - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
52. AURKAIP1 ENSGALG00000001555 14715 0.786 - - - - 0.786 - - - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
53. MRPL35 ENSGALG00000022950 26070 0.782 - - - - 0.782 - - - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
54. PEBP1 ENSGALG00000007403 77502 0.778 - - 0.778 - - - - - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
55. EIF4A3 ENSGALG00000008530 53964 0.775 - - - - 0.775 - - - - - eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
56. WASF1 ENSGALG00000015066 5628 0.773 - - - - 0.773 - - - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
57. RCC2 ENSGALG00000031684 28067 0.77 - - - - - - - 0.770 - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
58. MYCL ENSGALG00000024047 10367 0.768 - - - - - - - - 0.768 - MYCL proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7555]
59. MAP3K7 ENSGALG00000015596 15164 0.767 - - - - 0.767 - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
60. AIMP2 ENSGALG00000003400 12655 0.767 - - - - - - - 0.767 - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
61. MRPS21 ENSGALG00000000456 35298 0.766 - - - - - - - 0.766 - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
62. MRPS22 ENSGALG00000005367 8307 0.765 - - - - 0.765 - - - - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
63. NUBP1 ENSGALG00000007241 3791 0.763 - - - - 0.763 - - - - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
64. SF3A2 ENSGALG00000021679 12580 0.762 - - - - 0.762 - - - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
65. HEY1 ENSGALG00000035031 8795 0.76 - - - - - - - - 0.760 - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
66. DGCR2 ENSGALG00000005891 8405 0.76 - - - - 0.760 - - - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
67. MRPL44 ENSGALG00000003067 15256 0.758 - - - - 0.758 - - - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
68. MRPS33 ENSGALG00000028879 17966 0.758 - - - - 0.758 - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
69. NUDT1 ENSGALG00000004245 9034 0.757 - - - - 0.757 - - - - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
70. H2AFZ ENSGALG00000014023 117824 0.756 - - - - 0.756 - - - - - H2A histone family, member Z [Source:NCBI gene;Acc:426361]
71. TRAPPC4 ENSGALG00000007707 3568 0.756 - - - - 0.756 - - - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
72. PHPT1 ENSGALG00000039061 17343 0.754 - - - - 0.754 - - - - - phosphohistidine phosphatase 1 [Source:NCBI gene;Acc:770750]
73. RPS27A ENSGALG00000036790 249359 0.754 - - - - - - 0.754 - - - ribosomal protein S27a [Source:NCBI gene;Acc:395796]
74. SMN ENSGALG00000002430 7515 0.753 - - - - 0.753 - - - - - survival of motor neuron [Source:NCBI gene;Acc:374025]
75. ZMAT2 ENSGALG00000041746 23601 0.753 - - - - - - - 0.753 - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
76. NDUFV2 ENSGALG00000036625 29234 0.751 - - - - - - - - 0.751 - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
77. MOSPD1 ENSGALG00000006132 8503 0.751 - - - - 0.751 - - - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
78. HMGN2 HMGN2 158543 0.75 - - - - - - - - 0.750 -
79. MRPL15 ENSGALG00000041086 16820 0.749 - - - - - - - 0.749 - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
80. CRLS1 ENSGALG00000009214 8652 0.747 - - - - - - - 0.747 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
81. MIF ENSGALG00000006326 109683 0.747 - - - - - - - - 0.747 - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
82. TIMM17A ENSGALG00000000086 19205 0.744 - - - - - - - - 0.744 - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
83. STRAP ENSGALG00000013092 13100 0.744 - - - - - - - 0.744 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
84. IDH1 ENSGALG00000008818 17613 0.743 - - - - - - - 0.743 - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
85. RBX1 ENSGALG00000011993 26090 0.742 - - - - 0.742 - - - - - ring-box 1 [Source:NCBI gene;Acc:418001]
86. THAP5 ENSGALG00000009494 6540 0.741 - - - - 0.741 - - - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
87. MRPL55 5995 0.741 - - - - 0.741 - - - - - mitochondrial ribosomal protein L55
88. SOD1 ENSGALG00000015844 35836 0.74 - - - - 0.740 - - - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
89. SAFB2 ENSGALG00000001948 10238 0.739 - - - - 0.739 - - - - - scaffold attachment factor B2, transcript variant X6
90. ENSGALG00000026802 ENSGALG00000026802 14688 0.739 - - - - 0.739 - - - - -
91. SDOS SDOS 66125 0.739 - - - - - - - - 0.739 -
92. UQCRC1 ENSGALG00000005789 23201 0.738 - - - - 0.738 - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
93. UFD1L 12964 0.737 - - - - 0.737 - - - - - ubiquitin fusion degradation 1 like (yeast)
94. ATP6V0B ENSGALG00000010091 14901 0.737 - - - - 0.737 - - - - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
95. LAMTOR2 ENSGALG00000029881 35356 0.737 - - 0.737 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
96. EIF4E2 ENSGALG00000007919 8163 0.737 - - - - - - - - 0.737 - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
97. RPL13 ENSGALG00000006179 345032 0.736 0.736 - - - - - - - - - ribosomal protein L13 [Source:NCBI gene;Acc:395849]
98. RPLP0 ENSGALG00000023294 519985 0.736 - - - - - - - - - 0.736 ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
99. CDC20 ENSGALG00000009971 11197 0.735 - - - - - - - - 0.735 - cell division cycle 20 [Source:NCBI gene;Acc:424563]
100. CHD7 ENSGALG00000041080 10201 0.735 - - - - - - - - 0.735 - chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]

There are 59 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA