Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNRPB2

Gene Name Gene ID Reads Annotation
SNRPB2 28675 small nuclear ribonucleoprotein polypeptide B2











Genes with expression patterns similar to SNRPB2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRPB2 28675 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide B2
2. ZDHHC6 ENSGALG00000008870 16575 0.955 - - - - - - 0.955 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
3. MRPS26 ENSGALG00000014118 27422 0.953 - - - - - - 0.953 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
4. PELI1 ENSGALG00000008837 11561 0.948 - - - - - - 0.948 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
5. MRPS34 ENSGALG00000001792 14262 0.945 - - - - - - 0.945 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
6. RPS25 ENSGALG00000007699 156127 0.944 - - - - - - 0.944 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
7. PRDX1 ENSGALG00000010243 151918 0.941 - - - - - - 0.941 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
8. CCT5 ENSGALG00000013041 56190 0.94 - - - - - - 0.940 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
9. TBL1X ENSGALG00000040006 28597 0.939 - - - - - - 0.939 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
10. BUB3 ENSGALG00000009681 36055 0.939 - - - - - - 0.939 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
11. POLB ENSGALG00000040828 7462 0.936 - - - - - - 0.936 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
12. ENSGALG00000013825 ENSGALG00000013825 16473 0.931 - - - - - - 0.931 - - -
13. HDLBP ENSGALG00000005823 24636 0.93 - - - - - - 0.930 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
14. WLS ENSGALG00000011238 20969 0.93 - - - - - - 0.930 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
15. RNF13 ENSGALG00000010411 8749 0.93 - - - - - - 0.930 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
16. TRA2A ENSGALG00000010973 37101 0.929 - - - - - - 0.929 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
17. ACTR6 ENSGALG00000040976 31271 0.929 - - - - - - 0.929 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
18. NOB1 ENSGALG00000000693 15442 0.929 - - - - - - 0.929 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
19. SPINT1 ENSGALG00000008469 5735 0.927 - - - - - - 0.927 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
20. RPF1 ENSGALG00000008796 9809 0.926 - - - - - - 0.926 - - - ribosome production factor 1 homolog
21. ABRACL ENSGALG00000013826 19445 0.924 - - - - - - 0.924 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
22. MRPS36 ENSGALG00000014789 7584 0.923 - - - - - - 0.923 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
23. CTNNBL1 ENSGALG00000006817 6765 0.922 - - - - - - 0.922 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
24. CNBP 42704 0.922 - - - - - - 0.922 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
25. CDC5L ENSGALG00000016704 22893 0.919 - - - - - - 0.919 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
26. TP53INP1 ENSGALG00000041353 6890 0.918 - - - - - - 0.918 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
27. CCAR1 ENSGALG00000004108 13219 0.918 - - - - - - 0.918 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
28. APITD1 APITD1 11830 0.917 - - - - - - 0.917 - - -
29. MRPS15 ENSGALG00000044433 15356 0.915 - - - - - - 0.915 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
30. MOB4 ENSGALG00000008128 10322 0.915 - - - - - - 0.915 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
31. ARGLU1 ENSGALG00000016855 25633 0.914 - - - - - - 0.914 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
32. PPP3CB ENSGALG00000005243 8794 0.911 - - - - - - 0.911 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
33. POLR2C ENSGALG00000001168 10703 0.911 - - - - - - 0.911 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
34. ENSGALG00000000360 ENSGALG00000000360 15320 0.91 - - - - - - 0.910 - - -
35. MMADHC ENSGALG00000012473 9026 0.91 - - - - - - 0.910 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
36. FGD5 ENSGALG00000008546 4031 0.91 - - - - - - 0.910 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
37. USO1 ENSGALG00000010878 9506 0.908 - - - - - - 0.908 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
38. MYBL2 ENSGALG00000003503 15875 0.907 - - - - - - 0.907 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
39. SERBP1 ENSGALG00000011229 30489 0.907 - - - - - - 0.907 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
40. COMMD8 ENSGALG00000026279 13509 0.907 - - - - - - 0.907 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
41. EPHA3 ENSGALG00000015403 9811 0.907 - - - - - - 0.907 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
42. ANLN 10479 0.906 - - - - - - 0.906 - - - anillin actin binding protein, transcript variant X2
43. FHL3 ENSGALG00000035187 9753 0.904 - - - - - - 0.904 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
44. LOC424109 ENSGALG00000008738 3932 0.903 - - - - - - 0.903 - - - alpha-aspartyl dipeptidase
45. GALNTL4 GALNTL4 3548 0.902 - - - - - - 0.902 - - -
46. TTF1 4214 0.9 - - - - - - 0.900 - - - transcription termination factor 1
47. GDPD4 ENSGALG00000000690 824 0.899 - - - - - - 0.899 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
48. C6H10ORF32 C6H10ORF32 7694 0.899 - - - - - - 0.899 - - -
49. CCDC90B ENSGALG00000037072 5088 0.899 - - - - - - 0.899 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
50. GLT8D1 ENSGALG00000001642 4232 0.898 - - - - - - 0.898 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
51. GCAT ENSGALG00000012312 7906 0.898 - - - - - - 0.898 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
52. PRKG1 ENSGALG00000003805 4654 0.898 - - - - - - 0.898 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
53. GSDMA ENSGALG00000013495 1650 0.898 - - - - - - 0.898 - - - gasdermin A [Source:NCBI gene;Acc:426132]
54. ENSGALG00000006730 ENSGALG00000006730 3695 0.897 - - - - - - 0.897 - - -
55. EXOSC7 ENSGALG00000030084 8654 0.897 - - - - - - 0.897 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
56. DIS3 ENSGALG00000016930 3696 0.896 - - - - - - 0.896 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
57. gga-mir-1723 ENSGALG00000025386 6662 0.895 - - - - - - 0.895 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
58. UBE2N ENSGALG00000030515 32059 0.894 - - - - - - 0.894 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
59. BRIX1 ENSGALG00000003373 27878 0.893 - - - - - - 0.893 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
60. TPI1 ENSGALG00000014526 43273 0.893 - - - - - - 0.893 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
61. SH3RF3 ENSGALG00000016810 2169 0.893 - - - - - - 0.893 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
62. ZNF276 ENSGALG00000000513 2410 0.89 - - - - - - 0.890 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
63. HNRNPU ENSGALG00000010671 56560 0.889 - - - - - - 0.889 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
64. ATPAF2 ENSGALG00000004926 3393 0.889 - - - - - - 0.889 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
65. SNAPIN ENSGALG00000026796 11155 0.888 - - - - - - 0.888 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
66. PSMD13 ENSGALG00000043684 14720 0.888 - - - - - - 0.888 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
67. LOC425795 ENSGALG00000027696 2357 0.888 - - - - - - 0.888 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
68. CHL1 ENSGALG00000037856 1565 0.887 - - - - - - 0.887 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
69. SAV1 ENSGALG00000012341 3313 0.887 - - - - - - 0.887 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
70. CRAC1A CRAC1A 5265 0.886 - - - - - - 0.886 - - -
71. DNAJC10 ENSGALG00000008862 3114 0.886 - - - - - - 0.886 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
72. ST13 ENSGALG00000012007 25670 0.886 - - - - - - 0.886 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
73. RPUSD4 ENSGALG00000024326 3788 0.885 - - - - - - 0.885 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
74. LYVE1 ENSGALG00000005643 1230 0.885 - - - - - - 0.885 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
75. CSDE1 ENSGALG00000002139 1683 0.884 - - - - - - 0.884 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
76. LUZP2 ENSGALG00000030151 585 0.884 - - - - - - 0.884 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
77. MAPT ENSGALG00000000625 659 0.883 - - - - - - 0.883 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
78. LHFPL2 ENSGALG00000004437 500 0.883 - - - - - - 0.883 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
79. EZH2 ENSGALG00000043399 15881 0.875 - - - - - - 0.875 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
80. DDX18 ENSGALG00000012147 12463 0.874 - - - - - - 0.874 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
81. STAG2 ENSGALG00000008482 13629 0.867 - - - - - - 0.867 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
82. CKAP4 ENSGALG00000012659 36398 0.866 - - - - - - 0.866 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
83. LOC407092 ENSGALG00000013809 10706 0.864 - - - - - - 0.864 - - - AD012Z, transcript variant X5
84. SNX17 ENSGALG00000032468 13519 0.863 - - - - - - 0.863 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
85. TRIB2 ENSGALG00000016457 17641 0.862 - - - - - - 0.862 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
86. VDAC3 ENSGALG00000041463 21595 0.857 - - - - - - 0.857 - - - voltage dependent anion channel 3, transcript variant X9
87. MED1 ENSGALG00000001708 9556 0.852 - - - - - - 0.852 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
88. TAF12 ENSGALG00000000991 8709 0.846 - - - - - - 0.846 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
89. CHPKCI CHPKCI 36217 0.83 - - - - - - 0.830 - - -
90. PRDX4 ENSGALG00000016357 32208 0.788 - - - - - - 0.788 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
91. NDUFA11 ENSGALG00000021692 75804 0.784 - - - - - - 0.784 - - - NADH:ubiquinone oxidoreductase subunit A11
92. SEC61G ENSGALG00000037863 83362 0.77 - - - - - - 0.770 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
93. TMEM18 ENSGALG00000028744 11779 0.749 - - - - - - - 0.749 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
94. TFAM ENSGALG00000002703 19330 0.747 - - - - - - - 0.747 - - transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
95. SAAL1 ENSGALG00000026111 8340 0.743 - - - - - - 0.743 - - - serum amyloid A like 1
96. HBE 329974 0.742 - - - - - - 0.742 - - - hemoglobin subunit epsilon
97. CDC27 ENSGALG00000000596 12014 0.727 - - - - - - 0.727 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
98. SCP2 ENSGALG00000010652 19563 0.727 - - - - - - - - 0.727 - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
99. RPL29 ENSGALG00000026978 271790 0.711 - - - - - - 0.711 - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
100. RPLP2 ENSGALG00000034811 152607 0.709 - - - - 0.709 - - - - - ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA