Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNRPA1

Gene Name Gene ID Reads Annotation
SNRPA1 ENSGALG00000007170 17764 small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]











Genes with expression patterns similar to SNRPA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRPA1 ENSGALG00000007170 17764 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein polypeptide A' [Source:NCBI gene;Acc:415523]
2. SIRT6 ENSGALG00000001245 3716 1.64 - - - - - - 0.700 0.940 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
3. MRPL37 ENSGALG00000010761 10596 1.595 - - - - - - 0.744 0.851 - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
4. RPLP0 ENSGALG00000023294 519985 1.483 0.759 0.724 - - - - - - - - ribosomal protein lateral stalk subunit P0 [Source:NCBI gene;Acc:395835]
5. LRRC59 ENSGALG00000007673 2081 0.973 - - - - - - - 0.973 - - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
6. BEND5 ENSGALG00000010505 3298 0.966 - - - - - - - 0.966 - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
7. MRPL32 ENSGALG00000037258 6861 0.961 - - - - - - - 0.961 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
8. TNNI1 ENSGALG00000000313 4069 0.95 - - - - - - - 0.950 - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
9. CNPY3 ENSGALG00000028471 1413 0.949 - - - - - - - 0.949 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
10. ARHGEF18 ENSGALG00000003572 224 0.949 - - - - - - - 0.949 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
11. SYNM ENSGALG00000007048 705 0.949 - - - - - - - 0.949 - - synemin [Source:NCBI gene;Acc:395599]
12. FAXDC2 ENSGALG00000003972 172 0.949 - - - - - - - 0.949 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
13. ENSGALG00000006278 ENSGALG00000006278 202 0.949 - - - - - - - 0.949 - -
14. KIF1A ENSGALG00000006221 1989 0.949 - - - - - - - 0.949 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
15. EFR3B ENSGALG00000016605 234 0.949 - - - - - - - 0.949 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
16. TMEM200C ENSGALG00000030210 1434 0.948 - - - - - - - 0.948 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
17. CCDC15 1759 0.948 - - - - - - - 0.948 - - coiled-coil domain containing 15
18. RAC2 ENSGALG00000012456 987 0.948 - - - - - - - 0.948 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
19. FSBP 3152 0.947 - - - - - - - 0.947 - - fibrinogen silencer binding protein
20. KCNK2 ENSGALG00000009687 1552 0.947 - - - - - - - 0.947 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
21. ADAMTS6 ENSGALG00000014751 1293 0.947 - - - - - - - 0.947 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
22. MIEN1 ENSGALG00000026328 3396 0.946 - - - - - - - 0.946 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
23. RAD52 ENSGALG00000039171 6989 0.945 - - - - - - - 0.945 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
24. RAB20 ENSGALG00000016844 3250 0.945 - - - - - - - 0.945 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
25. NEO1 ENSGALG00000001774 10165 0.945 - - - - - - - 0.945 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
26. PRDM6 ENSGALG00000005351 2078 0.945 - - - - - - - 0.945 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
27. DIMT1 ENSGALG00000020569 5150 0.945 - - - - - - - 0.945 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
28. EVPL ENSGALG00000002108 591 0.944 - - - - - - - 0.944 - - envoplakin
29. PIGB ENSGALG00000037734 2193 0.943 - - - - - - - 0.943 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
30. ENSGALG00000002852 ENSGALG00000002852 2687 0.943 - - - - - - - 0.943 - -
31. TEX10 ENSGALG00000013438 3121 0.941 - - - - - - - 0.941 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
32. SFXN1 ENSGALG00000033956 2713 0.941 - - - - - - - 0.941 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
33. EIF3I ENSGALG00000003337 28832 0.938 - - - - - - - 0.938 - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
34. TMEM26 ENSGALG00000025862 2222 0.938 - - - - - - - 0.938 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
35. ATP11B ENSGALG00000008839 3455 0.938 - - - - - - - 0.938 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
36. HPS4 ENSGALG00000005595 2217 0.936 - - - - - - - 0.936 - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
37. DEPDC1B ENSGALG00000014729 5334 0.936 - - - - - - - 0.936 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
38. ZCCHC10 ENSGALG00000036666 5148 0.935 - - - - - - - 0.935 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
39. SULF1 ENSGALG00000039553 5115 0.935 - - - - - - - 0.935 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
40. DCK ENSGALG00000028501 8675 0.935 - - - - - - - 0.935 - - deoxycytidine kinase [Source:NCBI gene;Acc:422648]
41. TM9SF2L ENSGALG00000006487 5566 0.934 - - - - - - - 0.934 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
42. TMEM60 ENSGALG00000008330 6303 0.934 - - - - - - - 0.934 - - transmembrane protein 60 [Source:NCBI gene;Acc:417727]
43. YIPF1 5945 0.932 - - - - - - - 0.932 - - Yip1 domain family member 1, transcript variant 4
44. MTFR2 ENSGALG00000019967 4436 0.932 - - - - - - - 0.932 - - mitochondrial fission regulator 2, transcript variant X1
45. DAB2 ENSGALG00000003803 6143 0.932 - - - - - - - 0.932 - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
46. AVENAII AVENAII 4552 0.93 - - - - - - - 0.930 - -
47. IVD ENSGALG00000040267 5820 0.93 - - - - - - - 0.930 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
48. NKIRAS2 ENSGALG00000028971 3414 0.929 - - - - - - - 0.929 - - NFKB inhibitor interacting Ras like 2 [Source:NCBI gene;Acc:420032]
49. BLCAP ENSGALG00000027126 12200 0.929 - - - - - - - 0.929 - - BLCAP, apoptosis inducing factor [Source:NCBI gene;Acc:100857695]
50. MYO9A ENSGALG00000033618 4505 0.927 - - - - - - - 0.927 - - myosin IXA, transcript variant X10
51. CDKAL1 ENSGALG00000012677 4733 0.926 - - - - - - - 0.926 - - CDK5 regulatory subunit associated protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:21050]
52. ACVR2B ENSGALG00000006158 8692 0.923 - - - - - - - 0.923 - - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
53. SPR ENSGALG00000000067 3456 0.92 - - - - - - - 0.920 - - sepiapterin reductase [Source:HGNC Symbol;Acc:HGNC:11257]
54. COPS8 ENSGALG00000033385 10166 0.919 - - - - - - - 0.919 - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
55. C17H9ORF16 C17H9ORF16 7908 0.918 - - - - - - - 0.918 - -
56. TTC37 ENSGALG00000014670 5715 0.918 - - - - - - - 0.918 - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
57. GNL2 ENSGALG00000001973 10148 0.912 - - - - - - - 0.912 - - G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]
58. STX2 ENSGALG00000002536 10438 0.908 - - - - - - - 0.908 - - syntaxin 2 [Source:NCBI gene;Acc:378895]
59. MCFD2 ENSGALG00000010017 8905 0.905 - - - - - - - 0.905 - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
60. KLHL18 ENSGALG00000005582 3053 0.903 - - - - - - - 0.903 - - kelch like family member 18 [Source:NCBI gene;Acc:420406]
61. AP5Z1 ENSGALG00000040528 4302 0.9 - - - - - - - 0.900 - - adaptor related protein complex 5 subunit zeta 1 [Source:HGNC Symbol;Acc:HGNC:22197]
62. GATC ENSGALG00000007195 8610 0.899 - - - - - - - 0.899 - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
63. PREP ENSGALG00000015405 17050 0.898 - - - - - - - 0.898 - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
64. CCDC104 CCDC104 6584 0.898 - - - - - - - 0.898 - -
65. YIPF3 ENSGALG00000041037 6126 0.897 - - - - - - - 0.897 - - Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
66. NDUFB4 ENSGALG00000027688 8951 0.891 - - - - - - - 0.891 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:HGNC Symbol;Acc:HGNC:7699]
67. CCDC58 ENSGALG00000014413 9022 0.889 - - - - - - - 0.889 - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
68. MAGT1 ENSGALG00000007861 9105 0.873 - - - - - - - 0.873 - - magnesium transporter 1 [Source:NCBI gene;Acc:422332]
69. C C 7669 0.871 - - - - - - - 0.871 - -
70. RAB11A ENSGALG00000007615 9154 0.87 - - - - - - - 0.870 - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
71. MRPL42 ENSGALG00000011293 15145 0.856 - - - - - - - 0.856 - - mitochondrial ribosomal protein L42 [Source:HGNC Symbol;Acc:HGNC:14493]
72. SNORA72 SNORA72 27695 0.855 - - - - - - - 0.855 - -
73. TP53BP2 ENSGALG00000042816 12368 0.853 - - - - - - - 0.853 - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
74. PDCD10 ENSGALG00000009477 7061 0.852 - - - - - - - 0.852 - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
75. TSPAN13 ENSGALG00000027240 8999 0.849 - - - - - - - 0.849 - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
76. CORO1C ENSGALG00000004901 7055 0.837 - - - - - - - 0.837 - - coronin 1C [Source:NCBI gene;Acc:416893]
77. GGT1 ENSGALG00000006565 690 0.837 - - - - - - - 0.837 - - gamma-glutamyltransferase 1, transcript variant X11
78. GRPEL1 ENSGALG00000015549 11246 0.835 - - - - - - - 0.835 - - GrpE like 1, mitochondrial [Source:NCBI gene;Acc:422865]
79. ACVR1 ENSGALG00000037301 6448 0.835 - - - - - - - 0.835 - - activin A receptor type 1 [Source:NCBI gene;Acc:395246]
80. HMBS ENSGALG00000042939 13360 0.826 - - - - - - - 0.826 - - hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
81. EPHA3 ENSGALG00000015403 9811 0.826 - - - - - - - 0.826 - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
82. AP3S2 ENSGALG00000008291 7574 0.822 - - - - - - 0.822 - - - adaptor related protein complex 3 sigma 2 subunit [Source:NCBI gene;Acc:415581]
83. ATG5 ENSGALG00000015387 7752 0.822 - - - - - - 0.822 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
84. RBM15B 5416 0.818 - - - - - - - 0.818 - - RNA binding motif protein 15B
85. PRRC1 ENSGALG00000014703 9962 0.811 - - - - - - - 0.811 - - proline rich coiled-coil 1 [Source:NCBI gene;Acc:427127]
86. KIAA0020 KIAA0020 14353 0.809 - - - - - - - 0.809 - -
87. KIF3A ENSGALG00000006860 6209 0.808 - - - - - - - 0.808 - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
88. RNF220 ENSGALG00000010109 3114 0.808 - - - - - - - 0.808 - - ring finger protein 220 [Source:NCBI gene;Acc:424580]
89. PRRC2C 3925 0.807 - - - - - - - 0.807 - - proline rich coiled-coil 2C, transcript variant X17
90. ZNHIT3 ENSGALG00000026031 8652 0.805 - - - - - - - 0.805 - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
91. CDK9 ENSGALG00000035576 3659 0.802 - - - - - - - 0.802 - - cyclin dependent kinase 9 [Source:NCBI gene;Acc:417226]
92. TMEM167A ENSGALG00000027332 13862 0.802 - - - - - - - 0.802 - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
93. ENSGALG00000020995 ENSGALG00000020995 2144 0.797 - - - - - - 0.797 - - -
94. SPEN ENSGALG00000036932 9688 0.797 - - - - - - - 0.797 - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
95. MANF ENSGALG00000002362 7518 0.796 - - - - - - 0.796 - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
96. FBXW11 ENSGALG00000002229 5805 0.795 - - - - - - - 0.795 - - F-box and WD repeat domain containing 11 [Source:NCBI gene;Acc:416181]
97. CHMP1B ENSGALG00000040746 4031 0.792 - - - - - - 0.792 - - - charged multivesicular body protein 1B [Source:NCBI gene;Acc:422143]
98. ACBD3 ENSGALG00000009246 8405 0.79 - - - - - - - 0.790 - - acyl-CoA binding domain containing 3 [Source:NCBI gene;Acc:421317]
99. MRPL40 ENSGALG00000001587 20893 0.79 - - - - - - - 0.790 - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
100. MED28 ENSGALG00000007138 7686 0.789 - - - - - - 0.789 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA