Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNRNP48

Gene Name Gene ID Reads Annotation
SNRNP48 ENSGALG00000013005 1468 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]











Genes with expression patterns similar to SNRNP48

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRNP48 ENSGALG00000013005 1468 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
2. C14orf80 C14orf80 1921 2.569 - - - - - - 0.877 0.760 - 0.932
3. FANCB ENSGALG00000016569 1193 2.27 - - 0.723 - - - - - 0.824 0.723 FA complementation group B [Source:NCBI gene;Acc:418628]
4. BRD1 ENSGALG00000029379 6047 1.831 - - - - - - 0.908 - - 0.923 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
5. NCAPG2 ENSGALG00000006525 2319 1.821 - - - - - - 0.882 - - 0.939 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
6. WDSUB1 ENSGALG00000012574 2038 1.8 - - - - - - 0.874 - - 0.926 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
7. CCNE2 ENSGALG00000040794 1229 1.774 - - - - - - 0.883 - - 0.891 cyclin E2 [Source:NCBI gene;Acc:420231]
8. CRYM ENSGALG00000002484 3558 1.764 - - - - - - - - 0.838 0.926 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
9. GTF3C1 ENSGALG00000007387 5788 1.742 - - - - - - - - 0.826 0.916 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
10. PCLO 249 1.716 - - - - - - - - 0.786 0.930 piccolo presynaptic cytomatrix protein
11. FASTKD3 ENSGALG00000033521 1186 1.701 - - - - - - - - 0.766 0.935 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
12. FAM193A ENSGALG00000015667 3075 1.679 - - - - - - 0.926 - - 0.753 family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
13. MPRIP ENSGALG00000004798 6700 1.672 - - - - - - 0.755 - - 0.917 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
14. HELLS ENSGALG00000005451 7094 1.664 - - - - - - 0.866 - - 0.798 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
15. MTSS1 ENSGALG00000041969 1312 1.66 - - - - - - - - 0.718 0.942 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
16. VWF ENSGALG00000017272 1012 1.635 - - - - - - - - 0.749 0.886 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
17. FSTL4 ENSGALG00000031487 529 1.634 - - - - - - - - 0.721 0.913 follistatin like 4 [Source:NCBI gene;Acc:395163]
18. CRCP ENSGALG00000002587 8809 1.624 - - - - - 0.702 - - - 0.922 CGRP receptor component [Source:NCBI gene;Acc:396022]
19. RBBP8 ENSGALG00000014982 3255 1.623 - - - - - - - - 0.785 0.838 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
20. TOP3B ENSGALG00000030051 5953 1.605 - - - - - - 0.835 - - 0.770 DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
21. CCNK ENSGALG00000011138 6416 1.602 - - - - - - 0.760 - - 0.842 cyclin K [Source:NCBI gene;Acc:423446]
22. HSPA12A ENSGALG00000009248 7783 1.602 - - - - - - - - 0.703 0.899 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
23. NSG1 ENSGALG00000015010 5829 1.6 - - - - - - 0.863 0.737 - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
24. CPSF2 ENSGALG00000010783 5236 1.594 - - - - - - 0.716 - - 0.878 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
25. MXRA5 ENSGALG00000016635 352 1.594 - - - - - 0.721 0.873 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
26. MBNL2 ENSGALG00000016890 3162 1.592 - - - - - - 0.883 - - 0.709 muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
27. CDC73 ENSGALG00000002469 4586 1.591 - - - - - - 0.812 - - 0.779 cell division cycle 73 [Source:NCBI gene;Acc:424356]
28. CEP290 ENSGALG00000011177 1559 1.588 - - - - - 0.723 0.865 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
29. PCMT1 ENSGALG00000012388 7778 1.586 - - - - - - - - 0.823 0.763 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
30. ALMS1 ENSGALG00000044620 570 1.581 - - - - - - - - 0.789 0.792 ALMS1, centrosome and basal body associated protein, transcript variant X1
31. GGA.8379 GGA.8379 4419 1.576 - - - - - - 0.799 - - 0.777
32. ZC3H11A ENSGALG00000000541 2712 1.561 - - - - - - - - 0.736 0.825 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
33. ENSGALG00000014171 ENSGALG00000014171 10383 1.56 - - - - - - - - 0.752 0.808
34. PWP1 ENSGALG00000012631 10536 1.56 - - - - - - - 0.711 - 0.849 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
35. ATP6V0A1 ENSGALG00000003256 4408 1.557 - - - - - - - - 0.755 0.802 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
36. SYNGR2 ENSGALG00000027902 6953 1.553 - - - - - - 0.753 - - 0.800 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
37. NAA30 ENSGALG00000012098 4681 1.553 - - - - - 0.733 - - - 0.820 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
38. URM1 ENSGALG00000004971 17880 1.528 - - - - - - 0.785 - - 0.743 ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
39. ENSGALG00000005870 ENSGALG00000005870 4343 1.525 - - - - - - 0.791 0.734 - -
40. RBM19 ENSGALG00000008289 10702 1.524 - - - - - - 0.790 - - 0.734 RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
41. SMDT1 ENSGALG00000011897 9360 1.523 - - - - - - - - 0.761 0.762 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
42. SNAI1 ENSGALG00000008018 3930 1.522 - - - - - - - - 0.738 0.784 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
43. HSF2 ENSGALG00000038420 5259 1.505 - - - - - - 0.803 0.702 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
44. RASGEF1B 2014 1.504 - - - - - 0.716 0.788 - - - RasGEF domain family member 1B, transcript variant X8
45. COPS2 ENSGALG00000000404 8980 1.5 - - - - - - 0.764 - - 0.736 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
46. LRP12 ENSGALG00000033630 2534 1.496 - - - - - - 0.777 - 0.719 - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
47. PTCH1 ENSGALG00000012620 4840 1.491 - - - - - - - - 0.704 0.787 patched 1 [Source:NCBI gene;Acc:395806]
48. NAP1L1 ENSGALG00000010238 14506 1.475 - - - - - - 0.736 - - 0.739 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
49. GPBP1 ENSGALG00000014724 5454 1.465 - - - - - 0.718 - - - 0.747 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
50. HISTH1 ENSGALG00000011747 16825 1.42 - - - - - 0.718 0.702 - - - histone H1
51. MSANTD4 ENSGALG00000017177 3306 1.416 - - - - - - - 0.707 0.709 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]
52. LONP2 ENSGALG00000003942 3380 1.414 - - - - - - - 0.707 0.707 - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
53. KCNMA1 ENSGALG00000004980 261 0.962 - - - - - - - - - 0.962 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
54. PPFIA1 ENSGALG00000035774 5258 0.959 - - - - - - - - - 0.959 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
55. MYOCD ENSGALG00000001021 351 0.957 - - - - - - - - - 0.957 myocardin [Source:NCBI gene;Acc:427790]
56. ODZ3 ODZ3 2213 0.953 - - - - - - - - - 0.953
57. ACADL ENSGALG00000002891 8058 0.953 - - - - - - - - - 0.953 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
58. CCDC88A ENSGALG00000043587 2208 0.949 - - - - - - - - - 0.949 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
59. LAMP2 ENSGALG00000008572 198 0.948 - - - - - - - - - 0.948 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
60. AGGF1 ENSGALG00000004311 3011 0.946 - - - - - - - - - 0.946 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
61. HDHD1 HDHD1 2928 0.944 - - - - - - - - - 0.944
62. COG5 ENSGALG00000042764 4205 0.943 - - - - - - - - - 0.943 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
63. CABLES1 ENSGALG00000014998 1636 0.942 - - - - - - - - - 0.942 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
64. MIER1 ENSGALG00000011118 1418 0.941 - - - - - - - - - 0.941 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
65. DIAPH3 ENSGALG00000016937 1069 0.94 - - - - - - - - - 0.940 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
66. SPDL1 ENSGALG00000001942 4403 0.94 - - - - - - - - - 0.940 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
67. RWDD2B ENSGALG00000015807 3601 0.94 - - - - - - - - - 0.940 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
68. KLHL7 ENSGALG00000010938 528 0.939 - - - - - - - - - 0.939 kelch like family member 7 [Source:NCBI gene;Acc:420612]
69. SSR2 ENSGALG00000000764 32190 0.939 - - - - - - - - - 0.939 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
70. MPP5 ENSGALG00000009581 724 0.939 - - - - - - - - - 0.939 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
71. ENSGALG00000003515 ENSGALG00000003515 1003 0.939 - - - - - - - - - 0.939
72. ARHGAP21 ENSGALG00000007721 3961 0.938 - - - - - - - - - 0.938 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
73. ZNF106 ENSGALG00000009081 1520 0.937 - - - - - - - - - 0.937 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
74. MB21D1 2460 0.936 - - - - - - - - - 0.936 Mab-21 domain containing 1
75. C26H6ORF89 C26H6ORF89 1826 0.936 - - - - - - - - - 0.936
76. CSTF3 ENSGALG00000011685 4711 0.936 - - - - - - 0.936 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
77. CXADR ENSGALG00000015701 96 0.935 - - - - - - - - - 0.935 coxsackie virus and adenovirus receptor, transcript variant X2
78. PROM1 ENSGALG00000014496 2494 0.935 - - - - - - - - - 0.935 prominin 1 [Source:NCBI gene;Acc:422825]
79. PRR14L ENSGALG00000028473 439 0.935 - - - - - - - - - 0.935 proline rich 14-like, transcript variant X5
80. ZNF6 ZNF6 138 0.935 - - - - - - - - - 0.935
81. TBC1D19 ENSGALG00000029673 1868 0.934 - - - - - - - - - 0.934 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
82. 5S_2 5S_2 58 0.934 - - - - - - - - - 0.934
83. ITGA9 ENSGALG00000029378 415 0.934 - - - - - - - - - 0.934 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
84. HAUS8 ENSGALG00000003727 351 0.933 - - - - - - - - - 0.933 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
85. IL10R2 IL10R2 72 0.933 - - - - - - - - - 0.933
86. CPNE2 ENSGALG00000001316 236 0.933 - - - - - - - - - 0.933 copine 2 [Source:NCBI gene;Acc:415646]
87. GSTAL2 ENSGALG00000028551 4899 0.932 - - - - - - - - - 0.932 glutathione S-transferase alpha-like 2, transcript variant X4
88. PM20D2 ENSGALG00000015779 1301 0.932 - - - - - - - - - 0.932 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
89. FAM190B FAM190B 165 0.932 - - - - - - - - - 0.932
90. ERCC6 ENSGALG00000006254 3452 0.932 - - - - - - - - - 0.932 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
91. GRK4 ENSGALG00000015645 1065 0.932 - - - - - - - - - 0.932 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
92. PTX3 ENSGALG00000028284 2984 0.931 - - - - - - - - - 0.931 pentraxin 3 [Source:NCBI gene;Acc:548626]
93. POLR1B ENSGALG00000032273 3845 0.931 - - - - - - - - - 0.931 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
94. AURKA ENSGALG00000007768 793 0.931 - - - - - - - - - 0.931 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
95. SOX6 ENSGALG00000006074 102 0.931 - - - - - - - - - 0.931 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
96. MRPS31 ENSGALG00000017033 9287 0.93 - - - - - - - - - 0.930 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
97. CDKN2AIP ENSGALG00000010661 1218 0.93 - - - - - - - - - 0.930 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
98. RHOT1 ENSGALG00000003397 5149 0.93 - - - - - - - - - 0.930 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
99. ETFDH ENSGALG00000009442 7671 0.929 - - - - - - - - - 0.929 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
100. SSH1 ENSGALG00000004928 222 0.929 - - - - - - - - - 0.929 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]

There are 853 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA