Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNRNP40

Gene Name Gene ID Reads Annotation
SNRNP40 ENSGALG00000000615 32298 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]











Genes with expression patterns similar to SNRNP40

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRNP40 ENSGALG00000000615 32298 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
2. SFPQ ENSGALG00000002514 66832 2.329 - - 0.769 - - - 0.797 - - 0.763 splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
3. CIAPIN1 ENSGALG00000029268 23036 2.246 - - - - - - 0.736 0.703 - 0.807 cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
4. SDHD ENSGALG00000007878 25129 1.685 - - - - - - 0.899 0.786 - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
5. SMC4 ENSGALG00000009553 15715 1.681 - - - - - - 0.926 - - 0.755 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
6. PTP4A2 ENSGALG00000003265 24826 1.678 - - - - - - 0.851 - - 0.827 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
7. NEO1 ENSGALG00000001774 10165 1.674 - - - - - - 0.868 - - 0.806 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
8. SIKE1 ENSGALG00000002147 20836 1.654 - - - - - - 0.841 0.813 - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
9. DCAF7 ENSGALG00000000510 8681 1.653 - - - - - - 0.872 0.781 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
10. MRPL50 ENSGALG00000015543 11649 1.644 - - - - - - 0.897 - - 0.747 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
11. DNAJC19 ENSGALG00000008852 6093 1.632 - - - - - - 0.729 0.903 - - DnaJ heat shock protein family (Hsp40) member C19 [Source:HGNC Symbol;Acc:HGNC:30528]
12. WASF1 ENSGALG00000015066 5628 1.619 - - - - - - 0.809 - - 0.810 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
13. NOC4L ENSGALG00000002272 9644 1.599 - - - - - - 0.850 - - 0.749 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
14. COMMD7 ENSGALG00000006630 11491 1.594 - - - - - - 0.846 0.748 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
15. TMEM115 ENSGALG00000026965 13050 1.588 - - - - - - 0.813 - - 0.775 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
16. UBE2E3 ENSGALG00000020793 9517 1.585 - - - - - - 0.764 - - 0.821 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
17. NUPL1 NUPL1 8197 1.579 - - - - - - 0.836 0.743 - -
18. COX5A ENSGALG00000014121 55281 1.575 - - - - - - 0.846 - - 0.729 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
19. PCNP ENSGALG00000015330 15750 1.573 - - - - - - 0.794 - - 0.779 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
20. UCHL3 ENSGALG00000016921 16208 1.572 - - - - - - 0.862 - - 0.710 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
21. MRPL28 ENSGALG00000007473 19134 1.562 - - - - - - 0.820 - - 0.742 mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
22. GXYLT1 ENSGALG00000009532 5682 1.558 - - - - - - 0.850 - - 0.708 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
23. ST5 6869 1.556 - - - - - - 0.798 0.758 - - suppression of tumorigenicity 5, transcript variant X1
24. DHX38 ENSGALG00000000787 6913 1.543 - - - - - - 0.812 - - 0.731 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
25. GORASP1 ENSGALG00000006033 4033 1.542 - - - - - - 0.807 - - 0.735 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
26. QDPR ENSGALG00000030070 6953 1.535 - - - - - - 0.796 - - 0.739 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
27. CIB1 ENSGALG00000008302 13946 1.532 - - - - - - 0.828 - - 0.704 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
28. GALNT1 ENSGALG00000013135 13583 1.531 - - - - - - 0.762 0.769 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
29. CLIC4 ENSGALG00000001262 11497 1.529 - - - - - - 0.786 - - 0.743 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
30. DGCR2 ENSGALG00000005891 8405 1.529 - - - - - - 0.828 - - 0.701 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
31. NAA30 ENSGALG00000012098 4681 1.52 - - - - - - 0.781 - - 0.739 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
32. AGPS ENSGALG00000009236 2250 1.515 - - - - - - 0.762 - - 0.753 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
33. ARHGAP21 ENSGALG00000007721 3961 1.507 - - - - - - 0.766 - - 0.741 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
34. RNF219 ENSGALG00000016911 4458 1.506 - - - - - - 0.755 - - 0.751 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
35. ODF2 ENSGALG00000004767 3972 1.502 - - - - - - 0.755 - - 0.747 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
36. PPFIA1 ENSGALG00000035774 5258 1.501 - - - - - - 0.767 - - 0.734 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
37. SSRP1 ENSGALG00000007520 18849 1.497 - - 0.738 - - - 0.759 - - - structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
38. ABL ABL 9532 1.496 - - - - - - 0.722 0.774 - -
39. NABP1 ENSGALG00000025884 4195 1.496 - - - - - - 0.734 0.762 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
40. NDUFS7 ENSGALG00000009703 19674 1.494 - - - - - - 0.786 0.708 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
41. POLR1B ENSGALG00000032273 3845 1.492 - - - - - - 0.720 - - 0.772 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
42. WFDC1 ENSGALG00000005503 6152 1.491 - - - - - - 0.758 - - 0.733 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
43. NDUFAF2 ENSGALG00000027564 7302 1.489 - - - - - - 0.744 0.745 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
44. ACO2 ENSGALG00000011950 30387 1.482 - - - - - - 0.732 - - 0.750 aconitase 2 [Source:NCBI gene;Acc:374009]
45. DYRK2 ENSGALG00000009901 3141 1.482 - - - - - - 0.761 0.721 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
46. GPR162 ENSGALG00000022926 7181 1.481 - - - - - - 0.774 - - 0.707 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
47. WDR53 ENSGALG00000006395 4938 1.479 - - - - - - 0.713 - - 0.766 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
48. RPA3 ENSGALG00000010700 6212 1.478 - - - - - - 0.712 - - 0.766 replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
49. CUTC ENSGALG00000037283 2530 1.476 - - - - - - 0.744 0.732 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
50. GSTAL2 ENSGALG00000028551 4899 1.47 - - - - - - 0.764 - - 0.706 glutathione S-transferase alpha-like 2, transcript variant X4
51. GTF2F2 ENSGALG00000016974 7524 1.468 - - - - - - 0.727 - - 0.741 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
52. DTWD2 ENSGALG00000002250 1604 1.468 - - - - - - 0.750 - - 0.718 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
53. PDZD11 ENSGALG00000004198 11484 1.468 - - - - - - 0.701 0.767 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
54. ZNF639 ENSGALG00000005944 6387 1.467 - - - - - - 0.734 0.733 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
55. SPDL1 ENSGALG00000001942 4403 1.466 - - - - - - 0.741 - - 0.725 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
56. HCFC2 ENSGALG00000029616 4525 1.463 - - - - - - 0.709 0.754 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
57. SDAD1 ENSGALG00000011543 5191 1.463 - - - - - - 0.709 0.754 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
58. HAPLN1 ENSGALG00000015627 14942 1.462 - - - - - - 0.720 0.742 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
59. ANP32B ENSGALG00000037483 190705 1.45 - - 0.710 - - 0.740 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
60. MB21D1 2460 1.432 - - - - - - 0.717 - - 0.715 Mab-21 domain containing 1
61. UTP23 ENSGALG00000032400 3601 1.427 - - - - - - 0.717 - - 0.710 UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
62. FGFR2 ENSGALG00000009495 15391 1.424 - - - - - - 0.723 0.701 - - fibroblast growth factor receptor 2 [Source:NCBI gene;Acc:396259]
63. MCTS1 ENSGALG00000008517 27514 0.94 - - - - - - 0.940 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
64. SF3A2 ENSGALG00000021679 12580 0.929 - - - - - - 0.929 - - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
65. EIF4A2 ENSGALG00000008684 58507 0.927 - - - - - - 0.927 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
66. CASP3 ENSGALG00000010638 11572 0.927 - - - - - - 0.927 - - - caspase 3 [Source:NCBI gene;Acc:395476]
67. GLRX3 ENSGALG00000010464 22578 0.922 - - - - - - 0.922 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
68. SSR3 ENSGALG00000028683 24334 0.918 - - - - - - 0.918 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
69. NDUFAB1 ENSGALG00000006073 40467 0.912 - - - - - - 0.912 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
70. SRRM1 ENSGALG00000001283 23820 0.909 - - - - - - 0.909 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
71. YWHAZ ENSGALG00000031387 84985 0.909 - - - - - - 0.909 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
72. MRPL54 ENSGALG00000027611 39450 0.906 - - - - - - 0.906 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
73. ENSGALG00000017396 ENSGALG00000017396 9028 0.899 - - - - - - 0.899 - - -
74. PSMB7 ENSGALG00000001103 42683 0.899 - - - - - - 0.899 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
75. SKAP2 ENSGALG00000030081 13746 0.898 - - - - - - 0.898 - - - src kinase associated phosphoprotein 2 [Source:HGNC Symbol;Acc:HGNC:15687]
76. TFDP1 ENSGALG00000016823 17019 0.894 - - - - - - 0.894 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
77. ID1 ENSGALG00000034661 44524 0.893 - - - - - - 0.893 - - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
78. HSPA4 ENSGALG00000040882 20966 0.893 - - - - - - 0.893 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
79. SPCS3 ENSGALG00000010839 19106 0.892 - - - - - - 0.892 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
80. MRPL35 ENSGALG00000022950 26070 0.891 - - - - - - - 0.891 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
81. RANBP1 ENSGALG00000002107 17715 0.891 - - - - - - 0.891 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
82. APIP ENSGALG00000031286 6838 0.89 - - - - - - 0.890 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
83. MED17 ENSGALG00000017218 5821 0.89 - - - - - - 0.890 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
84. DERL1 ENSGALG00000033950 15074 0.889 - - - - - - 0.889 - - - derlin 1 [Source:NCBI gene;Acc:420350]
85. RUVBL1 ENSGALG00000005931 9379 0.888 - - - - - - 0.888 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
86. TFB2M ENSGALG00000010651 4374 0.887 - - - - - - 0.887 - - - transcription factor B2, mitochondrial
87. TXNDC17 ENSGALG00000027950 45004 0.885 - - - - - - 0.885 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
88. NDUFA12 ENSGALG00000011325 19807 0.885 - - - - - - 0.885 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
89. HMGB2 ENSGALG00000010745 89235 0.885 - - - - - - 0.885 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
90. BRP44 BRP44 17093 0.884 - - - - - - 0.884 - - -
91. C11H16ORF80 C11H16ORF80 18673 0.884 - - - - - - 0.884 - - -
92. PSMD3 ENSGALG00000033162 25615 0.883 - - - - - - 0.883 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
93. PSMB2 ENSGALG00000026421 51885 0.882 - - - - - - 0.882 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
94. ENY2 ENSGALG00000036618 30314 0.878 - - - - - - 0.878 - - - ENY2, transcription and export complex 2 subunit [Source:NCBI gene;Acc:420275]
95. DCPS ENSGALG00000031143 10191 0.877 - - - - - - 0.877 - - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
96. KDELR2 ENSGALG00000040793 29669 0.877 - - - - - - 0.877 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
97. RBBP4 ENSGALG00000003522 72455 0.877 - - - - - - 0.877 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
98. CRLS1 ENSGALG00000009214 8652 0.876 - - - - - - 0.876 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
99. RPS3A ENSGALG00000010077 292185 0.876 - - - - - - 0.876 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
100. FKBP12 FKBP12 64317 0.876 - - - - - - 0.876 - - -

There are 1223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA