Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNRNP27

Gene Name Gene ID Reads Annotation
SNRNP27 ENSGALG00000013883 22212 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]











Genes with expression patterns similar to SNRNP27

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNRNP27 ENSGALG00000013883 22212 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
2. API5 ENSGALG00000037968 18265 1.509 - - - - - - 0.757 0.752 - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
3. TFDP1 ENSGALG00000016823 17019 0.91 - - - - - - 0.910 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
4. R3HDM1 ENSGALG00000012246 6580 0.904 - - - - - - 0.904 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
5. RSL1D1 ENSGALG00000033690 13638 0.902 - - - - - - 0.902 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
6. SRPR SRPR 21067 0.898 - - - - - - - 0.898 - -
7. PTTG1 17936 0.89 - - - - - - 0.890 - - - pituitary tumor-transforming 1, transcript variant X1
8. PPP2R5D ENSGALG00000040005 6804 0.889 - - - - - - 0.889 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
9. NDUFC2 ENSGALG00000029172 26136 0.885 - - - - - - 0.885 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
10. EIF3B ENSGALG00000040999 49971 0.883 - - - - - - 0.883 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
11. KLHDC4 ENSGALG00000037315 9828 0.883 - - - - - - 0.883 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
12. NCDN ENSGALG00000002408 6180 0.88 - - - - - - 0.880 - - - neurochondrin [Source:NCBI gene;Acc:419633]
13. SDHD ENSGALG00000007878 25129 0.879 - - - - - - 0.879 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
14. MRPL40 ENSGALG00000001587 20893 0.878 - - - - - - 0.878 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
15. NUPL1 NUPL1 8197 0.877 - - - - - - 0.877 - - -
16. RUVBL1 ENSGALG00000005931 9379 0.876 - - - - - - 0.876 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
17. CLNS1A ENSGALG00000008574 25675 0.875 - - - - - - 0.875 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
18. MRPL50 ENSGALG00000015543 11649 0.873 - - - - - - 0.873 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
19. XRN2 ENSGALG00000008372 22164 0.872 - - - - - - 0.872 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
20. CDC40 ENSGALG00000015061 6118 0.872 - - - - - - 0.872 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
21. TMEM167A ENSGALG00000027332 13862 0.872 - - - - - - 0.872 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
22. LLPH ENSGALG00000019358 20976 0.871 - - - - - - 0.871 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
23. GLRX3 ENSGALG00000010464 22578 0.87 - - - - - - 0.870 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
24. DCAF7 ENSGALG00000000510 8681 0.868 - - - - - - 0.868 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
25. CDC23 ENSGALG00000007610 11945 0.868 - - - - - - 0.868 - - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
26. C11H16ORF80 C11H16ORF80 18673 0.867 - - - - - - 0.867 - - -
27. SMC4 ENSGALG00000009553 15715 0.867 - - - - - - 0.867 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
28. HSPA4 ENSGALG00000040882 20966 0.866 - - - - - - 0.866 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
29. GABARAPL2 ENSGALG00000003208 9195 0.866 - - - - - - 0.866 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
30. RTCB ENSGALG00000012611 14360 0.866 - - - - - - 0.866 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
31. TTYH2 ENSGALG00000026940 15628 0.866 - - - - - - 0.866 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
32. ENSGALG00000017396 ENSGALG00000017396 9028 0.865 - - - - - - 0.865 - - -
33. CHTF8 ENSGALG00000000632 7230 0.865 - - - - - - 0.865 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
34. OCIAD1 ENSGALG00000014081 12065 0.863 - - - - - - 0.863 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
35. PPP1R2 ENSGALG00000029789 11594 0.863 - - - - - - 0.863 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
36. TFB2M ENSGALG00000010651 4374 0.863 - - - - - - 0.863 - - - transcription factor B2, mitochondrial
37. SIVA1 ENSGALG00000011619 15130 0.862 - - - - - - 0.862 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
38. DLD ENSGALG00000007931 11011 0.861 - - - - - - 0.861 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
39. SNRNP40 ENSGALG00000000615 32298 0.86 - - - - - - 0.860 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
40. UTP11L UTP11L 11927 0.859 - - - - - - 0.859 - - -
41. AP1B1 ENSGALG00000042213 4828 0.858 - - - - - - 0.858 - - - adaptor related protein complex 1 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:554]
42. LIMD2 ENSGALG00000000529 30617 0.858 - - - - - - 0.858 - - - LIM domain containing 2 [Source:NCBI gene;Acc:419955]
43. PSMB2 ENSGALG00000026421 51885 0.858 - - - - - - 0.858 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
44. IGF2BP2 ENSGALG00000033195 11421 0.857 - - - - - - 0.857 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
45. XRCC5 ENSGALG00000011492 6802 0.856 - - - - - - 0.856 - - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
46. RABGGTB ENSGALG00000011388 11654 0.856 - - - - - - 0.856 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
47. CLN8 ENSGALG00000039606 4209 0.856 - - - - - - 0.856 - - - CLN8, transmembrane ER and ERGIC protein [Source:NCBI gene;Acc:421902]
48. CYC CYC 8740 0.856 - - - - - - 0.856 - - -
49. FAM98A ENSGALG00000010428 9585 0.855 - - - - - - 0.855 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
50. PES1 ENSGALG00000007778 12248 0.855 - - - - - - 0.855 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
51. KIAA0020 KIAA0020 14353 0.855 - - - - - - 0.855 - - -
52. C1QBP ENSGALG00000001654 34814 0.855 - - - - - - 0.855 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
53. INCENP ENSGALG00000007537 16617 0.854 - - - - - - 0.854 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
54. VBP1 VBP1 14482 0.854 - - - - - - 0.854 - - -
55. LAPTM4A ENSGALG00000016479 15973 0.853 - - - - - - 0.853 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
56. PAXIP1 ENSGALG00000036064 3120 0.853 - - - - - - 0.853 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
57. ST5 6869 0.853 - - - - - - 0.853 - - - suppression of tumorigenicity 5, transcript variant X1
58. CCNH ENSGALG00000015641 8051 0.852 - - - - - - 0.852 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
59. ADSL ENSGALG00000012034 10280 0.852 - - - - - - 0.852 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
60. C17H9ORF16 C17H9ORF16 7908 0.852 - - - - - - 0.852 - - -
61. NDUFV2 ENSGALG00000036625 29234 0.851 - - - - - - 0.851 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
62. FXR1 ENSGALG00000008864 10250 0.851 - - - - - - 0.851 - - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
63. GPC4 ENSGALG00000006080 56498 0.85 - - - - - - 0.850 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
64. EXOSC10 ENSGALG00000003086 3223 0.849 - - - - - - 0.849 - - - exosome component 10 [Source:NCBI gene;Acc:419454]
65. KLHL21 ENSGALG00000035211 6145 0.849 - - - - - - 0.849 - - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
66. MRPL54 ENSGALG00000027611 39450 0.849 - - - - - - 0.849 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
67. YWHAZ ENSGALG00000031387 84985 0.848 - - - - - - 0.848 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
68. PREP ENSGALG00000015405 17050 0.848 - - - - - - 0.848 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
69. TXNDC17 ENSGALG00000027950 45004 0.848 - - - - - - 0.848 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
70. RRP1B ENSGALG00000035696 12309 0.847 - - - - - - 0.847 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
71. RRP36 ENSGALG00000028056 7560 0.847 - - - - - - 0.847 - - - ribosomal RNA processing 36
72. PTGFRN ENSGALG00000015464 14584 0.847 - - - - - - 0.847 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
73. ZNHIT3 ENSGALG00000026031 8652 0.847 - - - - - - 0.847 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
74. UPF2 ENSGALG00000033772 9548 0.846 - - - - - - 0.846 - - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
75. NASP ENSGALG00000010255 28423 0.845 - - - - - - 0.845 - - - nuclear autoantigenic sperm protein, transcript variant X3
76. TRRAP ENSGALG00000003596 6032 0.845 - - - - - - 0.845 - - - transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
77. TOR1AIP1 ENSGALG00000029238 5843 0.844 - - - - - - 0.844 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
78. DAD1 ENSGALG00000035626 32604 0.844 - - - - - - 0.844 - - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
79. HARS ENSGALG00000035080 11602 0.844 - - - - - - 0.844 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
80. TXNL1 ENSGALG00000033862 13899 0.843 - - - - - - 0.843 - - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
81. GGA.31975 GGA.31975 8825 0.843 - - - - - - 0.843 - - -
82. WDR51B WDR51B 5757 0.842 - - - - - - 0.842 - - -
83. NUP85 ENSGALG00000007974 21249 0.842 - - - - - - 0.842 - - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
84. DCUN1D1 ENSGALG00000008807 6545 0.841 - - - - - - 0.841 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
85. MCTS1 ENSGALG00000008517 27514 0.841 - - - - - - 0.841 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
86. TERF2 ENSGALG00000000657 7865 0.841 - - - - - - 0.841 - - - telomeric repeat binding factor 2 [Source:NCBI gene;Acc:395598]
87. WDR43 ENSGALG00000032529 12235 0.841 - - - - - - 0.841 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
88. TAF3 ENSGALG00000006731 15569 0.84 - - - - - - 0.840 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
89. DKC1 ENSGALG00000005054 30350 0.84 - - - - - - 0.840 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
90. MADH2 MADH2 13017 0.84 - - - - - - 0.840 - - -
91. MRPL47 ENSGALG00000013759 9044 0.84 - - - - - - 0.840 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
92. BIRC6 ENSGALG00000010541 7999 0.839 - - - - - - 0.839 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
93. MPPED1 ENSGALG00000014186 5726 0.839 - - - - - - 0.839 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
94. C12ORF57 C12ORF57 25906 0.838 - - - - - - 0.838 - - -
95. DHX38 ENSGALG00000000787 6913 0.838 - - - - - - 0.838 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
96. AKAP1 ENSGALG00000005575 12051 0.838 - - - - - - 0.838 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
97. HMGB2 ENSGALG00000010745 89235 0.837 - - - - - - 0.837 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
98. BMS1 ENSGALG00000002624 8339 0.837 - - - - - - 0.837 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
99. RAB11A ENSGALG00000007615 9154 0.836 - - - - - - 0.836 - - - RAB11A, member RAS oncogene family [Source:NCBI gene;Acc:415544]
100. LSM5 ENSGALG00000041625 22307 0.836 - - - - - - 0.836 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]

There are 769 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA