Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNORD58

Gene Name Gene ID Reads Annotation
SNORD58 SNORD58 128











Genes with expression patterns similar to SNORD58

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNORD58 SNORD58 128 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000
2. AQR ENSGALG00000009838 1203 0.851 - - - - - - 0.851 - - - aquarius intron-binding spliceosomal factor [Source:HGNC Symbol;Acc:HGNC:29513]
3. WNT5B ENSGALG00000012998 35 0.849 - - - - - - - 0.849 - - Wnt family member 5B [Source:NCBI gene;Acc:418154]
4. ST3GAL3 ENSGALG00000010083 935 0.848 - - - - - - - 0.848 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:NCBI gene;Acc:424572]
5. CP ENSGALG00000030773 119 0.839 - - - - - - - 0.839 - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
6. ZDHHC16 ENSGALG00000007592 19 0.834 - - - - - - - - - 0.834 zinc finger DHHC-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20714]
7. ENSGALG00000014545 ENSGALG00000014545 285 0.814 - - - - - - - 0.814 - -
8. AMT ENSGALG00000025844 4465 0.813 - - - - - - - 0.813 - - aminomethyltransferase [Source:NCBI gene;Acc:395566]
9. LOC420992 ENSGALG00000013430 126 0.804 - - - - - - - - - 0.804 LOC420992, transcript variant X6
10. VPS26B ENSGALG00000001521 1222 0.801 - - - - - - - 0.801 - - VPS26, retromer complex component B [Source:HGNC Symbol;Acc:HGNC:28119]
11. ENSGALG00000027373 ENSGALG00000027373 2129 0.796 - - - - - 0.796 - - - -
12. SAMSN1 ENSGALG00000040926 88 0.791 - - - - - - - 0.791 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
13. KMT2A ENSGALG00000006818 1225 0.79 - - - - - - 0.790 - - - lysine methyltransferase 2A, transcript variant X5
14. PHTF2 ENSGALG00000008335 722 0.779 - - - - - - 0.779 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
15. SACM1L ENSGALG00000040902 70 0.779 - - - - - - - 0.779 - - SAC1 like phosphatidylinositide phosphatase [Source:HGNC Symbol;Acc:HGNC:17059]
16. ARHGAP31 ENSGALG00000015077 19 0.776 - - - - - - - - - 0.776 Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
17. TNIP2 ENSGALG00000015666 28 0.775 - - - - - - - - - 0.775 TNFAIP3 interacting protein 2 [Source:NCBI gene;Acc:422884]
18. CHL1 ENSGALG00000037856 1565 0.773 - - - - - 0.773 - - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
19. MGEA5 116 0.773 - - - - - - - 0.773 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X1
20. TBC1D8B ENSGALG00000009040 75 0.772 - - - - - - - - - 0.772 TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
21. ENSGALG00000018733 ENSGALG00000018733 175 0.771 - - - - - - - - - 0.771
22. PTPRZ1 ENSGALG00000040114 3410 0.769 - - - - - 0.769 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
23. TPP1 52 0.768 - - - - - - - - - 0.768 tripeptidyl peptidase 1
24. MEAF6 ENSGALG00000002013 2208 0.767 - - - - - - 0.767 - - - MYST/Esa1 associated factor 6 [Source:NCBI gene;Acc:419617]
25. METTL24 ENSGALG00000041120 60 0.766 - - - - - - - - - 0.766 methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
26. EPC1 ENSGALG00000007169 101 0.763 - - - - - - - 0.763 - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
27. TIRAP ENSGALG00000040224 2578 0.762 - - - - - - - 0.762 - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
28. ANKRD26 ENSGALG00000009104 71 0.76 - - - - - - - 0.760 - - ankyrin repeat domain 26 [Source:NCBI gene;Acc:417764]
29. TMEM206 ENSGALG00000009822 80 0.758 - - - - - - - - - 0.758 transmembrane protein 206 [Source:HGNC Symbol;Acc:HGNC:25593]
30. WDR72 ENSGALG00000004545 5 0.757 - - - - - - - - - 0.757 WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
31. PRDM12 ENSGALG00000003895 35 0.756 - - - - - 0.756 - - - - PR/SET domain 12 [Source:HGNC Symbol;Acc:HGNC:13997]
32. GBP1 ENSGALG00000000720 55 0.755 - - - - - - - 0.755 - - guanylate binding protein 1
33. SLC35D3 ENSGALG00000030545 55 0.755 - - - - - - - - - 0.755 solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
34. ENSGALG00000016213 ENSGALG00000016213 33 0.754 - - - - - - - - - 0.754
35. HOXD11 ENSGALG00000039629 658 0.754 - - - - - - - - - 0.754 homeobox D11 [Source:NCBI gene;Acc:395328]
36. AGO2 ENSGALG00000040957 25 0.754 - - - - - - - - - 0.754 argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
37. SLC6A2 ENSGALG00000003560 108 0.754 - - - - - - - 0.754 - - solute carrier family 6 member 2 [Source:NCBI gene;Acc:395458]
38. ATP6V0E1 10 0.754 - - - - - - - - - 0.754 ATPase H+ transporting V0 subunit e1
39. CYP2H1 CYP2H1 363 0.754 - - - - - - - - - 0.754
40. RAB30 ENSGALG00000017248 359 0.754 - - - - - - 0.754 - - - RAB30, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9770]
41. LCAT ENSGALG00000028928 484 0.754 - - - - - - - - - 0.754 lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
42. ENSGALG00000026657 ENSGALG00000026657 4 0.754 - - - - - - - - - 0.754
43. PPM1H ENSGALG00000009805 3 0.754 - - - - - - - - - 0.754 protein phosphatase, Mg2+/Mn2+ dependent 1H [Source:HGNC Symbol;Acc:HGNC:18583]
44. RPUSD2 ENSGALG00000041216 9 0.754 - - - - - - - - - 0.754 RNA pseudouridylate synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
45. CCDC73 ENSGALG00000012103 17 0.751 - - - - - - - 0.751 - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
46. ZAR1 ENSGALG00000035565 141 0.749 - - - - - - - 0.749 - - zygote arrest 1 [Source:HGNC Symbol;Acc:HGNC:20436]
47. FAM195A 4642 0.748 - - - - - - 0.748 - - - family with sequence similarity 195, member A
48. SLK ENSGALG00000008318 2220 0.748 - - - - - - 0.748 - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
49. KYNU ENSGALG00000012418 353 0.746 - - - - - - - - - 0.746 kynureninase, transcript variant X3
50. LOC112532477 ENSGALG00000027520 40 0.746 - - - - - - - - - 0.746 fibrinogen-like protein 1-like protein
51. NHP2 ENSGALG00000033666 17253 0.746 - - - - - - - 0.746 - - NHP2 ribonucleoprotein [Source:NCBI gene;Acc:416218]
52. ADORA2B ENSGALG00000014182 26 0.746 - - - - - - - - - 0.746 adenosine A2b receptor [Source:NCBI gene;Acc:395971]
53. HTR2C ENSGALG00000005853 90 0.746 - - - - - - 0.746 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
54. DLX3 ENSGALG00000040529 37 0.744 - - - - - - - - - 0.744 Gallus gallus distal-less homeobox 3 (DLX3), mRNA. [Source:RefSeq mRNA;Acc:NM_204804]
55. HMGXB3 ENSGALG00000005770 119 0.743 - - - - - - - 0.743 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
56. VRK2 ENSGALG00000032770 117 0.74 - - - - - - - - - 0.740 vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
57. ATP11A ENSGALG00000041644 74 0.74 - - - - - - - 0.740 - - ATPase phospholipid transporting 11A [Source:HGNC Symbol;Acc:HGNC:13552]
58. SLC12A8 ENSGALG00000012045 39 0.739 - - - - - - - - - 0.739 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
59. CNST ENSGALG00000010649 18 0.738 - - - - - - - - - 0.738 consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
60. BTG2 ENSGALG00000026858 6716 0.737 - - - - - - 0.737 - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
61. ENSGALG00000018499 ENSGALG00000018499 100 0.735 - - - - - - - 0.735 - -
62. UBE3C ENSGALG00000006461 57 0.735 - - - - - - - 0.735 - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
63. TAGAP ENSGALG00000013747 34 0.735 - - - - - - - 0.735 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
64. DHX58 ENSGALG00000023821 15 0.735 - - - - - - - 0.735 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
65. KLF11 ENSGALG00000016440 65 0.735 - - - - - - - 0.735 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
66. CPB1 ENSGALG00000006834 25 0.735 - - - - - - - 0.735 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
67. PDXK ENSGALG00000016205 26 0.735 - - - - - - - 0.735 - - pyridoxal kinase [Source:NCBI gene;Acc:418549]
68. C11H16ORF70 C11H16ORF70 7 0.735 - - - - - - - - - 0.735
69. WDR41 ENSGALG00000004350 16 0.734 - - - - - - - - - 0.734 WD repeat domain 41 [Source:HGNC Symbol;Acc:HGNC:25601]
70. GDPD4 ENSGALG00000000690 824 0.734 - - - - - 0.734 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
71. AGRP ENSGALG00000002244 27 0.732 - - - - - - - - - 0.732 agouti related neuropeptide [Source:NCBI gene;Acc:427535]
72. ALKBH4 ENSGALG00000001844 364 0.731 - - - - - - 0.731 - - - alkB homolog 4, lysine demethylase [Source:HGNC Symbol;Acc:HGNC:21900]
73. JAKMIP1 ENSGALG00000015528 11 0.731 - - - - - - - - - 0.731 janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
74. EGLN3 ENSGALG00000010001 32 0.73 - - - - - - - 0.730 - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
75. ENTPD7 ENSGALG00000023691 46 0.73 - - - - - - - - - 0.730 ectonucleoside triphosphate diphosphohydrolase 7 [Source:HGNC Symbol;Acc:HGNC:19745]
76. NEIL3 ENSGALG00000010719 47 0.73 - - - - - - - - - 0.730 nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]
77. SMG7 ENSGALG00000004667 707 0.729 - - - - - - - - - 0.729 SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
78. gga-mir-454 ENSGALG00000033526 22 0.729 - - - - - - - 0.729 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
79. TMEM214 ENSGALG00000022850 7943 0.729 - - - - - - 0.729 - - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
80. IRF-4 IRF-4 19 0.728 - - - - - - - 0.728 - -
81. GHDC ENSGALG00000003333 178 0.727 - - - - - - 0.727 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
82. SOX10 ENSGALG00000012290 3942 0.727 - - - - - 0.727 - - - - SRY-box 10 [Source:NCBI gene;Acc:395573]
83. CSRP3 ENSGALG00000004044 456 0.727 - - - - - 0.727 - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
84. UROC1 ENSGALG00000006306 75 0.724 - - - - - - - - - 0.724 urocanate hydratase 1 [Source:HGNC Symbol;Acc:HGNC:26444]
85. ST6GALNAC3 ENSGALG00000009027 17 0.724 - - - - - - - - - 0.724 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
86. LRRC42 ENSGALG00000010743 384 0.722 - - - - - - 0.722 - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
87. TMSB10 TMSB10 518 0.721 - - - - - 0.721 - - - -
88. PIGF ENSGALG00000020057 201 0.721 - - - - - - - 0.721 - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
89. ITGB1BP2 ENSGALG00000005493 628 0.72 - - - - - - - 0.720 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
90. PIK3CB ENSGALG00000005505 338 0.719 - - - - - - - 0.719 - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta [Source:NCBI gene;Acc:424826]
91. FAM82B FAM82B 374 0.719 - - - - - - 0.719 - - -
92. PSTPIP2 ENSGALG00000040136 37 0.718 - - - - - - - 0.718 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
93. TRAM2 ENSGALG00000016673 438 0.718 - - - - - - 0.718 - - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
94. BBS12 142 0.717 - - - - - - 0.717 - - - Bardet-Biedl syndrome 12
95. CYP2J22 ENSGALG00000011394 76 0.716 - - - - - - - 0.716 - - Gallus gallus cytochrome P450, family 2, subfamily J, polypeptide 22 (CYP2J22), mRNA. [Source:RefSeq mRNA;Acc:NM_001329480]
96. TDRP ENSGALG00000016356 36 0.715 - - - - - - - - - 0.715 testis development related protein [Source:HGNC Symbol;Acc:HGNC:26951]
97. PAFAH1B2 ENSGALG00000027918 418 0.715 - - - - - - - 0.715 - - platelet activating factor acetylhydrolase 1b catalytic subunit 2 [Source:NCBI gene;Acc:419765]
98. ACSS1 ENSGALG00000008632 397 0.715 - - - - - - - - - 0.715 acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
99. HAGH ENSGALG00000005398 168 0.714 - - - - - - - 0.714 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
100. FAT4 ENSGALG00000011823 774 0.713 - - - - - - 0.713 - - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA