Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNORD38

Gene Name Gene ID Reads Annotation
SNORD38 SNORD38 537











Genes with expression patterns similar to SNORD38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNORD38 SNORD38 537 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. MRGBP ENSGALG00000005531 79 0.976 - - - - - - - - 0.976 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
3. ZC3HAV1 ENSGALG00000013911 162 0.965 - - - - - - - - 0.965 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
4. FLII ENSGALG00000004997 623 0.953 - - - - - - - - 0.953 - FLII, actin remodeling protein [Source:NCBI gene;Acc:416515]
5. TTLL12 ENSGALG00000014167 714 0.943 - - - - - - - - 0.943 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
6. GUCY1A3 718 0.936 - - - - - - - - 0.936 - guanylate cyclase 1 soluble subunit alpha, transcript variant X2
7. DEF8 ENSGALG00000025712 790 0.926 - - - - - - - - 0.926 - differentially expressed in FDCP 8 homolog [Source:HGNC Symbol;Acc:HGNC:25969]
8. COL24A1 ENSGALG00000006864 161 0.923 - - - - - - - - 0.923 - collagen type XXIV alpha 1 chain, transcript variant X4
9. NCKAP5 ENSGALG00000012177, ENSGALG00000045368 266 0.921 - - - - - - - - 0.921 - NCK associated protein 5, transcript variant X8
10. AP4E1 2726 0.916 - - - - - - - - 0.916 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
11. PLCXD3 ENSGALG00000014845 247 0.916 - - - - - - - - 0.916 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
12. TRUB1 ENSGALG00000009091 1005 0.911 - - - - - - - - 0.911 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
13. CASKIN1 604 0.911 - - - - - - - - 0.911 - CASK interacting protein 1, transcript variant X4
14. BICD1 ENSGALG00000012934 112 0.91 - - - - - - - - 0.910 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
15. gga-mir-1306 ENSGALG00000025271 1231 0.903 - - - - - - - - 0.903 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
16. HAS2 ENSGALG00000029596 4192 0.901 - - - - - - - - 0.901 - hyaluronan synthase 2 [Source:NCBI gene;Acc:395594]
17. CDK10 ENSGALG00000006144 2424 0.9 - - - - - - - - 0.900 - cyclin dependent kinase 10 [Source:NCBI gene;Acc:415840]
18. C7 ENSGALG00000014835 322 0.896 - - - - - - - - 0.896 - Gallus gallus complement C7 (C7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318402]
19. FAM19A4 ENSGALG00000042228 1724 0.889 - - - - - - - - 0.889 - family with sequence similarity 19 member A4, C-C motif chemokine like [Source:HGNC Symbol;Acc:HGNC:21591]
20. FLCN ENSGALG00000004816 4101 0.881 - - - - - - - - 0.881 - folliculin, transcript variant X1
21. IFI27L2 1365 0.881 - - - - - - - - 0.881 - interferon, alpha-inducible protein 27-like 2, transcript variant X4
22. DYNC2H1 ENSGALG00000041814 1770 0.872 - - - - - - - - 0.872 - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
23. PLEKHH3 ENSGALG00000037269 875 0.869 - - - - - - - - 0.869 - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
24. KLC1 ENSGALG00000011528 1621 0.869 - - - - - - - - 0.869 - kinesin light chain 1, transcript variant X6
25. TRIM24 ENSGALG00000012823 2725 0.868 - - - - - - - - 0.868 - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
26. FOXK1 ENSGALG00000004460 1483 0.865 - - - - - - - - 0.865 - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
27. MIB1 ENSGALG00000014974 3583 0.863 - - - - - - - - 0.863 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
28. SLC10A7 ENSGALG00000010006 2064 0.863 - - - - - - - - 0.863 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
29. ERAP1 ENSGALG00000014684 713 0.862 - - - - - - - - 0.862 - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
30. OGFOD3 ENSGALG00000001618 2438 0.862 - - - - - - - - 0.862 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
31. HERC1 ENSGALG00000003381 672 0.86 - - - - - - - - 0.860 - HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, transcript variant X8
32. NUAK1 ENSGALG00000012662 411 0.859 - - - - - - - - 0.859 - NUAK family kinase 1 [Source:HGNC Symbol;Acc:HGNC:14311]
33. TUBGCP2 ENSGALG00000003526 1005 0.852 - - - - - - - - 0.852 - tubulin gamma complex associated protein 2 [Source:NCBI gene;Acc:423673]
34. NT5C1B ENSGALG00000016471 1378 0.85 - - - - - - - - 0.850 - 5'-nucleotidase, cytosolic IB
35. EXOSC8 ENSGALG00000017048 2939 0.847 - - - - - - - - 0.847 - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
36. gga-mir-6681 ENSGALG00000027840 546 0.844 - - - - - - - - 0.844 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
37. ENSGALG00000027154 ENSGALG00000027154 617 0.837 - - - - - - - - 0.837 -
38. CLN5 ENSGALG00000016917 386 0.835 - - - - - - - - 0.835 - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
39. SCARB2 ENSGALG00000011499 2763 0.835 - - - - - - - - 0.835 - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
40. PLIN3 ENSGALG00000044632 370 0.835 - - - - - - - - 0.835 - perilipin 3, transcript variant X2
41. SORD ENSGALG00000031408 2119 0.832 - - - - - - - - 0.832 - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
42. FAM35A 1187 0.829 - - - - - - - - 0.829 - family with sequence similarity 35 member A
43. ZNF618 ENSGALG00000008886 1326 0.828 - - - - - - - - 0.828 - zinc finger protein 618 [Source:HGNC Symbol;Acc:HGNC:29416]
44. ARF4 ENSGALG00000005622 50567 0.828 - - - - - - - - 0.828 - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
45. DENND1A ENSGALG00000001157 503 0.828 - - - - - - - - 0.828 - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
46. CALCOCO2 ENSGALG00000001525 3121 0.827 - - - - - - - - 0.827 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
47. NPM1 ENSGALG00000002197 24109 0.826 - - - - - - - - 0.826 - nucleophosmin [Source:NCBI gene;Acc:396203]
48. AK3 ENSGALG00000014447 1855 0.825 - - - - - - - - 0.825 - adenylate kinase 3 [Source:HGNC Symbol;Acc:HGNC:17376]
49. CCT8 ENSGALG00000015821 12161 0.821 - - - - - - - - 0.821 - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
50. DSP ENSGALG00000012790 17884 0.821 - - - - - - - - 0.821 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
51. THADA ENSGALG00000009932 2392 0.819 - - - - - - - - 0.819 - THADA, armadillo repeat containing [Source:NCBI gene;Acc:421398]
52. RTCB ENSGALG00000012611 14360 0.818 - - - - - - - - 0.818 - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
53. BRD1 ENSGALG00000029379 6047 0.817 - - - - - - - - 0.817 - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
54. NAF1 ENSGALG00000009496 2003 0.815 - - - - - - - - 0.815 - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
55. HNRNPK ENSGALG00000012591 1109 0.814 - - - - - - - - 0.814 - heterogeneous nuclear ribonucleoprotein K, transcript variant X8
56. COX11 ENSGALG00000027190 4475 0.806 - - - - - - - - 0.806 - cytochrome c oxidase copper chaperone COX11 [Source:HGNC Symbol;Acc:HGNC:2261]
57. CARHSP1 ENSGALG00000042981 6920 0.805 - - - - - - - - 0.805 - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
58. MIA2 ENSGALG00000010189 1223 0.805 - - - - - - - - 0.805 - melanoma inhibitory activity 2, transcript variant X5
59. VPS72 ENSGALG00000000793 329 0.801 - - - - - - - - 0.801 - vacuolar protein sorting 72 homolog [Source:HGNC Symbol;Acc:HGNC:11644]
60. CCDC86 ENSGALG00000036935 5280 0.8 - - - - - - - - 0.800 - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
61. L3HYPDH ENSGALG00000012011 2212 0.799 - - - - - - - - 0.799 - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
62. DBR1 ENSGALG00000043797 1896 0.798 - - - - - - - - 0.798 - debranching RNA lariats 1 [Source:NCBI gene;Acc:429118]
63. PDE10A ENSGALG00000011537 642 0.794 - - - - - - - - 0.794 - phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
64. RUVBL1 ENSGALG00000005931 9379 0.789 - - - - - - - - 0.789 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
65. TIPIN ENSGALG00000007649 3565 0.786 - - - - - - - - 0.786 - TIMELESS interacting protein [Source:NCBI gene;Acc:415548]
66. VPS39 ENSGALG00000008991 4018 0.78 - - - - - - - - 0.780 - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
67. ENSGALG00000021024 ENSGALG00000021024 1339 0.779 - - - - - - - - 0.779 -
68. UBR4 ENSGALG00000030563 5225 0.779 - - - - - - - - 0.779 - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
69. PTPRG ENSGALG00000007177 2341 0.778 - - - - - - - - 0.778 - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
70. KTN1 ENSGALG00000012137 4058 0.777 - - - - - - - - 0.777 - kinectin 1 [Source:NCBI gene;Acc:396335]
71. NOTCH2 ENSGALG00000002922 3272 0.777 - - - - - - - - 0.777 - notch 2 [Source:NCBI gene;Acc:374031]
72. ATAD5 ENSGALG00000003294 4830 0.776 - - - - - - - - 0.776 - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
73. VPS35 ENSGALG00000004375 8059 0.775 - - - - - - - - 0.775 - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
74. ZDHHC14 ENSGALG00000013695 2648 0.773 - - - - - - - - 0.773 - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
75. GMPS ENSGALG00000010284 8765 0.773 - - - - - - - - 0.773 - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
76. SPICE1 ENSGALG00000045606 680 0.766 - - - - - - - - 0.766 - spindle and centriole associated protein 1, transcript variant X11
77. FAM110D ENSGALG00000046085 2193 0.765 - - - - - - - - 0.765 - family with sequence similarity 110 member D [Source:HGNC Symbol;Acc:HGNC:25860]
78. NCL ENSGALG00000032930 66655 0.765 - - - - - - - - 0.765 - nucleolin [Source:NCBI gene;Acc:396201]
79. GHITM ENSGALG00000021262 7159 0.764 - - - - - - - - 0.764 - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
80. PPP2CA ENSGALG00000006462 26306 0.759 - - - - - - - - 0.759 - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
81. TXNDC16 2095 0.758 - - - - - - - - 0.758 - thioredoxin domain containing 16, transcript variant X3
82. FBXO25 ENSGALG00000016359 1547 0.758 - - - - - - - - 0.758 - F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
83. SUCLG1 ENSGALG00000015961 14323 0.757 - - - - - - - - 0.757 - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
84. NDUFS6 ENSGALG00000013191 15874 0.755 - - - - - - - - 0.755 - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
85. VAMP3 ENSGALG00000000579 720 0.753 - - - - - - - - 0.753 - vesicle-associated membrane protein 3 [Source:NCBI gene;Acc:419368]
86. ABCC8 ENSGALG00000006172 41 0.753 - - - - - - - - 0.753 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
87. NECAP2 ENSGALG00000003745 4899 0.752 - - - - - - - - 0.752 - NECAP endocytosis associated 2 [Source:NCBI gene;Acc:419464]
88. FAM120B ENSGALG00000011180 101 0.751 - - - - - - - - 0.751 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
89. PCLO 249 0.748 - - - - - - - - 0.748 - piccolo presynaptic cytomatrix protein
90. ATP6V0A2 ENSGALG00000003194 4824 0.746 - - - - - - - - 0.746 - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
91. SHOC2 ENSGALG00000008771 2957 0.746 - - - - - - - - 0.746 - SHOC2, leucine rich repeat scaffold protein [Source:NCBI gene;Acc:423894]
92. VMP1 ENSGALG00000005160 12859 0.745 - - - - - - - - 0.745 - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
93. MARK1 ENSGALG00000009483 10350 0.745 - - - - - - - - 0.745 - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
94. DCAF6 ENSGALG00000015435 3704 0.742 - - - - - - - - 0.742 - DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:HGNC:30002]
95. MBSP MBSP 5634 0.739 - - - - - - - - 0.739 -
96. CAT ENSGALG00000030187 7534 0.735 - - - - - - - - 0.735 - catalase [Source:NCBI gene;Acc:423600]
97. PHB2 ENSGALG00000014567 104774 0.734 - - - - - - - - 0.734 - prohibitin 2 [Source:NCBI gene;Acc:771124]
98. KLHL15 ENSGALG00000016345 1638 0.733 - - - - - - - - 0.733 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
99. ALMS1 ENSGALG00000044620 570 0.732 - - - - - - - - 0.732 - ALMS1, centrosome and basal body associated protein, transcript variant X1
100. EPB41L3 ENSGALG00000038678 5863 0.732 - - - - - - - - 0.732 - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]

There are 53 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA