Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNORD18_1

Gene Name Gene ID Reads Annotation
SNORD18_1 SNORD18_1 5










Genes with expression patterns similar to SNORD18_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SNORD18_1 SNORD18_1 5 4 - 1.000 - - - - 1.000 1.000 1.000
2. slc2a5 ENSDARG00000077875 5 2 - - - - - - 1.000 - 1.000 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
3. CABZ01063077.1 CABZ01063077.1 22 1.923 - 1.000 - - - - 0.923 - -
4. INA INA 950 1.919 - 0.987 - - - - 0.932 - -
5. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.913 - 0.946 - - - - 0.967 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
6. TMEM151A ENSDARG00000077986 78 1.91 - 0.955 - - - - 0.955 - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
7. nup214 ENSDARG00000016212 163 1.867 - 0.892 - - - - 0.975 - - nucleoporin 214 [Source:ZFIN;Acc:ZDB-GENE-110203-3]
8. RPS6KL1 ENSDARG00000079024 22 1.859 - 1.000 - - - - 0.859 - - ribosomal protein S6 kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-111020-10]
9. RHOBTB1 ENSDARG00000079468 189 1.855 - 0.855 - - - - 1.000 - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
10. hivep3a ENSDARG00000075928 17 1.8 - 0.800 - - - - 1.000 - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
11. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.779 - 0.824 - - - - 0.955 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
12. si:ch211-214c7.4 ENSDARG00000069595 56 1.777 - 0.777 - - - - 1.000 - - si:ch211-214c7.4 [Source:ZFIN;Acc:ZDB-GENE-030131-6275]
13. brd2b ENSDARG00000046087 73 1.77 - 0.770 - - - - 1.000 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
14. nt5c1ba ENSDARG00000018153 31 1.765 - 0.977 - - - - 0.788 - - 5'-nucleotidase, cytosolic IB a [Source:ZFIN;Acc:ZDB-GENE-070424-103]
15. nrxn3a ENSDARG00000043746 54 1.763 - 1.000 - - - - 0.763 - - neurexin 3a [Source:ZFIN;Acc:ZDB-GENE-070206-9]
16. HRASLS ENSDARG00000100021 16 1.759 - - - - - - 0.859 0.900 - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
17. adcyap1a ENSDARG00000004015 67 1.747 - - - - - - 1.000 - 0.747 adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
18. gabra5 ENSDARG00000070730 156 1.746 - 1.000 - - - - 0.746 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
19. si:ch211-278j3.3 ENSDARG00000020284 478 1.736 - 0.968 - - - - 0.768 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
20. KIF1A KIF1A 1686 1.726 - 0.938 - - - - 0.788 - -
21. FP102801.1_1 FP102801.1_1 238 1.723 - 0.831 - - - - 0.892 - -
22. adam11 ENSDARG00000079204 298 1.717 - 0.912 - - - - 0.805 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
23. fgf13b ENSDARG00000056633 455 1.703 - 0.853 - - - - 0.850 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
24. nbeaa ENSDARG00000070080 862 1.703 - 0.881 - - - - 0.822 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
25. rab6bb ENSDARG00000031343 1381 1.684 - 0.865 - - - - 0.819 - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
26. cdk5r1b ENSDARG00000045087 2075 1.658 - 0.767 - - - - 0.891 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
27. psmf1 ENSDARG00000022652 527 1.636 - 0.769 - - - - 0.867 - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
28. trim44 ENSDARG00000051761 509 1.616 - 0.901 - - - - 0.715 - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
29. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.609 - 0.900 - - - - 0.709 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
30. PHYHIP ENSDARG00000116497 456 1.576 - 0.803 - - - - 0.773 - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
31. si:ch211-237c9.3 si:ch211-237c9.3 17 1.557 - - - - - - 0.844 - 0.713
32. SHARPIN ENSDARG00000076995 235 1.546 - 0.811 - - - - 0.735 - - SHANK-associated RH domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-101223-1]
33. si:dkeyp-33e11.2 si:dkeyp-33e11.2 232 1.539 - 0.817 - - - - 0.722 - -
34. ppp3ca ENSDARG00000004988 615 1.535 - 0.770 - - - - 0.765 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
35. SV2A ENSDARG00000059945 1278 1.53 - 0.765 - - - - 0.765 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
36. si:dkey-7b17.1 si:dkey-7b17.1 101 1.481 - - - - - - 0.704 0.777 -
37. CABZ01053381.1 CABZ01053381.1 1 1 - - - - - - - - 1.000
38. pgap1 ENSDARG00000062465 30 1 - - - - - - 1.000 - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
39. gpr173 ENSDARG00000042922 238 1 - - - - - - 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
40. b3gntl1 ENSDARG00000043431 50 1 - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]
41. smpdl3a ENSDARG00000053119 1 1 - - - - - - 1.000 - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
42. SSBP2 ENSDARG00000099727 22 1 - - - - - - 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
43. CR936540.2 CR936540.2 4 1 - - - - - - 1.000 - -
44. lhx8a ENSDARG00000002330 25 1 - - - - - - 1.000 - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
45. tbxas1 ENSDARG00000002249 55 1 - - - - - - 1.000 - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
46. smtlb ENSDARG00000017251 7 1 - - - - - - 1.000 - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
47. sf3b3 ENSDARG00000103553 57 1 - - - - - - 1.000 - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
48. si:ch211-224l10.4 ENSDARG00000088762 36 1 - 1.000 - - - - - - - si:ch211-224l10.4 [Source:ZFIN;Acc:ZDB-GENE-090312-125]
49. HIST1H4J_4 HIST1H4J_4 9 1 - - - - - - 1.000 - -
50. mir196b ENSDARG00000081346 35 1 - - - - - - - - 1.000 microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
51. mir92b 95 1 - - - - - - 1.000 - - microRNA 92b
52. ENDOD1_7 ENDOD1_7 33 1 - - - - - - 1.000 - -
53. sstr3 ENSDARG00000014477 14 1 - - - - - - 1.000 - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
54. antxr1a ENSDARG00000025672 32 1 - 1.000 - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
55. TNFRSF14_8 TNFRSF14_8 6 1 - 1.000 - - - - - - -
56. VSTM5 4 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 5
57. rab11bb_1 ENSDARG00000090086 7 1 - - - - - - 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
58. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - - 1.000 - -
59. si:ch211-191a6.3 si:ch211-191a6.3 6 1 - 1.000 - - - - - - -
60. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - - - - - - 1.000
61. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - - - 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
62. mecom ENSDARG00000060808 8 1 - 1.000 - - - - - - - MDS1 and EVI1 complex locus [Source:ZFIN;Acc:ZDB-GENE-050208-123]
63. arl11l arl11l 31 1 - - - - - - 1.000 - -
64. emilin2a ENSDARG00000061196 57 1 - - - - - - 1.000 - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
65. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - - - 1.000 - -
66. styxl1 ENSDARG00000026338 29 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
67. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - - - 1.000 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
68. CRISP3 CRISP3 0 1 - - - - - - 1.000 - -
69. ntrk3b ENSDARG00000086214 1 1 - - - - - - 1.000 - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
70. CYP46A1 CYP46A1 16 1 - - - - - - 1.000 - -
71. si:dkey-17m8.2 ENSDARG00000035797 40 1 - 1.000 - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
72. c1galt1a ENSDARG00000055585, ENSDARG00000112143 53 1 - - - - - - 1.000 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a [Source:ZFIN;Acc:ZDB-GENE-061013-303]
73. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
74. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - - 1.000 - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
75. si:dkey-46g23.3 si:dkey-46g23.3 16 1 - 1.000 - - - - - - -
76. grtp1b ENSDARG00000030269 24 1 - 1.000 - - - - - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
77. pde8a ENSDARG00000087941 11 1 - - - - - - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
78. si:ch73-92e7.4 ENSDARG00000092849, ENSDARG00000110100 37 1 - - - - - - 1.000 - - si:ch73-92e7.4 [Source:ZFIN;Acc:ZDB-GENE-081031-48]
79. dnah7l dnah7l 2 1 - - - - - - 1.000 - -
80. TENM3 ENSDARG00000005479 39 1 - - - - - - 1.000 - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
81. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - - - - 1.000 aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
82. BX248582.3 BX248582.3 3 1 - - - - - - 1.000 - -
83. prph2a ENSDARG00000038018 2 1 - - - - - - 1.000 - - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
84. zgc:153932 ENSDARG00000052779, ENSDARG00000113315 3 1 - - - - - - 1.000 - - zgc:153932 [Source:ZFIN;Acc:ZDB-GENE-070209-223]
85. scd ENSDARG00000033662 146 1 - - - - - - 1.000 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
86. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - - 1.000 - -
87. klhl4 ENSDARG00000016531 47 1 - - - - - - 1.000 - - kelch-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-070410-63]
88. si:dkey-3d18.5 ENSDARG00000096239 3 1 - - - - - - - - 1.000 si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
89. slc12a8 ENSDARG00000074384 12 1 - 1.000 - - - - - - - solute carrier family 12, member 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5654]
90. phf20a ENSDARG00000002750 90 1 - - - - - - 1.000 - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
91. her3 ENSDARG00000076857 131 1 - - - - - - 1.000 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
92. slc1a1 ENSDARG00000020212 104 1 - - - - - - 1.000 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
93. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 1 - - - - - - 1.000 - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
94. plscr3a ENSDARG00000093078 7 1 - - - - - - 1.000 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
95. golim4a ENSDARG00000100977, ENSDARG00000106760, ENSDARG00000113393 144 1 - - - - - - 1.000 - - golgi integral membrane protein 4a [Source:ZFIN;Acc:ZDB-GENE-041026-2]
96. ttc39a ENSDARG00000074126 7 1 - 1.000 - - - - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
97. crabp1a ENSDARG00000045926 99 1 - - - - - - 1.000 - - cellular retinoic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-020320-3]
98. Mar-04 Mar-04 21 1 - - - - - - 1.000 - -
99. si:dkey-58f10.12 ENSDARG00000092680 258 1 - 1.000 - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
100. entpd3 ENSDARG00000035309 263 1 - - - - - - 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]

There are 1166 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA