Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNORA57

Gene Name Gene ID Reads Annotation
SNORA57 SNORA57 148










Genes with expression patterns similar to SNORA57

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SNORA57 SNORA57 148 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. mir10b-2 116 2.568 - - 0.785 - - 0.985 0.798 - - microRNA 10b-2
3. fam110b ENSDARG00000088073 420 2.422 - 0.804 - 0.881 - 0.737 - - - family with sequence similarity 110, member B [Source:ZFIN;Acc:ZDB-GENE-050626-70]
4. smpd5 ENSDARG00000059811, ENSDARG00000117140 60 1.877 - 0.893 - - - 0.984 - - - sphingomyelin phosphodiesterase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-22]
5. BX323449.2 BX323449.2 50 1.872 - - - - - 0.973 - 0.899 -
6. sdr42e1 ENSDARG00000098838 25 1.848 - 0.856 - - - 0.992 - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
7. parp6a ENSDARG00000042703 112 1.84 - - - 0.890 - 0.950 - - - poly (ADP-ribose) polymerase family, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-272]
8. hsp70l_1 ENSDARG00000055723 72 1.822 - - - 0.852 - 0.970 - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
9. olfm1a ENSDARG00000018270 107 1.805 - - - 0.873 - 0.932 - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
10. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.79 - - - - - 0.992 0.798 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
11. NPFFR1 ENSDARG00000111997 29 1.78 - - - - - 0.982 0.798 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
12. kctd1 ENSDARG00000074056 652 1.774 - 0.786 - - - 0.988 - - - potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
13. cbln1 ENSDARG00000057296 165 1.747 - - - 0.790 - 0.957 - - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
14. slc46a1 ENSDARG00000026149 297 1.736 - - 0.766 - - 0.970 - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
15. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.72 - - - 0.869 - 0.851 - - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
16. C8H1orf194 C8H1orf194 111 1.697 - 0.771 - - - 0.926 - - -
17. MFAP4_3 MFAP4_3 7 1.686 - - - - - - - 0.937 0.749
18. pld3 ENSDARG00000068199 205 1.683 - 0.715 - - - 0.968 - - - phospholipase D family, member 3 [Source:ZFIN;Acc:ZDB-GENE-050419-212]
19. zgc:162160 ENSDARG00000060259 117 1.678 - - 0.794 - - 0.884 - - - zgc:162160 [Source:ZFIN;Acc:ZDB-GENE-070424-22]
20. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 1.677 - - - 0.742 - 0.935 - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
21. ANKRD6 ANKRD6 73 1.66 - 0.847 - - - - - 0.813 -
22. zgc:112294 ENSDARG00000010602 23 1.659 - - - - - - 0.754 0.905 - zgc:112294 [Source:ZFIN;Acc:ZDB-GENE-050522-418]
23. CR847906.1 ENSDARG00000099493 88 1.658 - - 0.751 - - 0.907 - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
24. si:dkey-45d16.4 72 1.657 - 0.704 - - - 0.953 - - - si:dkey-45d16.4
25. B4GALNT1 B4GALNT1 352 1.632 - - - 0.813 - 0.819 - - -
26. LINGO2 LINGO2 300 1.631 - - - 0.721 - 0.910 - - -
27. CABZ01049057.1 CABZ01049057.1 479 1.62 - - - 0.771 - 0.849 - - -
28. gnsa ENSDARG00000023766 545 1.619 - - - 0.802 - 0.817 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
29. ARID5B ENSDARG00000037196 165 1.619 - 0.704 - - - 0.915 - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
30. VSTM2B VSTM2B 149 1.59 - - - 0.852 - 0.738 - - -
31. avpr1b avpr1b 58 1.57 - - 0.718 - - 0.852 - - -
32. arntl1b ENSDARG00000035732, ENSDARG00000114562 349 1.562 - 0.806 - - 0.756 - - - - aryl hydrocarbon receptor nuclear translocator-like 1b [Source:ZFIN;Acc:ZDB-GENE-030408-1]
33. tnfaip3 ENSDARG00000027777 1066 1.561 - - - 0.840 - 0.721 - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
34. si:ch211-241e1.5 ENSDARG00000008906 70 1.559 - - - - 0.750 0.809 - - - si:ch211-241e1.5 [Source:ZFIN;Acc:ZDB-GENE-030131-6298]
35. atl1 ENSDARG00000060481 251 1.559 - - 0.722 - - 0.837 - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
36. SLC27A3 SLC27A3 240 1.556 - - - 0.818 - - 0.738 - -
37. dctn1a ENSDARG00000019743 45 1.553 - - - - - - - 0.824 0.729 dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
38. mppe1 ENSDARG00000045416 340 1.551 - 0.744 - - - 0.807 - - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
39. SMC6 ENSDARG00000091821 165 1.538 - - - - - 0.827 - 0.711 - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
40. kcnq5b ENSDARG00000069953 107 1.536 - - - 0.825 - - 0.711 - - potassium voltage-gated channel, KQT-like subfamily, member 5b [Source:ZFIN;Acc:ZDB-GENE-090312-178]
41. pear1 ENSDARG00000060753 173 1.529 - - - 0.814 - - - 0.715 - platelet endothelial aggregation receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091230-1]
42. lpcat1 ENSDARG00000011506 263 1.503 - 0.724 - - - 0.779 - - - lysophosphatidylcholine acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-915]
43. BX682234.1 ENSDARG00000074732 5 1.502 - 0.704 - - - - 0.798 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
44. fbxo21 ENSDARG00000076611 466 1.486 - - 0.747 0.739 - - - - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
45. si:dkey-267k7.4 si:dkey-267k7.4 111 1.483 - 0.773 - - - - - 0.710 -
46. fam65b 557 1.475 - - - 0.763 - 0.712 - - - family with sequence similarity 65, member B, transcript variant X4
47. sat2b ENSDARG00000104221 674 1.474 - - 0.763 0.711 - - - - - spermidine/spermine N1-acetyltransferase family member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-292]
48. coro1a ENSDARG00000054610, ENSDARG00000111327 479 1.47 - - 0.709 0.761 - - - - - coronin, actin binding protein, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-9512]
49. ROBO3_1 ROBO3_1 468 1.469 - - - 0.726 - 0.743 - - -
50. rxrab ENSDARG00000035127 231 1.469 - - - 0.732 - - 0.737 - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
51. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.456 - - - 0.737 - 0.719 - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
52. slc7a10a ENSDARG00000008100 178 1.446 - - - - - 0.740 - 0.706 - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
53. arap3 ENSDARG00000076801 725 1.436 - - - 0.718 - - 0.718 - - ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-091019-1]
54. ENSDARG00000074705 ENSDARG00000074705 507 1.436 - - - 0.728 - 0.708 - - -
55. tubb1 ENSDARG00000053066 364 1.434 - 0.728 - - - - 0.706 - - tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
56. cx52.9 ENSDARG00000086453 7 1.427 - 0.704 - - - - - - 0.723 connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
57. si:ch211-215c18.3 ENSDARG00000095308 11 1 - - - - - - - 1.000 - si:ch211-215c18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-105]
58. nr5a1b ENSDARG00000023362 54 1 - - - - - - 1.000 - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
59. PRKD2_1 PRKD2_1 1 1 - - - - - - - 1.000 -
60. CR383676.3_2 CR383676.3_2 9 1 - - - - - - 1.000 - -
61. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - - - 1.000 -
62. GPR97_1 GPR97_1 2 1 - - - - - - - 1.000 -
63. prkaa2 ENSDARG00000060641 12 1 - - - - - - 1.000 - - protein kinase, AMP-activated, alpha 2 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081120-5]
64. CABZ01072254.1 ENSDARG00000076111 4 1 - - - - - - - 1.000 - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
65. BX005082.1 ENSDARG00000098558 2 1 - - - - - - - 1.000 -
66. CR628323.3 ENSDARG00000106158 1 1 - - - - - - - 1.000 - tumor protein p53 inducible protein 3 [Source:NCBI gene;Acc:796473]
67. fam26f 595 1 - - - - - - 1.000 - - family with sequence similarity 26, member F
68. RBBP6_6 RBBP6_6 1 1 - - - - - - - 1.000 -
69. efemp2b_1 ENSDARG00000020811 77 1 - - - - - - - 1.000 - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
70. arsa ENSDARG00000042270 74 1 - - - - - - 1.000 - - arylsulfatase A [Source:ZFIN;Acc:ZDB-GENE-050320-118]
71. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - - 1.000 -
72. zgc:174275 ENSDARG00000099845 172 1 - - - - - - 1.000 - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
73. arnt ENSDARG00000021855, ENSDARG00000115999 32 1 - 1.000 - - - - - - - aryl hydrocarbon receptor nuclear translocator [Source:ZFIN;Acc:ZDB-GENE-060126-7]
74. VSTM5 4 1 - - - - - - - 1.000 - V-set and transmembrane domain containing 5
75. kcnq5a ENSDARG00000069954 492 1 - 1.000 - - - - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
76. si:dkey-102c8.2 ENSDARG00000058537, ENSDARG00000112361 3 1 - - - - - - - 1.000 - si:dkey-102c8.2 [Source:ZFIN;Acc:ZDB-GENE-050208-329]
77. lgals3bpb ENSDARG00000040528 32 1 - - - - - - 1.000 - - lectin, galactoside-binding, soluble, 3 binding protein b [Source:ZFIN;Acc:ZDB-GENE-040426-2262]
78. PEG3_19 PEG3_19 29 1 - - - - - - 1.000 - -
79. CNGA1 3 1 - - - - - - - 1.000 - cyclic nucleotide gated channel alpha 1
80. CABZ01038493.1 ENSDARG00000117625 983 1 - - - - - - 1.000 - -
81. LRRC38 LRRC38 5 1 - - - - - - - 1.000 -
82. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - - - - - - - 1.000 -
83. dapk3 ENSDARG00000074447 12 1 - - - - - - - 1.000 - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
84. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - - - 1.000 - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
85. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - - - 1.000 - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
86. si:busm1-163l24.3 31 1 - 1.000 - - - - - - - si:busm1-163l24.3
87. si:ch211-125e6.5 ENSDARG00000069381 2 1 - - - - - - - 1.000 - si:ch211-125e6.5 [Source:ZFIN;Acc:ZDB-GENE-070912-39]
88. si:ch73-335d12.2 ENSDARG00000025505 1 1 - - - - - - - 1.000 - si:ch73-335d12.2 [Source:ZFIN;Acc:ZDB-GENE-060503-423]
89. lin9 ENSDARG00000028475 77 1 - - - - - - 1.000 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
90. TMEM245 ENSDARG00000070455 85 1 - - - - - - 1.000 - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
91. zar1l ENSDARG00000055973, ENSDARG00000116232 2 1 - - - - - - - 1.000 - zygote arrest 1-like [Source:ZFIN;Acc:ZDB-GENE-060810-119]
92. BX005410.2 BX005410.2 44 1 - - - - - - 1.000 - -
93. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - - 1.000 - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
94. si:dkey-14a7.5 si:dkey-14a7.5 1 1 - - - - - - - 1.000 -
95. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.997 - - - - - 0.997 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
96. si:dkey-81p22.11 ENSDARG00000093797 68 0.997 - - - - - 0.997 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
97. KCNS1 KCNS1 24 0.997 - - - - - 0.997 - - -
98. slc35a5 ENSDARG00000000001 17 0.992 - - - - - 0.992 - - - solute carrier family 35, member A5 [Source:ZFIN;Acc:ZDB-GENE-030616-55]
99. PFKFB1 ENSDARG00000037140 5 0.992 - - - - - 0.992 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5664]
100. scpp5 ENSDARG00000078622 15 0.992 - - - - - 0.992 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]

There are 1699 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA