Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNORA53

Gene Name Gene ID Reads Annotation
SNORA53 SNORA53 6











Genes with expression patterns similar to SNORA53

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNORA53 SNORA53 6 4 - - 1.000 1.000 1.000 - - - - 1.000
2. CUBN ENSGALG00000008704 21 2 - - 1.000 - - - - - - 1.000 cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
3. AREG ENSGALG00000010866 16 1.947 - - - 0.979 - - - - - 0.968 amphiregulin [Source:NCBI gene;Acc:428752]
4. CBL ENSGALG00000029077 6 1.529 - - 0.732 0.797 - - - - - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
5. THAP1 ENSGALG00000015385 15 1.49 - - - - 0.732 - - - - 0.758 THAP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20856]
6. BF1 ENSGALG00000033932 18 1 - - - - - - - - - 1.000 MHC BF1 class I [Source:NCBI gene;Acc:693260]
7. C3orf83 C3orf83 117 1 - - - - 1.000 - - - - -
8. MAPK15 ENSGALG00000029279 1 1 - - 1.000 - - - - - - - mitogen-activated protein kinase 15 [Source:HGNC Symbol;Acc:HGNC:24667]
9. IRF-4 IRF-4 19 1 - - 1.000 - - - - - - -
10. STX3 ENSGALG00000035153 1 1 - - - - 1.000 - - - - - syntaxin 3
11. CLCA2 8 1 - - 1.000 - - - - - - - chloride channel accessory 2, transcript variant X1
12. TELO2 ENSGALG00000009297 1 1 - - 1.000 - - - - - - - telomere maintenance 2 [Source:HGNC Symbol;Acc:HGNC:29099]
13. MXI1 ENSGALG00000008555 4 1 - - - - 1.000 - - - - - MAX interactor 1, dimerization protein [Source:NCBI gene;Acc:423888]
14. ENSGALG00000026222 ENSGALG00000026222 3 1 - - - - - - - - - 1.000
15. VIPR1 ENSGALG00000005259 3 1 - - - - - - - - - 1.000 vasoactive intestinal peptide receptor 1 [Source:NCBI gene;Acc:395329]
16. C8orf88 ENSGALG00000037992 28 1 - - 1.000 - - - - - - - chromosome 8 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:44672]
17. LOXL4 ENSGALG00000013090 9 1 - - - - 1.000 - - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
18. XKRX ENSGALG00000006637 13 1 - - - - - - - - - 1.000 XK related, X-linked, transcript variant X4
19. snoU109 snoU109 1 1 - - 1.000 - - - - - - -
20. RAB7L1 RAB7L1 1 1 - - - - 1.000 - - - - -
21. SNORA81 SNORA81 15 1 - - - - 1.000 - - - - -
22. HOPX ENSGALG00000011404 10 1 - - - - 1.000 - - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
23. DNAJC6 ENSGALG00000011041 4 1 - - 1.000 - - - - - - - DnaJ heat shock protein family (Hsp40) member C6 [Source:NCBI gene;Acc:424698]
24. KCNQ3 ENSGALG00000037626 6 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily Q member 3 [Source:HGNC Symbol;Acc:HGNC:6297]
25. CKV6.3 CKV6.3 13 1 - - - - - - - - - 1.000
26. ENSGALG00000004157 ENSGALG00000004157 1 1 - - 1.000 - - - - - - -
27. ENSGALG00000008453 ENSGALG00000008453 1 1 - - 1.000 - - - - - - -
28. CDR2 ENSGALG00000025743 145 1 - - - - 1.000 - - - - - cerebellar degeneration related protein 2 [Source:NCBI gene;Acc:416621]
29. LYG2 ENSGALG00000016761 7 1 - - - - - - - - - 1.000 lysozyme g2 [Source:NCBI gene;Acc:395708]
30. IGFBP2 ENSGALG00000011469 26 1 - - - - 1.000 - - - - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
31. COL25A1 ENSGALG00000039411 5 1 - - - - - - - - - 1.000 collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
32. GAREML GAREML 8 1 - - 1.000 - - - - - - -
33. PGA3 ENSGALG00000000437 2 1 - - 1.000 - - - - - - - pepsinogen 3, group I (pepsinogen A) [Source:NCBI gene;Acc:395926]
34. ENSGALG00000026580 ENSGALG00000026580 4 1 - - 1.000 - - - - - - -
35. OTUD7B ENSGALG00000013348 38 1 - - - - 1.000 - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
36. ENSGALG00000015324 ENSGALG00000015324 10 1 - - 1.000 - - - - - - -
37. FAM46B 21 1 - - - - 1.000 - - - - - family with sequence similarity 46 member B
38. AGT ENSGALG00000011117 7 1 - - - - 1.000 - - - - - angiotensinogen [Source:HGNC Symbol;Acc:HGNC:333]
39. TLR7 ENSGALG00000016590 6 1 - - - - 1.000 - - - - - toll like receptor 7 [Source:NCBI gene;Acc:418638]
40. PPP4R1L 15 1 - - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1-like, transcript variant X2
41. ENSGALG00000009178 ENSGALG00000009178 1 1 - - 1.000 - - - - - - -
42. CTBS ENSGALG00000008780 26 1 - - 1.000 - - - - - - - chitobiase [Source:HGNC Symbol;Acc:HGNC:2496]
43. LAMP5 ENSGALG00000008918 1 1 - - 1.000 - - - - - - - lysosomal associated membrane protein family member 5 [Source:HGNC Symbol;Acc:HGNC:16097]
44. gga-mir-16c ENSGALG00000024495 1 1 - - 1.000 - - - - - - - gga-mir-16c [Source:miRBase;Acc:MI0007563]
45. ENTPD5 ENSGALG00000010202 69 0.986 - - - - - - - - - 0.986 ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
46. MANSC4 32 0.985 - - - - - - - - - 0.985 MANSC domain containing 4, transcript variant X1
47. SORL1 ENSGALG00000006598 39 0.982 - - - - - - - - - 0.982 sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
48. FHL1 ENSGALG00000006190 22 0.981 - - - 0.981 - - - - - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
49. TMEM81 ENSGALG00000045530 1 0.979 - - - 0.979 - - - - - - transmembrane protein 81 [Source:HGNC Symbol;Acc:HGNC:32349]
50. MYO19 9 0.979 - - - 0.979 - - - - - - myosin XIX, transcript variant X5
51. TMEM121 ENSGALG00000002756 5 0.979 - - - 0.979 - - - - - - transmembrane protein 121 [Source:NCBI gene;Acc:395216]
52. ENTPD3 ENSGALG00000030493 1 0.979 - - - 0.979 - - - - - - Gallus gallus ectonucleoside triphosphate diphosphohydrolase 3 (ENTPD3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321564]
53. MAPK14 ENSGALG00000042833 13 0.979 - - - 0.979 - - - - - - mitogen-activated protein kinase 14 [Source:HGNC Symbol;Acc:HGNC:6876]
54. GNRH1 9 0.979 - - - 0.979 - - - - - - gonadotropin releasing hormone 1
55. ANG ANG 15 0.979 - - - 0.979 - - - - - -
56. PADI1 ENSGALG00000039572 4 0.979 - - - 0.979 - - - - - - Gallus gallus peptidyl arginine deiminase 1 (PADI1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318439]
57. PDZD3 ENSGALG00000006779 24 0.979 - - - 0.979 - - - - - - PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:19891]
58. GABRR2 ENSGALG00000015776 1 0.979 - - - 0.979 - - - - - - gamma-aminobutyric acid type A receptor rho2 subunit [Source:HGNC Symbol;Acc:HGNC:4091]
59. DNAH14 ENSGALG00000045078 1 0.979 - - - 0.979 - - - - - - dynein, axonemal, heavy chain 14
60. ENSGALG00000011449 ENSGALG00000011449 2 0.979 - - - 0.979 - - - - - -
61. ENSGALG00000012382 ENSGALG00000012382 10 0.979 - - - 0.979 - - - - - -
62. ARHGEF33 ENSGALG00000013221 2 0.979 - - - 0.979 - - - - - - Rho guanine nucleotide exchange factor 33 [Source:HGNC Symbol;Acc:HGNC:37252]
63. TFF2 ENSGALG00000016165 1 0.979 - - - 0.979 - - - - - - trefoil factor 2 [Source:HGNC Symbol;Acc:HGNC:11756]
64. VENTX VENTX 50 0.979 - - - 0.979 - - - - - -
65. MOCOS ENSGALG00000013149 25 0.979 - - - 0.979 - - - - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
66. ANKDD1B ENSGALG00000014958 3 0.979 - - - 0.979 - - - - - - ankyrin repeat and death domain containing 1B [Source:HGNC Symbol;Acc:HGNC:32525]
67. SNORA56 SNORA56 7 0.979 - - - 0.979 - - - - - -
68. RSAD2 ENSGALG00000016400 1 0.979 - - - 0.979 - - - - - - radical S-adenosyl methionine domain containing 2 [Source:NCBI gene;Acc:428650]
69. FAM126B ENSGALG00000020869 19 0.978 - - - - - - - - - 0.978 family with sequence similarity 126 member B [Source:HGNC Symbol;Acc:HGNC:28593]
70. COL23A1 ENSGALG00000006708 181 0.967 - - - - - - - - - 0.967 collagen type XXIII alpha 1 chain, transcript variant X1
71. IKZF1 ENSGALG00000013086 58 0.964 - - - - - - - - - 0.964 IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
72. PEAK1 ENSGALG00000002759 39 0.96 - - - - - - - - - 0.960 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
73. UTS2RL ENSGALG00000012419 118 0.956 - - - - - - - - - 0.956 urotensin-2 receptor-like
74. TC2N ENSGALG00000010738 92 0.944 - - - - - - - - - 0.944 tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
75. ARHGAP15 ENSGALG00000012421 58 0.936 - - - - - - - - - 0.936 Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
76. GABRB4 GABRB4 12 0.934 - - - - - - - - - 0.934
77. CHSY3 ENSGALG00000026899 80 0.932 - - - - - - - - - 0.932 chondroitin sulfate synthase 3 [Source:HGNC Symbol;Acc:HGNC:24293]
78. MUC5B MUC5B 62 0.932 - - - - - - - - - 0.932
79. ZFAT ENSGALG00000037698 34 0.931 - - - - - - - - - 0.931 zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
80. CCDC147 CCDC147 53 0.929 - - - - - - - - - 0.929
81. KIAA1549L ENSGALG00000012020 33 0.925 - - - - - - - - - 0.925 KIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]
82. TMTC1 ENSGALG00000012956 160 0.923 - - - - - - - - - 0.923 transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
83. SERPINB14 SERPINB14 196 0.923 - - - - - - - - - 0.923
84. IL34 ENSGALG00000028466 270 0.922 - - - - - - - - - 0.922 interleukin 34
85. SYDE2 ENSGALG00000038776 192 0.917 - - - - - - - - - 0.917 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
86. MYH1G ENSGALG00000028612 7 0.916 - - - - - - - - - 0.916 Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
87. FGF7 ENSGALG00000028158 189 0.914 - - - - - - - - - 0.914 fibroblast growth factor 7 [Source:NCBI gene;Acc:415439]
88. CDKL5 ENSGALG00000016529 26 0.914 - - - - - - - - - 0.914 cyclin dependent kinase like 5 [Source:HGNC Symbol;Acc:HGNC:11411]
89. FRRS1 ENSGALG00000005418 332 0.914 - - - - - - - - - 0.914 ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
90. ENSGALG00000001734 ENSGALG00000001734 408 0.909 - - - - - - - - - 0.909
91. GABRD ENSGALG00000001282 8 0.908 - - - - - - - - - 0.908 gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
92. PPIL6 ENSGALG00000015237 11 0.906 - - 0.906 - - - - - - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
93. CCNI2 ENSGALG00000023812 21 0.906 - - - - - - - - - 0.906 cyclin I family member 2, transcript variant X2
94. EPG5 ENSGALG00000036259 71 0.903 - - - - - - - - - 0.903 ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
95. HOGA1 ENSGALG00000006134 25 0.902 - - 0.902 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
96. PIK3C2G ENSGALG00000013117 53 0.895 - - - - - - - - - 0.895 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
97. FMN1 ENSGALG00000009723 100 0.894 - - - - - - - - - 0.894 formin 1 [Source:NCBI gene;Acc:386747]
98. RAB11FIP1 41 0.891 - - - - - - - - - 0.891 RAB11 family interacting protein 1, transcript variant X2
99. ZBTB6 ENSGALG00000021570 15 0.891 - - - - - - - - - 0.891 zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
100. E2F3 ENSGALG00000012680 21 0.891 - - - - - - - - - 0.891 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA