Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNORA53

Gene Name Gene ID Reads Annotation
SNORA53 SNORA53 10










Genes with expression patterns similar to SNORA53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. SNORA53 SNORA53 10 5 1.000 1.000 1.000 - 1.000 - - - 1.000
2. si:dkey-222o15.3 si:dkey-222o15.3 3 2 - - - - 1.000 - - - 1.000
3. plp1b ENSDARG00000011929 8 2 - - - - 1.000 - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
4. BX927253.1 ENSDARG00000096072 1 2 - - 1.000 - 1.000 - - - -
5. si:ch211-178j18.2 si:ch211-178j18.2 1 2 - - 1.000 - - - - - 1.000
6. sox32 ENSDARG00000100591 2 2 - - 1.000 - 1.000 - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
7. syne2a_1 0 2 - - 1.000 - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
8. asah2 ENSDARG00000012829 13 1.92 - 0.920 - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
9. pcdh2g12 5 1.914 0.914 - 1.000 - - - - - - protocadherin 2 gamma 12
10. zgc:174642_2 zgc:174642_2 1 1.904 - - 1.000 - 0.904 - - - -
11. fn3krp ENSDARG00000098208 4 1.867 - - 1.000 - - - - - 0.867 fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
12. CU550716.4 CU550716.4 14 1.781 0.914 - - - - - - - 0.867
13. CABZ01033205.2 CABZ01033205.2 5 1.746 - - - - 0.746 - - - 1.000
14. hsd17b1 ENSDARG00000027469 11 1.673 0.914 - - - 0.759 - - - - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
15. cart4 ENSDARG00000070142 55 1.567 - - 0.761 - 0.806 - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
16. rx3 ENSDARG00000052893 43 1.549 - - - - 0.838 - - - 0.711 retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
17. si:ch211-232m10.6 ENSDARG00000070931 2 1 - - - - 1.000 - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
18. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
19. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
20. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
21. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
22. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
23. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
24. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
25. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
26. SLC4A3 ENSDARG00000104005 2 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
27. tbc1d20 ENSDARG00000032298 1 1 - - - - 1.000 - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
28. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
29. DNAI1 DNAI1 11 1 - - - - 1.000 - - - -
30. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
31. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
32. chrna4 chrna4 3 1 - - 1.000 - - - - - -
33. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
34. NUGGC NUGGC 9 1 - - - - - - - - 1.000
35. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
36. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
37. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - 1.000 - - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
38. TRIM35 TRIM35 100 1 - - - - 1.000 - - - -
39. cd28 ENSDARG00000095070 0 1 - - - - - - - - 1.000 CD28 molecule [Source:ZFIN;Acc:ZDB-GENE-070912-128]
40. TMEM132A ENSDARG00000105005 4 1 - - - - 1.000 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
41. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
42. si:dkey-47k20.5 ENSDARG00000115763 0 1 - - - - 1.000 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
43. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - 1.000 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
44. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - 1.000 - - - -
45. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
46. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
47. BX569789.4 BX569789.4 3 1 - - - - 1.000 - - - -
48. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
49. ANO2 ENSDARG00000101363 1 1 - - 1.000 - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
50. BX000442.2 BX000442.2 8 1 - - - - - - - - 1.000
51. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
52. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
53. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
54. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
55. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -
56. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
57. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
58. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - - - - - 1.000
59. SNORD12_1 SNORD12_1 0 1 - - 1.000 - - - - - -
60. calhm1 ENSDARG00000077021 2 1 - - - - 1.000 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
61. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
62. sh2d4b sh2d4b 1 1 - - 1.000 - - - - - -
63. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - 1.000 - - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
64. tlr5a ENSDARG00000044415 3 1 - - - - 1.000 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
65. zgc:152658 ENSDARG00000018587, ENSDARG00000111314 2 1 - - - - 1.000 - - - - zgc:152658 [Source:ZFIN;Acc:ZDB-GENE-060929-68]
66. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
67. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
68. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1 - - - - 1.000 - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
69. si:ch211-229l10.11 ENSDARG00000101223 3 1 - - - - 1.000 - - - - si:ch211-229l10.11 [Source:ZFIN;Acc:ZDB-GENE-110913-131]
70. CABZ01065246.2 CABZ01065246.2 45 1 - - - - 1.000 - - - -
71. CABZ01088691.2 CABZ01088691.2 0 1 - - - - 1.000 - - - -
72. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
73. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
74. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
75. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
76. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
77. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
78. BX323450.2 BX323450.2 2 1 - - - - 1.000 - - - -
79. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
80. cabp7b ENSDARG00000060846 5 1 - - 1.000 - - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
81. BX901974.1 ENSDARG00000067592 2 1 - - - - 1.000 - - - -
82. SYCP2L 3 1 - - - - 1.000 - - - - synaptonemal complex protein 2-like, transcript variant X3
83. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
84. ighv8-3 ENSDARG00000114819 0 1 - - - - 1.000 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
85. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
86. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
87. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - 1.000 - - - -
88. Metazoa_SRP_26 Metazoa_SRP_26 0 1 - - - - 1.000 - - - -
89. avp ENSDARG00000058567 4 1 - - - - 1.000 - - - - arginine vasopressin [Source:ZFIN;Acc:ZDB-GENE-030407-2]
90. nup85 ENSDARG00000098679 2 1 - - 1.000 - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
91. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
92. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
93. PLA2G4C_2 PLA2G4C_2 10 1 - - - - 1.000 - - - -
94. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
95. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
96. U1_12 U1_12 0 1 - - - - 1.000 - - - -
97. U4_1 U4_1 2 1 - - 1.000 - - - - - -
98. CABZ01081656.1 CABZ01081656.1 14 1 - 1.000 - - - - - - -
99. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
100. scospondin ENSDARG00000067859 4 1 - - - - 1.000 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]

There are 1003 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA