Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNN

Gene Name Gene ID Reads Annotation
SNN ENSGALG00000028876 1687 stannin [Source:NCBI gene;Acc:416429]











Genes with expression patterns similar to SNN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNN ENSGALG00000028876 1687 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stannin [Source:NCBI gene;Acc:416429]
2. ATF7IP ENSGALG00000011814 1571 1.797 - - 0.950 - - - - - - 0.847 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
3. DNAJC24 ENSGALG00000012130 1882 1.796 - - 0.891 - - - - - - 0.905 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
4. ACOX1 ENSGALG00000002159 2953 1.782 - - 0.906 - - - - - - 0.876 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
5. KDM6A ENSGALG00000016217 2302 1.736 - - 0.908 - - - - - - 0.828 lysine demethylase 6A, transcript variant X14
6. GTF2H2 ENSGALG00000002399 2361 1.735 - - 0.959 - - - - - - 0.776 general transcription factor IIH subunit 2, transcript variant X2
7. SBNO1 ENSGALG00000003392 6731 1.721 - - 0.832 - - - - - - 0.889 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
8. IWS1 ENSGALG00000001803 2305 1.713 - - 0.820 - - - - - - 0.893 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
9. STAU1 ENSGALG00000004736 3828 1.684 - - 0.843 - - - - - - 0.841 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
10. YBX3 ENSGALG00000031890 819 1.683 - - 0.913 - - - - - - 0.770 Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
11. SUPV3L1 ENSGALG00000004197 4141 1.681 - - - - - - 0.746 - - 0.935 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
12. CEPT1 ENSGALG00000000142 4219 1.672 - - 0.805 - - - - - - 0.867 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
13. ZNF639 ENSGALG00000005944 6387 1.662 - - 0.932 - - - - - - 0.730 zinc finger protein 639 [Source:NCBI gene;Acc:425280]
14. MRPS5 ENSGALG00000008550 1707 1.657 - - 0.732 - - - - - - 0.925 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
15. NDUFC2 ENSGALG00000029172 26136 1.632 - - 0.866 - - - 0.766 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
16. TRAF3IP1 ENSGALG00000004236 7094 1.63 - - 0.925 - - - - 0.705 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
17. INTS8 ENSGALG00000037955 3349 1.586 - - - - - - - 0.703 - 0.883 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
18. LYPLA2 ENSGALG00000004002 3939 1.583 - - 0.851 - - - - - - 0.732 lysophospholipase II [Source:NCBI gene;Acc:419685]
19. WWC1 ENSGALG00000001826 4666 1.579 - - - - - - - 0.701 - 0.878 WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
20. TMEM167A ENSGALG00000027332 13862 1.579 - - 0.866 - - - 0.713 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
21. MAEA ENSGALG00000013310 13230 1.563 - - 0.793 - - - - 0.770 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
22. ENSGALG00000009863 ENSGALG00000009863 7375 1.562 - - 0.855 - - - 0.707 - - -
23. SPCS1 ENSGALG00000001655 7718 1.557 - - 0.837 - - - - 0.720 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
24. HIBADH ENSGALG00000033207 3540 1.556 - - - - - - 0.773 - - 0.783 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
25. GTF2H3 ENSGALG00000023682 9914 1.553 - - 0.796 - - - 0.757 - - - general transcription factor IIH subunit 3 [Source:NCBI gene;Acc:771837]
26. WDR12 ENSGALG00000008470 7654 1.552 - - 0.820 - - - - - - 0.732 WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
27. ISCA1 ENSGALG00000012606 10342 1.547 - - 0.822 - - - - - - 0.725 iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
28. TMEM175 ENSGALG00000015368 3342 1.545 - - 0.808 - - - - 0.737 - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
29. POMP ENSGALG00000017090 5504 1.531 - - 0.793 - - - - 0.738 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
30. CWC27 ENSGALG00000014747 8389 1.525 - - - - - - 0.788 0.737 - - CWC27 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:10664]
31. RSRC1 ENSGALG00000009669 5829 1.521 - - 0.737 - - - - 0.784 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
32. CSTF3 ENSGALG00000011685 4711 1.519 - - 0.792 - - - - - - 0.727 cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
33. PHF3 ENSGALG00000016267 4148 1.519 - - 0.775 - - - - 0.744 - - PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
34. GRAMD3 1685 1.516 - - - - - - 0.721 - - 0.795 GRAM domain containing 3, transcript variant X9
35. PRKACB ENSGALG00000028530 12506 1.498 - - 0.767 - - - - 0.731 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
36. PMPCB ENSGALG00000008280 6357 1.498 - - 0.781 - - - - - - 0.717 peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
37. SP4 ENSGALG00000039454 5597 1.487 - - 0.780 - - - - 0.707 - - Sp4 transcription factor [Source:HGNC Symbol;Acc:HGNC:11209]
38. DCUN1D1 ENSGALG00000008807 6545 1.483 - - 0.768 - - - 0.715 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
39. C11H16ORF80 C11H16ORF80 18673 1.48 - - - - - - 0.713 0.767 - -
40. GABARAPL2 ENSGALG00000003208 9195 1.48 - - 0.777 - - - 0.703 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
41. R3HDM1 ENSGALG00000012246 6580 1.461 - - - - - - 0.745 0.716 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
42. C1H12ORF73 ENSGALG00000030933 5195 1.441 - - - - - - 0.734 0.707 - - chromosome 1 open reading frame, human C12orf73 [Source:NCBI gene;Acc:772057]
43. DLD ENSGALG00000007931 11011 1.429 - - - - - - 0.726 - - 0.703 dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
44. WDR48 ENSGALG00000006052 3575 1.426 - - - - - - 0.704 0.722 - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
45. GPR114 GPR114 46 0.975 - - - - - - - - - 0.975
46. ENSGALG00000027621 ENSGALG00000027621 863 0.97 - - - - - - - - - 0.970
47. CENPJ ENSGALG00000017148 1415 0.966 - - - - - - - - - 0.966 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
48. STX6 3297 0.964 - - - - - - - - - 0.964 syntaxin 6
49. NFKBIE ENSGALG00000044525 633 0.964 - - - - - - - - - 0.964 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
50. ATP10D ENSGALG00000014192 94 0.964 - - 0.964 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
51. TRMT44 ENSGALG00000015594 1490 0.961 - - - - - - - - - 0.961 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
52. TTI1 ENSGALG00000006791 1218 0.961 - - - - - - - - - 0.961 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
53. AGMO ENSGALG00000010792 76 0.96 - - - - - - - - - 0.960 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
54. ADAMTS12 55 0.96 - - - - - - - - - 0.960 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
55. ATP2B2 ENSGALG00000030908 584 0.96 - - - - - - - - - 0.960 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
56. UBE3C ENSGALG00000006461 57 0.959 - - - - - - - - - 0.959 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
57. CNKSR3 ENSGALG00000027159 41 0.959 - - - - - - - - - 0.959 CNKSR family member 3, transcript variant X2
58. TM6SF2 ENSGALG00000029015 109 0.959 - - - - - - - - - 0.959 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
59. SOS2 ENSGALG00000012273 41 0.959 - - - - - - - - - 0.959 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
60. SMARCAD1 ENSGALG00000037339 149 0.959 - - 0.959 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
61. ENSGALG00000008594 ENSGALG00000008594 54 0.958 - - - - - - - - - 0.958
62. MAP3K8 ENSGALG00000007356 188 0.958 - - - - - - - - - 0.958 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
63. CLEC16A ENSGALG00000007167 66 0.957 - - 0.957 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
64. PCYT1B 190 0.957 - - 0.957 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
65. SOBP ENSGALG00000043047 147 0.956 - - 0.956 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
66. TRIM13 ENSGALG00000017011 92 0.956 - - 0.956 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
67. RALGDS ENSGALG00000003412 4478 0.956 - - 0.956 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
68. TFG ENSGALG00000015299 849 0.956 - - - - - - - - - 0.956 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
69. ENSGALG00000002020 ENSGALG00000002020 183 0.956 - - 0.956 - - - - - - -
70. BCOR ENSGALG00000016245 85 0.956 - - - - - - - - - 0.956 BCL6 corepressor, transcript variant X8
71. SZT2 ENSGALG00000028561 255 0.956 - - 0.956 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
72. SLC3A1 ENSGALG00000009973 608 0.955 - - 0.955 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
73. ENSGALG00000018358 ENSGALG00000018358 101 0.955 - - - - - - - - - 0.955
74. SLK ENSGALG00000008318 2220 0.955 - - 0.955 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
75. RGP1 ENSGALG00000002394 5937 0.955 - - - - - - - - - 0.955 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
76. ITGB4 ENSGALG00000002389 44 0.955 - - 0.955 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
77. ENSGALG00000004772 ENSGALG00000004772 173 0.955 - - - - - - - - - 0.955
78. UEVLD ENSGALG00000006342 164 0.955 - - 0.955 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
79. TDRD6 48 0.955 - - 0.955 - - - - - - - tudor domain containing 6
80. ENSGALG00000028964 ENSGALG00000028964 46 0.955 - - 0.955 - - - - - - -
81. CDC14B ENSGALG00000012627 110 0.955 - - 0.955 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
82. MRC2 ENSGALG00000000461 48 0.955 - - 0.955 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
83. ITM2B ENSGALG00000016996 1112 0.954 - - 0.954 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
84. RQCD1 RQCD1 110 0.954 - - 0.954 - - - - - - -
85. TCTN2 ENSGALG00000023683 3596 0.953 - - 0.953 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
86. DTX2 ENSGALG00000001905 1475 0.953 - - - - - - - - - 0.953 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
87. APTX ENSGALG00000001954 692 0.953 - - 0.953 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
88. ENSGALG00000020103 ENSGALG00000020103 64 0.953 - - 0.953 - - - - - - -
89. TNFRSF21 ENSGALG00000016719 2762 0.953 - - - - - - - - - 0.953 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
90. PTDSS2 ENSGALG00000004300 682 0.953 - - 0.953 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
91. NXPE3 ENSGALG00000015344 111 0.953 - - 0.953 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
92. OSGIN2 ENSGALG00000042840 83 0.953 - - 0.953 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
93. FOXP1 127 0.953 - - - - - - - - - 0.953 forkhead box P1, transcript variant X14
94. IFT81 ENSGALG00000003854 2534 0.952 - - 0.952 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
95. PTPRE ENSGALG00000009823 250 0.952 - - - - - - - - - 0.952 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
96. BBX ENSGALG00000015353 1281 0.952 - - 0.952 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
97. PCMTD2 ENSGALG00000005901 1833 0.952 - - - - - - - - - 0.952 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
98. MED12 ENSGALG00000036322 814 0.951 - - 0.951 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
99. VAV2 ENSGALG00000002699 503 0.951 - - - - - - - - - 0.951 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
100. ENSGALG00000004703 ENSGALG00000004703 112 0.951 - - 0.951 - - - - - - -

There are 912 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA