Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNIP1

Gene Name Gene ID Reads Annotation
SNIP1 ENSGALG00000002010 1429 Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]











Genes with expression patterns similar to SNIP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNIP1 ENSGALG00000002010 1429 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
2. IFNAR2 ENSGALG00000041867 1596 1.786 - - - - - - - 0.993 - 0.793 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
3. SBNO1 ENSGALG00000003392 6731 1.699 - - - - - - - 0.959 - 0.740 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
4. MLST8 ENSGALG00000005878 8116 1.509 - - - - - - - 0.739 - 0.770 MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
5. RNF168 ENSGALG00000006392 507 1 - - - - - - - 1.000 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
6. ATP2B4 ENSGALG00000003601 3746 1 - - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
7. ELAVL4 ENSGALG00000010533 4978 1 - - - - - - - 1.000 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
8. PDCD6IP ENSGALG00000033500 580 1 - - - - - - - 1.000 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
9. ENSGALG00000012250 ENSGALG00000012250 581 0.999 - - - - - - - 0.999 - -
10. PIGL ENSGALG00000004492 669 0.999 - - - - - - - 0.999 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
11. CRELD2 ENSGALG00000008551 2084 0.999 - - - - - - - 0.999 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
12. SLC35D1 ENSGALG00000011121 4456 0.999 - - - - - - - 0.999 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
13. SPDYA ENSGALG00000017392 503 0.999 - - - - - - - 0.999 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
14. ZNF319 ENSGALG00000000999 1272 0.999 - - - - - - - 0.999 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
15. FBF1 ENSGALG00000002179 1738 0.999 - - - - - - - 0.999 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
16. ALS2 ENSGALG00000008415 2576 0.998 - - - - - - - 0.998 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
17. RNFT1 ENSGALG00000005205 2888 0.998 - - - - - - - 0.998 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
18. NVL ENSGALG00000009322 5286 0.998 - - - - - - - 0.998 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
19. RAI2 ENSGALG00000016538 1074 0.998 - - - - - - - 0.998 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
20. RFT1 ENSGALG00000001945 2446 0.998 - - - - - - - 0.998 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
21. TMEM192 ENSGALG00000009528 2428 0.997 - - - - - - - 0.997 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
22. PMP22 ENSGALG00000031425 5358 0.997 - - - - - - - 0.997 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
23. C6ORF192 C6ORF192 4224 0.996 - - - - - - - 0.996 - -
24. MAP2K2 ENSGALG00000001267 3857 0.996 - - - - - - - 0.996 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
25. CENPL ENSGALG00000038411 4867 0.996 - - - - - - - 0.996 - - centromere protein L [Source:NCBI gene;Acc:426563]
26. ATE1 ENSGALG00000009502 3751 0.996 - - - - - - - 0.996 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
27. NBL1 ENSGALG00000040297 8165 0.995 - - - - - - - 0.995 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
28. FUNDC2 ENSGALG00000029585 9334 0.994 - - - - - - - 0.994 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
29. CETN1 ENSGALG00000026741 7243 0.994 - - - - - - - 0.994 - - centrin 1 [Source:NCBI gene;Acc:422668]
30. TMEM126A ENSGALG00000014066 6149 0.994 - - - - - - - 0.994 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
31. RCOR3 ENSGALG00000009871 7022 0.993 - - - - - - - 0.993 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
32. DLC1 ENSGALG00000013715 5297 0.992 - - - - - - - 0.992 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
33. TTL ENSGALG00000008614 3991 0.992 - - - - - - - 0.992 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
34. CDCA7 ENSGALG00000040833 7484 0.992 - - - - - - - 0.992 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
35. CRNKL1 ENSGALG00000008429 7280 0.991 - - - - - - - 0.991 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
36. YAF2 ENSGALG00000009540 8452 0.991 - - - - - - - 0.991 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
37. PPP3R1 ENSGALG00000023648 3417 0.991 - - - - - - - 0.991 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
38. PPM1D ENSGALG00000035610 6530 0.987 - - - - - - - 0.987 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
39. G3BP2 ENSGALG00000010882 21129 0.987 - - - - - - - 0.987 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
40. RBM7 ENSGALG00000007017 8779 0.986 - - - - - - - 0.986 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
41. PDHB ENSGALG00000029576 12254 0.984 - - - - - - - 0.984 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
42. gga-mir-6587 ENSGALG00000026386 9441 0.983 - - - - - - - 0.983 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
43. EXO1 ENSGALG00000010748 7572 0.982 - - - - - - - 0.982 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
44. JSC JSC 7982 0.977 - - - - - - - 0.977 - -
45. RFC3 ENSGALG00000017064 7011 0.972 - - - - - - - 0.972 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
46. KIAA0196 KIAA0196 4011 0.971 - - - - - - - 0.971 - -
47. XPO5 ENSGALG00000010341 24765 0.969 - - - - - - - 0.969 - - exportin 5 [Source:NCBI gene;Acc:421450]
48. NUP107 ENSGALG00000009934 2097 0.964 - - - - - - - 0.964 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
49. COX7A2L ENSGALG00000037996 13646 0.963 - - - - - - - 0.963 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
50. INPP5A ENSGALG00000010493 6769 0.962 - - - - - - - 0.962 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
51. GARS ENSGALG00000005694 18264 0.961 - - - - - - - 0.961 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
52. AP2B1 ENSGALG00000042125 13229 0.96 - - - - - - - 0.960 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
53. SFT2D1 ENSGALG00000020005 10855 0.958 - - - - - - - 0.958 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
54. ANKRD11 ENSGALG00000006222 12327 0.958 - - - - - - - 0.958 - - ankyrin repeat domain 11, transcript variant X2
55. TPD52 ENSGALG00000040167 9891 0.955 - - - - - - - 0.955 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
56. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
57. MRPL54 ENSGALG00000027611 39450 0.93 - - - - - - - 0.930 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
58. PRTG ENSGALG00000037336 34665 0.922 - - - - - - - 0.922 - - protogenin [Source:NCBI gene;Acc:415407]
59. PPA2 ENSGALG00000010582 22301 0.917 - - - - - - - 0.917 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
60. Sep-02_1 Sep-02_1 19203 0.915 - - - - - - - 0.915 - -
61. CHD4 ENSGALG00000013565 25695 0.91 - - - - - - - 0.910 - - chromodomain helicase DNA binding protein 4
62. ENSGALG00000017396 ENSGALG00000017396 9028 0.907 - - - - - - - 0.907 - -
63. ZOV3 ZOV3 3267 0.903 - - - - - - - 0.903 - -
64. FAM98A ENSGALG00000010428 9585 0.902 - - - - - - - 0.902 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
65. CDC42EP4 ENSGALG00000023364 9240 0.901 - - - - - - - 0.901 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
66. TNFAIP8L1 ENSGALG00000004266 12611 0.901 - - - - - - - 0.901 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
67. SLC25A39 ENSGALG00000042894 10654 0.9 - - - - - - - 0.900 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
68. LRPPRC ENSGALG00000009967 17091 0.877 - - - - - - - 0.877 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
69. ENSGALG00000023609 ENSGALG00000023609 6933 0.869 - - - - - - - 0.869 - -
70. ARIH2 ENSGALG00000006956 3692 0.869 - - - - - - - - - 0.869 ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:416061]
71. ARHGAP11A ENSGALG00000009731 6817 0.854 - - - - - - - - - 0.854 Rho GTPase activating protein 11A [Source:NCBI gene;Acc:423289]
72. ATP6V1G1 ENSGALG00000007190 82534 0.853 - - - - - - - 0.853 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
73. STAU1 ENSGALG00000004736 3828 0.851 - - - - - - - - - 0.851 staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
74. COQ6 ENSGALG00000010197 3283 0.847 - - - - - - - - - 0.847 coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
75. TCN2 3959 0.843 - - - - - - - - - 0.843 transcobalamin 2
76. ACOX1 ENSGALG00000002159 2953 0.839 - - - - - - - - - 0.839 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
77. HDAC4 ENSGALG00000004288 2124 0.837 - - - - - - - - - 0.837 histone deacetylase 4 [Source:NCBI gene;Acc:374207]
78. GTF2H5 ENSGALG00000013733 12293 0.835 - - - - - - - 0.835 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
79. TRIM3 ENSGALG00000034004 110 0.833 - - - - - - - - - 0.833 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
80. AGPAT6 AGPAT6 2564 0.833 - - - - - - - - - 0.833
81. CCBL2 CCBL2 184 0.831 - - - - - - - - - 0.831
82. PKDCCB ENSGALG00000011166 74 0.831 - - - - - - - - - 0.831 protein kinase domain containing, cytoplasmic b
83. SLC38A1 ENSGALG00000009698 566 0.83 - - - - - - - - - 0.830 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
84. ENSGALG00000001919 ENSGALG00000001919 531 0.829 - - - - - - - - - 0.829
85. TNFRSF1A ENSGALG00000039461 1569 0.828 - - - - - - - - - 0.828 TNF receptor superfamily member 1A [Source:NCBI gene;Acc:418325]
86. ATP2B2 ENSGALG00000030908 584 0.827 - - - - - - - - - 0.827 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
87. TRIM24 ENSGALG00000012823 2725 0.827 - - - - - - - - - 0.827 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
88. U2SURP ENSGALG00000002612 4255 0.825 - - - - - - - - - 0.825 U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
89. SERPINB6 ENSGALG00000012866 1582 0.825 - - - - - - - - - 0.825 serpin family B member 6 [Source:NCBI gene;Acc:420895]
90. TTI1 ENSGALG00000006791 1218 0.825 - - - - - - - - - 0.825 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
91. CAST ENSGALG00000014682 900 0.824 - - - - - - - - - 0.824 calpastatin [Source:NCBI gene;Acc:427121]
92. AGMO ENSGALG00000010792 76 0.824 - - - - - - - - - 0.824 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
93. PRICKLE1 ENSGALG00000009556 60 0.824 - - - - - - - - - 0.824 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
94. USP36 ENSGALG00000037018 783 0.824 - - - - - - - - - 0.824 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
95. ENSGALG00000004772 ENSGALG00000004772 173 0.823 - - - - - - - - - 0.823
96. ENSGALG00000018358 ENSGALG00000018358 101 0.822 - - - - - - - - - 0.822
97. AP3B2 2331 0.822 - - - - - - - - - 0.822 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
98. RASSF8 ENSGALG00000014041 850 0.822 - - - - - - - - - 0.822 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
99. OBFC1 OBFC1 1071 0.821 - - - - - - - - - 0.821
100. UBE3C ENSGALG00000006461 57 0.821 - - - - - - - - - 0.821 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]

There are 237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA