Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNED1

Gene Name Gene ID Reads Annotation
SNED1 ENSGALG00000043596 693 sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]











Genes with expression patterns similar to SNED1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNED1 ENSGALG00000043596 693 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
2. GALNT11 ENSGALG00000006233 210 1.598 - - 0.801 - 0.797 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
3. RIPK4 ENSGALG00000040189 102 1.497 - - 0.795 - - - - 0.702 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
4. SIL1 ENSGALG00000002457 147 1.493 - - 0.768 - - - - - - 0.725 SIL1 nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:24624]
5. PIK3R3 ENSGALG00000010335 374 1.462 - - - - 0.706 - - - - 0.756 phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
6. HEXDC ENSGALG00000039839 936 1.445 - - 0.742 - - - - - 0.703 - hexosaminidase D [Source:HGNC Symbol;Acc:HGNC:26307]
7. LY86 ENSGALG00000012801 865 0.911 - - - - - - - - 0.911 - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
8. PPFIBP2 ENSGALG00000005294 133 0.91 - - - - - - - - - 0.910 PPFIA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9250]
9. MBP ENSGALG00000013640 62 0.901 - - - - - - - 0.901 - - myelin basic protein [Source:NCBI gene;Acc:396217]
10. SLC7A6 ENSGALG00000029324 427 0.872 - - - - - - - - - 0.872 solute carrier family 7 member 6 [Source:HGNC Symbol;Acc:HGNC:11064]
11. PRUNE2 ENSGALG00000015167 37 0.866 - - - - - - - - 0.866 - prune homolog 2, transcript variant X5
12. PLXNB2 ENSGALG00000039861 338 0.861 - - 0.861 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
13. SPINK4 ENSGALG00000043964 50 0.861 - - - - - - - 0.861 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
14. TRDN ENSGALG00000014848 130 0.856 - - - - - - - - 0.856 - triadin
15. PKIB ENSGALG00000027036 1663 0.854 - - - - - - - - 0.854 - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
16. ELF1 ENSGALG00000016947 2769 0.85 - - - - - - - - 0.850 - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
17. NSUN5 ENSGALG00000000891 1356 0.846 - - - - - - - 0.846 - - NOP2/Sun RNA methyltransferase family member 5 [Source:HGNC Symbol;Acc:HGNC:16385]
18. UTP6 ENSGALG00000003260 4909 0.845 - - - - - - - - - 0.845 UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
19. BMP2K ENSGALG00000010885 37 0.843 - - 0.843 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
20. CCNY ENSGALG00000007076 3921 0.838 - - - - - - - - - 0.838 cyclin Y [Source:HGNC Symbol;Acc:HGNC:23354]
21. EPHA1 ENSGALG00000014687 174 0.834 - - 0.834 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
22. RAB11FIP1 41 0.833 - - 0.833 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
23. DIAPH1 DIAPH1 357 0.832 - - - - - - - - - 0.832
24. TOX3 ENSGALG00000034649 54 0.828 - - 0.828 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
25. DLX6 ENSGALG00000023195 29 0.827 - - 0.827 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
26. BERT BERT 283 0.826 - - - - - - - - 0.826 -
27. FAT4 ENSGALG00000011823 774 0.825 - - - - - - - - - 0.825 FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
28. ISG12(2) ISG12(2) 146 0.82 - - - - - - - - 0.820 -
29. DARS2 ENSGALG00000023749 2386 0.819 - - - - - - - - - 0.819 aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
30. PIP5K1C ENSGALG00000000784 492 0.819 - - 0.819 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
31. MMRN1 ENSGALG00000010391 997 0.819 - - - - - - - - - 0.819 multimerin 1 [Source:HGNC Symbol;Acc:HGNC:7178]
32. ARHGEF3 ENSGALG00000005481 683 0.819 - - - - - - - - - 0.819 Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
33. EML5 ENSGALG00000010639 25 0.815 - - 0.815 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
34. PIEZO2 ENSGALG00000042134 323 0.815 - - - - - - - - - 0.815 piezo type mechanosensitive ion channel component 2, transcript variant X7
35. PRODH ENSGALG00000007728 1659 0.814 - - - - - - - - - 0.814 proline dehydrogenase 1
36. WNT5A ENSGALG00000034168 10160 0.814 - - - - - - - - - 0.814 Wnt family member 5A [Source:NCBI gene;Acc:395703]
37. AHR2 ENSGALG00000023742 21 0.813 - - 0.813 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
38. CCDC18 ENSGALG00000005889 628 0.813 - - 0.813 - - - - - - - coiled-coil domain containing 18 [Source:NCBI gene;Acc:424497]
39. CD300A CD300A 173 0.813 - - 0.813 - - - - - - -
40. ACSF3 ENSGALG00000035225 261 0.813 - - 0.813 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
41. MMRN2 770 0.812 - - - - - - - - 0.812 - multimerin 2, transcript variant X1
42. PRC1 ENSGALG00000012836 20 0.812 - - 0.812 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
43. CRY2 ENSGALG00000008436 1732 0.81 - - - - - - - - - 0.810 cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
44. ALKBH8 ENSGALG00000017170 699 0.81 - - 0.810 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
45. SCN5A ENSGALG00000006112 137 0.809 - - 0.809 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
46. LLGL1 ENSGALG00000014408 15 0.809 - - 0.809 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
47. ATXN3 ENSGALG00000010766 48 0.809 - - 0.809 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
48. PLEKHA1 ENSGALG00000034548 34 0.808 - - - - - - - - - 0.808 pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
49. C15orf60 C15orf60 16 0.808 - - 0.808 - - - - - - -
50. GABRA1 ENSGALG00000001698 120 0.808 - - 0.808 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
51. ZCCHC8 ENSGALG00000004486 3201 0.808 - - - - - - - - - 0.808 zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
52. DNALI1 ENSGALG00000001996 64 0.807 - - 0.807 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
53. PSMD13 ENSGALG00000043684 14720 0.807 - - - - - - - - - 0.807 proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
54. FAM46A ENSGALG00000035903 891 0.806 - - 0.806 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
55. PHTF2 ENSGALG00000008335 722 0.806 - - 0.806 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
56. ARPC1B ENSGALG00000032588 2407 0.804 - - - - - - - - 0.804 - actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
57. DFFB ENSGALG00000036295 88 0.804 - - 0.804 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
58. CREB3 ENSGALG00000002523 23 0.803 - - 0.803 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
59. PDZK1IP1 ENSGALG00000010473 551 0.803 - - 0.803 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
60. DVL3 ENSGALG00000008414 38 0.802 - - 0.802 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
61. SCNM1 ENSGALG00000046607 665 0.802 - - 0.802 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
62. CCP110 ENSGALG00000006925 59 0.801 - - - - - - - - - 0.801 centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
63. OTOA ENSGALG00000007070 94 0.8 - - 0.800 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
64. APH1A ENSGALG00000045163 146 0.8 - - 0.800 - - - - - - - aph-1 homolog A, gamma-secretase subunit [Source:HGNC Symbol;Acc:HGNC:29509]
65. ENSGALG00000005723 ENSGALG00000005723 36 0.799 - - 0.799 - - - - - - -
66. FAM199X ENSGALG00000008872 44 0.798 - - 0.798 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
67. MST1 ENSGALG00000002722 994 0.797 - - 0.797 - - - - - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
68. FAM132A 808 0.796 - - - - - - - - 0.796 - family with sequence similarity 132 member A, transcript variant X2
69. ENSGALG00000028778 ENSGALG00000028778 47 0.796 - - 0.796 - - - - - - -
70. LANCL3 ENSGALG00000016265 9 0.796 - - - - - - - - - 0.796 LanC like 3 [Source:HGNC Symbol;Acc:HGNC:24767]
71. KPNA5 ENSGALG00000014937 28 0.796 - - 0.796 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
72. S1PR1 ENSGALG00000005208 12 0.796 - - - - - - - - - 0.796 sphingosine-1-phosphate receptor 1 [Source:HGNC Symbol;Acc:HGNC:3165]
73. PAG1 ENSGALG00000034188 9 0.795 - - - - - - - - - 0.795 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:HGNC Symbol;Acc:HGNC:30043]
74. TPCN2 ENSGALG00000007550 10 0.795 - - - - - - - - - 0.795 two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
75. FAM3B ENSGALG00000016140 111 0.794 - - 0.794 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
76. LPGAT1 ENSGALG00000009848 33 0.794 - - - - - - - - - 0.794 lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
77. WDR63 ENSGALG00000008696 15 0.793 - - - - - - - - - 0.793 WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
78. FSCN2 ENSGALG00000023354 13 0.793 - - 0.793 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
79. MST4 MST4 1931 0.792 - - 0.792 - - - - - - -
80. MAFB ENSGALG00000003670 834 0.792 - - - - - - - - 0.792 - MAF bZIP transcription factor B [Source:NCBI gene;Acc:419173]
81. AKAP2 ENSGALG00000015656 4310 0.792 - - - - - - - - 0.792 - A kinase (PRKA) anchor protein 2 [Source:NCBI gene;Acc:100533110]
82. HERPUD1 ENSGALG00000001220 18 0.792 - - - - - - - - - 0.792 homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
83. SEC22C ENSGALG00000005268 1151 0.791 - - 0.791 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
84. APBA1 ENSGALG00000015111 261 0.791 - - - - - - - - - 0.791 amyloid beta precursor protein binding family A member 1 [Source:HGNC Symbol;Acc:HGNC:578]
85. MRVI1 ENSGALG00000005632 450 0.791 - - - - - - - - - 0.791 murine retrovirus integration site 1 homolog [Source:HGNC Symbol;Acc:HGNC:7237]
86. ANO6 ENSGALG00000009638 470 0.791 - - - - - - - - - 0.791 anoctamin 6 [Source:HGNC Symbol;Acc:HGNC:25240]
87. VTI1B ENSGALG00000009526 133 0.789 - - 0.789 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
88. GGCT ENSGALG00000030552 3446 0.789 - - 0.789 - - - - - - - gamma-glutamylcyclotransferase
89. FANCA ENSGALG00000000516 250 0.788 - - - - - - - - - 0.788 Fanconi anemia complementation group A [Source:NCBI gene;Acc:415854]
90. gga-mir-6561 ENSGALG00000026650 135 0.788 - - 0.788 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
91. LONRF2 ENSGALG00000016768 193 0.787 - - - - - - - - - 0.787 LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
92. CSMD3 ENSGALG00000031578 23 0.787 - - - - - - - - - 0.787 CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
93. CREB1 ENSGALG00000008494 2219 0.787 - - - - - - - - - 0.787 cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
94. DNAAF1 ENSGALG00000003258 115 0.787 - - - - - - - - - 0.787 dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
95. TBC1D8B ENSGALG00000009040 75 0.786 - - 0.786 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
96. EHD4 ENSGALG00000008950 22 0.786 - - - - - - - - - 0.786 EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
97. AKAP10 ENSGALG00000004679 103 0.785 - - - - - - - - - 0.785 A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
98. NHLRC2 ENSGALG00000008946 387 0.785 - - 0.785 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
99. LDHD ENSGALG00000023828 60 0.784 - - - - - - - - - 0.784 lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
100. ADA ENSGALG00000004170 633 0.784 - - - - - - - - 0.784 - adenosine deaminase [Source:NCBI gene;Acc:419194]

There are 227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA