Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNCB

Gene Name Gene ID Reads Annotation
SNCB ENSGALG00000021542 19 synuclein beta [Source:NCBI gene;Acc:395391]











Genes with expression patterns similar to SNCB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNCB ENSGALG00000021542 19 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000 synuclein beta [Source:NCBI gene;Acc:395391]
2. MAP2K1 ENSGALG00000007687 250 1.787 - - - 0.787 - - 1.000 - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
3. CRISPLD1 ENSGALG00000033880 64 1.614 - - - - - - 0.785 0.829 - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
4. CD109 ENSGALG00000015910 11 1.566 - - - - 0.737 - - 0.829 - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
5. SLC24A3 ENSGALG00000008445 8 1.548 - - - 0.770 - - - - - 0.778 solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]
6. MYNN ENSGALG00000009409 11 1 - - - - - - 1.000 - - - myoneurin [Source:HGNC Symbol;Acc:HGNC:14955]
7. SEMA4D ENSGALG00000010697 10 1 - - - - - - 1.000 - - - semaphorin 4D [Source:NCBI gene;Acc:396331]
8. ENSGALG00000026418 ENSGALG00000026418 2 1 - - - - - - 1.000 - - -
9. PI15 ENSGALG00000029264 21 1 - - - - - - 1.000 - - - peptidase inhibitor 15 [Source:NCBI gene;Acc:374241]
10. CLCNKB ENSGALG00000003713 27 1 - - - - - - 1.000 - - - chloride voltage-gated channel Kb, transcript variant X3
11. SLC44A1 ENSGALG00000015439 32 1 - - - - - - 1.000 - - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
12. uc_6 uc_6 14 1 - - - - - - 1.000 - - -
13. KIAA1377 KIAA1377 48 1 - - - - - - 1.000 - - -
14. PIK3R4 ENSGALG00000040917 10 1 - - - - - - 1.000 - - - phosphoinositide-3-kinase regulatory subunit 4 [Source:HGNC Symbol;Acc:HGNC:8982]
15. LOC422320 ENSGALG00000007703 6 1 - - - - - - 1.000 - - - ligand of Numb protein X 2-like, transcript variant X1
16. DRG11 DRG11 32 1 - - - - - - 1.000 - - -
17. STRADB ENSGALG00000008373 10 1 - - - - - - 1.000 - - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
18. PLCZ1 ENSGALG00000013123 3 1 - - - - - - 1.000 - - - phospholipase C zeta 1 [Source:NCBI gene;Acc:418182]
19. PAPPA ENSGALG00000007079 6 1 - - - - - - 1.000 - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
20. PFKFB4 ENSGALG00000002099, ENSGALG00000032385 30 1 - - - - - - 1.000 - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 [Source:HGNC Symbol;Acc:HGNC:8875]
21. PCDHA11 58 1 - - - - - - 1.000 - - - protocadherin alpha 11
22. HOXB13 ENSGALG00000033154 71 1 - - - - - - 1.000 - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
23. CNKSR3 ENSGALG00000027159 41 1 - - - - - - 1.000 - - - CNKSR family member 3, transcript variant X2
24. ZDHHC15 ENSGALG00000007800 24 1 - - - - - - - 1.000 - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
25. FAM83H ENSGALG00000033118 50 1 - - - - - - 1.000 - - - family with sequence similarity 83 member H [Source:HGNC Symbol;Acc:HGNC:24797]
26. CDH20 ENSGALG00000012906 2 1 - - - - - - 1.000 - - - cadherin 20, type 2 [Source:NCBI gene;Acc:373927]
27. BROX ENSGALG00000009413 15 1 - - - - - - 1.000 - - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
28. C2CD3 ENSGALG00000017314 13 1 - - - - - - 1.000 - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
29. PTPRD ENSGALG00000015058 37 1 - - - - - - 1.000 - - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
30. RGS13 ENSGALG00000026810 8 1 - - - - - - 1.000 - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
31. DMB1 ENSGALG00000000162 7 1 - - - - - - 1.000 - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
32. TUSC5 15 1 - - - - - - 1.000 - - - tumor suppressor candidate 5
33. DSG2 ENSGALG00000015142 67 1 - - - - - - 1.000 - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
34. GABARAPL3 GABARAPL3 32 1 - - - - - - 1.000 - - -
35. GRHL3 ENSGALG00000004249 1 1 - - - - - - 1.000 - - - grainyhead like transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:25839]
36. MIER3 ENSGALG00000014721 57 1 - - - - - - 1.000 - - - MIER family member 3, transcript variant X6
37. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - 1.000 - - -
38. STEAP4 ENSGALG00000008997 8 1 - - - - - - 1.000 - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
39. SULT1B ENSGALG00000023122 7 1 - - - - - - 1.000 - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
40. ANKS1A ENSGALG00000002723 3 0.925 - - - - 0.925 - - - - - ankyrin repeat and sterile alpha motif domain containing 1A [Source:HGNC Symbol;Acc:HGNC:20961]
41. CD40 ENSGALG00000007015 7 0.925 - - - - 0.925 - - - - - CD40 molecule [Source:NCBI gene;Acc:395385]
42. AXDND1 ENSGALG00000004173 3 0.925 - - - - 0.925 - - - - - axonemal dynein light chain domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26564]
43. ZNF131 ENSGALG00000033435 56 0.925 - - - - 0.925 - - - - - zinc finger protein 131, transcript variant X1
44. gga-mir-6569 ENSGALG00000026551 10 0.925 - - - - 0.925 - - - - - gga-mir-6569 [Source:miRBase;Acc:MI0022387]
45. ENSGALG00000012389 ENSGALG00000012389 6 0.925 - - - - 0.925 - - - - -
46. POMGNT1 ENSGALG00000010351 3 0.925 - - - - 0.925 - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
47. NSUN6 ENSGALG00000008564 9 0.925 - - - - 0.925 - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
48. PNP ENSGALG00000044146 2 0.925 - - - - 0.925 - - - - - purine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]
49. TNN ENSGALG00000004538 21 0.925 - - - - 0.925 - - - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
50. SPATA6 ENSGALG00000010502 16 0.925 - - - - 0.925 - - - - - spermatogenesis associated 6 [Source:HGNC Symbol;Acc:HGNC:18309]
51. SUPT7L ENSGALG00000010048 8 0.925 - - - - 0.925 - - - - - SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]
52. ENSGALG00000027367 ENSGALG00000027367 7 0.925 - - - - 0.925 - - - - -
53. TXK ENSGALG00000014127 6 0.925 - - - - 0.925 - - - - - TXK tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12434]
54. ENSGALG00000003140 ENSGALG00000003140 1 0.925 - - - - 0.925 - - - - -
55. TG ENSGALG00000039509 19 0.925 - - - - 0.925 - - - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
56. ACOT1L ENSGALG00000008752 6 0.925 - - - - 0.925 - - - - - acyl-CoA thioesterase 1-like
57. AVP ENSGALG00000014117 19 0.925 - - - - 0.925 - - - - - arginine vasopressin [Source:NCBI gene;Acc:396101]
58. AIG1 ENSGALG00000013780 27 0.925 - - - - 0.925 - - - - - androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:21607]
59. MYOM1 ENSGALG00000014847 105 0.89 - - - - - - - 0.890 - - myomesin 1 [Source:NCBI gene;Acc:395805]
60. GRB2 ENSGALG00000008016 216 0.872 - - - - - - 0.872 - - - growth factor receptor bound protein 2 [Source:NCBI gene;Acc:386572]
61. SLC12A3 ENSGALG00000002957 28 0.866 - - - - - - - 0.866 - - solute carrier family 12 member 3 [Source:HGNC Symbol;Acc:HGNC:10912]
62. LOXL1 ENSGALG00000028247 672 0.86 - - - - 0.860 - - - - - lysyl oxidase like 1
63. ENSGALG00000003440 ENSGALG00000003440 42 0.858 - - - - - - 0.858 - - -
64. IL-12B IL-12B 14 0.858 - - - - - - 0.858 - - -
65. AOAH ENSGALG00000035505 6 0.856 - - - 0.856 - - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
66. ANTXRL ENSGALG00000005969 230 0.848 - - - - - - 0.848 - - - anthrax toxin receptor-like
67. VPS29L ENSGALG00000005951 31 0.848 - - - - - - 0.848 - - - VPS29 retromer complex component-like [Source:NCBI gene;Acc:416931]
68. FOXK1 ENSGALG00000004460 1483 0.847 - - - - - 0.847 - - - - forkhead box K1 [Source:HGNC Symbol;Acc:HGNC:23480]
69. BLK ENSGALG00000016661 68 0.844 - - - - - - 0.844 - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
70. TMEM161B ENSGALG00000010896 36 0.829 - - - - - - - 0.829 - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
71. SLC26A2 ENSGALG00000001239 3 0.829 - - - - - - - 0.829 - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
72. AMZ1 ENSGALG00000004358 2 0.829 - - - - - - - 0.829 - - archaelysin family metallopeptidase 1
73. IQSEC1 ENSGALG00000005042 24 0.829 - - - - - - - 0.829 - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
74. GFM2 ENSGALG00000014939 26 0.829 - - - - - - - 0.829 - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
75. SNORD74 SNORD74 0 0.829 - - - - - - - 0.829 - -
76. TLDC2 ENSGALG00000029033 6 0.829 - - - - - - - 0.829 - - TBC/LysM-associated domain containing 2, transcript variant X2
77. OCM ENSGALG00000003462 6 0.829 - - - - - - - 0.829 - - oncomodulin [Source:NCBI gene;Acc:386586]
78. FAM46C 13 0.829 - - - - - - - 0.829 - - family with sequence similarity 46 member C
79. ATP13A4 ENSGALG00000020827 0 0.829 - - - - - - - 0.829 - - ATPase 13A4 [Source:NCBI gene;Acc:424901]
80. FAM83C ENSGALG00000031906 1 0.829 - - - - - - - 0.829 - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
81. GALR GALR 17 0.829 - - - - - - - 0.829 - -
82. TRDN ENSGALG00000014848 130 0.829 - - - - - - - 0.829 - - triadin
83. SNORA33 SNORA33 11 0.829 - - - - - - - 0.829 - -
84. ENSGALG00000011933 ENSGALG00000011933 1 0.829 - - - - - - - 0.829 - -
85. CCDC13 ENSGALG00000005303 13 0.829 - - - - - - - 0.829 - - coiled-coil domain containing 13, transcript variant X3
86. PNMT ENSGALG00000027281 14 0.829 - - - - - - - 0.829 - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
87. SMOX ENSGALG00000015977 18 0.829 - - - - - - - 0.829 - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
88. ENSGALG00000018431 ENSGALG00000018431 2 0.829 - - - - - - - 0.829 - -
89. CDKN1AL ENSGALG00000026896 0 0.829 - - - - - - - 0.829 - - cyclin dependent kinase inhibitor 1A-like, transcript variant X5
90. RNP ENSGALG00000028991 10 0.829 - - - - - - - 0.829 - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
91. TNNC2 ENSGALG00000006835 2963 0.829 - - - - - - - 0.829 - - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
92. TLR15 ENSGALG00000008166 29 0.829 - - - - - - - 0.829 - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
93. PTPRF ENSGALG00000010053 27 0.829 - - - - - - - 0.829 - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
94. UNC5D ENSGALG00000001608 4 0.829 - - - - - - - 0.829 - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
95. GKN2 ENSGALG00000039187 173 0.829 - - - - - - - 0.829 - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
96. VSX2 ENSGALG00000033517 30 0.826 - - - - - - - - - 0.826 visual system homeobox 2 [Source:NCBI gene;Acc:395536]
97. CCK1R CCK1R 7 0.824 - - - - - - 0.824 - - -
98. SLC24A2 ENSGALG00000015080 54 0.816 - - - - - - - 0.816 - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
99. CRK ENSGALG00000002656 15 0.816 - - - - - - - 0.816 - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
100. CCDC180 109 0.816 - - - - - - - 0.816 - - coiled-coil domain containing 180

There are 146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA