Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNCA

Gene Name Gene ID Reads Annotation
SNCA ENSGALG00000010379 160 synuclein alpha [Source:NCBI gene;Acc:395393]











Genes with expression patterns similar to SNCA

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNCA ENSGALG00000010379 160 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 synuclein alpha [Source:NCBI gene;Acc:395393]
2. MALL ENSGALG00000023882 241 1.562 - - - - - - - 0.750 - 0.812 mal, T-cell differentiation protein like [Source:NCBI gene;Acc:421222]
3. SNTG2 ENSGALG00000016367 42 0.916 - - - - - - - - - 0.916 syntrophin gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
4. IKBIP ENSGALG00000026284 31 0.886 - - - - - - - - - 0.886 IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
5. NRG2 ENSGALG00000033641 61 0.884 - - - - - - - - - 0.884 neuregulin 2 [Source:HGNC Symbol;Acc:HGNC:7998]
6. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.884 - - - - - - - - - 0.884 pseudouridylate synthase-like 1, transcript variant X8
7. FIGNL1 ENSGALG00000026363 2194 0.883 - - - - - - - - - 0.883 fidgetin like 1, transcript variant X2
8. EFNA5 ENSGALG00000000280 308 0.881 - - - - - - - - - 0.881 ephrin A5 [Source:NCBI gene;Acc:396100]
9. PNMT ENSGALG00000027281 14 0.881 - - - - - - - - - 0.881 phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
10. ENSGALG00000016601 ENSGALG00000016601 16 0.881 - - - - - - - - - 0.881
11. CCR4 ENSGALG00000039146 20 0.878 - - - - - - - - - 0.878 C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
12. ARL15 ENSGALG00000014911 13 0.878 - - - - - - - - - 0.878 ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
13. NAGPA 5 0.878 - - - - - - - - - 0.878 N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, transcript variant X5
14. TRH ENSGALG00000008490 16 0.878 - - - - - - - - - 0.878 thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
15. DRAM1 ENSGALG00000012761 53 0.878 - - - - - - - - - 0.878 DNA damage regulated autophagy modulator 1 [Source:HGNC Symbol;Acc:HGNC:25645]
16. SIDT1 ENSGALG00000014812 20 0.878 - - - - - - - - - 0.878 SID1 transmembrane family member 1 [Source:HGNC Symbol;Acc:HGNC:25967]
17. DSTYK ENSGALG00000041123 12 0.878 - - - - - - - - - 0.878 dual serine/threonine and tyrosine protein kinase [Source:NCBI gene;Acc:395171]
18. PSTPIP1 ENSGALG00000002786 9 0.878 - - - - - - - - - 0.878 proline-serine-threonine phosphatase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9580]
19. CNTNAP4 ENSGALG00000023179 13 0.878 - - - - - - - - - 0.878 contactin associated protein like 4
20. PCDH12 ENSGALG00000002544 36 0.873 - - - - - - - - - 0.873 protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
21. DPYS ENSGALG00000039011 54 0.872 - - - - - - - - - 0.872 dihydropyrimidinase [Source:NCBI gene;Acc:420266]
22. FBXL4 ENSGALG00000015490 12 0.871 - - - - - - - - - 0.871 F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
23. CXorf30 CXorf30 172 0.871 - - - - - - - - - 0.871
24. ENSGALG00000020700 ENSGALG00000020700 44 0.869 - - - - - - - - - 0.869
25. MUC6 ENSGALG00000040530 11 0.868 - - - - - - - - - 0.868 mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
26. DRD2 ENSGALG00000007794 399 0.868 - - - - - - - - - 0.868 dopamine receptor D2 [Source:NCBI gene;Acc:428252]
27. MOCS1 ENSGALG00000010051 70 0.866 - - - - - - - - - 0.866 molybdenum cofactor synthesis 1 [Source:HGNC Symbol;Acc:HGNC:7190]
28. PRPS2 ENSGALG00000016592 165 0.865 - - - - - - - - - 0.865 phosphoribosyl pyrophosphate synthetase 2 [Source:NCBI gene;Acc:418639]
29. TLR5 ENSGALG00000009392 28 0.865 - - - - - - - - - 0.865 toll like receptor 5 [Source:NCBI gene;Acc:554217]
30. ENSGALG00000026925 ENSGALG00000026925 119 0.865 - - - - - - - - - 0.865
31. ZDHHC20 ENSGALG00000017126 58 0.861 - - - - - - - - - 0.861 zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
32. ISOC1 ENSGALG00000000161 46 0.86 - - - - - - - - - 0.860 isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
33. SAPCD2 12 0.858 - - - - - - - - - 0.858 suppressor APC domain containing 2, transcript variant X1
34. SH3RF1 ENSGALG00000009692 46 0.857 - - - - - - - - - 0.857 SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
35. KHDRBS3 ENSGALG00000031519 501 0.85 - - - - - - - - - 0.850 KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
36. RAB2A ENSGALG00000015450 990 0.845 - - - - - - - - - 0.845 RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
37. DPP10 ENSGALG00000012156 20 0.844 - - - - - - - - - 0.844 dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
38. ATHL1 ATHL1 16 0.843 - - - - - - - - - 0.843
39. ENSGALG00000007525 ENSGALG00000007525 48 0.843 - - - - - - - - - 0.843
40. AZI2 ENSGALG00000011428 24 0.84 - - - - - - - - - 0.840 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:HGNC:24002]
41. ENSGALG00000002020 ENSGALG00000002020 183 0.836 - - - - - - - - - 0.836
42. SLC6A6 ENSGALG00000006425 31 0.836 - - - - - - - - - 0.836 solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
43. S100A4 ENSGALG00000037599 280 0.835 - - - - - - - - - 0.835 S100 calcium binding protein A4
44. GRAMD1C ENSGALG00000035629 2494 0.834 - - - - - - - - - 0.834 GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
45. C11orf30 C11orf30 573 0.83 - - - - - - - 0.830 - -
46. MYOF ENSGALG00000006705 793 0.829 - - - - - - - - - 0.829 myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
47. EFCC1 ENSGALG00000005024 51 0.824 - - - - - - - - - 0.824 EF-hand and coiled-coil domain containing 1, transcript variant X6
48. UEVLD ENSGALG00000006342 164 0.821 - - - - - - - - - 0.821 UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
49. RAB3B ENSGALG00000010567 894 0.82 - - - - - - - - - 0.820 RAB3B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9778]
50. C5 ENSGALG00000001565 142 0.819 - - - - - - - - - 0.819 complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
51. MOCOS ENSGALG00000013149 25 0.817 - - - - - - - - - 0.817 molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
52. TRERF1 ENSGALG00000009896 42 0.816 - - - - - - - - - 0.816 transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
53. RFXAP ENSGALG00000019087 37 0.814 - - - - - - - - - 0.814 regulatory factor X associated protein [Source:HGNC Symbol;Acc:HGNC:9988]
54. IFT80 ENSGALG00000009559 57 0.813 - - - - - - - - - 0.813 intraflagellar transport 80 [Source:HGNC Symbol;Acc:HGNC:29262]
55. GET4 ENSGALG00000003798 158 0.813 - - - - - - - - - 0.813 golgi to ER traffic protein 4 [Source:NCBI gene;Acc:416450]
56. QSOX1 ENSGALG00000003933 184 0.812 - - - - - - - - - 0.812 quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
57. CHST8 ENSGALG00000004903 16 0.809 - - 0.809 - - - - - - - carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]
58. NFKBIA ENSGALG00000027864 1158 0.809 - - - - - - - - - 0.809 NFKB inhibitor alpha [Source:NCBI gene;Acc:396093]
59. EXTL2 ENSGALG00000027984 808 0.809 - - - - - - - - - 0.809 exostosin like glycosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:3516]
60. LONP1 ENSGALG00000040492 7133 0.805 - - - - - - - - - 0.805 lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
61. TEX11 ENSGALG00000005775 58 0.801 - - - - - - - - - 0.801 testis expressed 11 [Source:HGNC Symbol;Acc:HGNC:11733]
62. NCALD ENSGALG00000032518 42 0.798 - - - - - - - - - 0.798 neurocalcin delta [Source:NCBI gene;Acc:396048]
63. RGS18 ENSGALG00000021143 120 0.793 - - - - - 0.793 - - - - regulator of G-protein signaling 18 [Source:NCBI gene;Acc:424361]
64. RNASET2 ENSGALG00000011426 40 0.793 - - - - - - - - - 0.793 ribonuclease T2 [Source:NCBI gene;Acc:421569]
65. PCSK1 ENSGALG00000014681 73 0.792 - - - - - - - - - 0.792 proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]
66. GPR137B ENSGALG00000010843 69 0.792 - - - - - - - 0.792 - - G protein-coupled receptor 137B [Source:NCBI gene;Acc:421511]
67. CDHR3 ENSGALG00000008109 71 0.785 - - - - - - - - - 0.785 cadherin related family member 3 [Source:HGNC Symbol;Acc:HGNC:26308]
68. TAC1 ENSGALG00000009737 2211 0.783 - - - - - 0.783 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
69. RHOC ENSGALG00000001569 53 0.781 - - - - - - - 0.781 - - ras homolog family member C [Source:NCBI gene;Acc:395869]
70. RPAP2 ENSGALG00000005953 2085 0.779 - - - - - - - - - 0.779 RNA polymerase II associated protein 2 [Source:HGNC Symbol;Acc:HGNC:25791]
71. B3GNT7 ENSGALG00000007701 929 0.779 - - - - - 0.779 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
72. ACAN ENSGALG00000006725 184 0.778 - - - - - 0.778 - - - - aggrecan [Source:NCBI gene;Acc:395798]
73. CCL17 ENSGALG00000024466 10 0.778 - - - - - 0.778 - - - - C-C motif chemokine ligand 17 [Source:NCBI gene;Acc:415652]
74. SPINK5 SPINK5 195 0.777 - - - - - 0.777 - - - -
75. PPM1G ENSGALG00000016513 1544 0.775 - - - - - - - - - 0.775 protein phosphatase, Mg2+/Mn2+ dependent 1G [Source:HGNC Symbol;Acc:HGNC:9278]
76. CCNH ENSGALG00000015641 8051 0.774 - - - - - - - - - 0.774 cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
77. SNTB2 ENSGALG00000027482 44 0.774 - - - - - - - - - 0.774 syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
78. KLHL22 ENSGALG00000006422 132 0.774 - - - - - - - - - 0.774 kelch like family member 22, transcript variant X2
79. C9H2ORF82 ENSGALG00000040264 4201 0.773 - - - - - 0.773 - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
80. TAB3 ENSGALG00000016284 40 0.77 - - - - - - - - - 0.770 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30681]
81. STXBP1 ENSGALG00000040003 157 0.768 - - - - - - - - - 0.768 syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
82. TIMP3 ENSGALG00000028627 8706 0.767 - - - - - 0.767 - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
83. KHDRBS2 ENSGALG00000016276 110 0.767 - - - - - - - - - 0.767 KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
84. COL9A1 ENSGALG00000015970 3788 0.766 - - - - - 0.766 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
85. ENSGALG00000000346 ENSGALG00000000346 130 0.764 - - - - - - - - - 0.764
86. CD2 4 0.763 - - 0.763 - - - - - - - CD2 molecule, transcript variant X2
87. ENSGALG00000020877 ENSGALG00000020877 36 0.763 - - - - - - - - - 0.763
88. DNAI2 ENSGALG00000004495 45 0.759 - - - - - - - - - 0.759 dynein axonemal intermediate chain 2
89. SCIN ENSGALG00000010770 883 0.758 - - - - - 0.758 - - - - scinderin [Source:NCBI gene;Acc:420588]
90. MICAL1 ENSGALG00000032190 134 0.756 - - - - - - - - - 0.756 microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:NCBI gene;Acc:429474]
91. ARHGAP40 ENSGALG00000003550 484 0.756 - - - - - - - 0.756 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
92. CNR1 ENSGALG00000037511 38 0.755 - - - - - - - - - 0.755 cannabinoid receptor 1 [Source:NCBI gene;Acc:428633]
93. USP19 ENSGALG00000006824 44 0.754 - - - - - - - - - 0.754 ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
94. COL9A3 ENSGALG00000005628 2842 0.754 - - - - - 0.754 - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
95. SMARCA1 ENSGALG00000008431 4000 0.754 - - - - - - - - - 0.754 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:HGNC Symbol;Acc:HGNC:11097]
96. T ENSGALG00000011489 2619 0.753 - - - - - 0.753 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
97. SPON2 ENSGALG00000038433 1240 0.749 - - - - - 0.749 - - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
98. MALSU1 ENSGALG00000010954 51 0.749 - - - - - - - - - 0.749 mitochondrial assembly of ribosomal large subunit 1 [Source:HGNC Symbol;Acc:HGNC:21721]
99. CHRM2 ENSGALG00000012894 21 0.747 - - - - - - - - - 0.747 cholinergic receptor muscarinic 2 [Source:NCBI gene;Acc:418126]
100. RRAD ENSGALG00000005140 183 0.746 - - - - - 0.746 - - - - RRAD, Ras related glycolysis inhibitor and calcium channel regulator [Source:NCBI gene;Acc:415790]

There are 63 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA