Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SNAI2

Gene Name Gene ID Reads Annotation
SNAI2 ENSGALG00000030902 8201 snail family transcriptional repressor 2











Genes with expression patterns similar to SNAI2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNAI2 ENSGALG00000030902 8201 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 snail family transcriptional repressor 2
2. TGFB2 ENSGALG00000009612 10223 2.287 - - - - - 0.714 0.765 - 0.808 - transforming growth factor beta 2 [Source:NCBI gene;Acc:421352]
3. LEPREL4 LEPREL4 5609 2.204 - - - - - - 0.713 0.783 0.708 -
4. NDUFB3 ENSGALG00000008239 15511 1.681 - - - - - - 0.748 0.933 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
5. PGAM5 ENSGALG00000002137 7700 1.64 - - - - - - 0.735 0.905 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
6. CTSC ENSGALG00000017239 7651 1.64 - - - - - - 0.707 0.933 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
7. FXR1 ENSGALG00000008864 10250 1.619 - - - - - - 0.710 0.909 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
8. PPCS ENSGALG00000004882 5759 1.608 - - - - - - 0.738 0.870 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
9. VCAN ENSGALG00000015624 11489 1.562 - - - - - - - 0.852 - 0.710 versican [Source:NCBI gene;Acc:395565]
10. LIMD1 ENSGALG00000035623 7282 1.543 - - - - - - 0.739 0.804 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
11. DLD ENSGALG00000007931 11011 1.526 - - - - - - 0.706 0.820 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
12. CNOT8 ENSGALG00000003950 8271 1.512 - - - - - - 0.703 0.809 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
13. COL5A2 ENSGALG00000031112 18358 1.508 - - - - - 0.736 0.772 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
14. PPDPF ENSGALG00000005849 16711 1.502 - - - - - - 0.789 0.713 - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
15. HAPLN1 ENSGALG00000015627 14942 1.478 - - - - - - 0.766 - 0.712 - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
16. SPCS3 ENSGALG00000010839 19106 1.44 - - - - - - 0.718 - 0.722 - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
17. CHMP3 ENSGALG00000015805 11581 0.939 - - - - - - - 0.939 - - charged multivesicular body protein 3
18. UBE2D1 ENSGALG00000021213 5876 0.937 - - - - - - - 0.937 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
19. SCO1 ENSGALG00000030475 7304 0.936 - - - - - - - 0.936 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
20. SMDT1 ENSGALG00000011897 9360 0.934 - - - - - - - 0.934 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
21. ERGIC2 ENSGALG00000007183 12870 0.932 - - - - - - - 0.932 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
22. ZNF326 ENSGALG00000006113 15141 0.927 - - - - - - - 0.927 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
23. MRPL18 ENSGALG00000011625 7855 0.927 - - - - - - - 0.927 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
24. NAE1 ENSGALG00000038957 13777 0.927 - - - - - - - 0.927 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
25. BID ENSGALG00000013039 12427 0.926 - - - - - - - 0.926 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
26. AHCTF1 ENSGALG00000010630 4809 0.923 - - - - - - - 0.923 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
27. TSC22D2 ENSGALG00000027591 6594 0.921 - - - - - - - 0.921 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
28. DPYD ENSGALG00000005509 4115 0.919 - - - - - - - 0.919 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
29. MARC1 ENSGALG00000009453 5675 0.917 - - - - - - - 0.917 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
30. CKAP2 ENSGALG00000017025 25020 0.916 - - - - - - - 0.916 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
31. GFPT1 ENSGALG00000036391 14025 0.915 - - - - - - - 0.915 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
32. ENSGALG00000003150 ENSGALG00000003150 10001 0.913 - - - - - - - 0.913 - -
33. NDUFAF1 ENSGALG00000008587 14779 0.913 - - - - - - - 0.913 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
34. BCAP29 ENSGALG00000008009 8519 0.912 - - - - - - - 0.912 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
35. MAPK9 ENSGALG00000039099 5467 0.909 - - - - - - - 0.909 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
36. FBXO33 ENSGALG00000010192 2917 0.908 - - - - - - - 0.908 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
37. MRPS23 ENSGALG00000005559 10360 0.907 - - - - - - - 0.907 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
38. LIG3 ENSGALG00000002288 7198 0.907 - - - - - - - 0.907 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
39. CHMP6 ENSGALG00000026428 18026 0.907 - - - - - - - 0.907 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
40. BCLAF1 ENSGALG00000013935 7596 0.906 - - - - - - - 0.906 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
41. LATS2 4776 0.906 - - - - - - - 0.906 - - large tumor suppressor kinase 2
42. MRPL20 ENSGALG00000001542 28764 0.905 - - - - - - - 0.905 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
43. HNRNPD ENSGALG00000011184 10686 0.902 - - - - - - - 0.902 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
44. SNAP29 ENSGALG00000040128 3581 0.902 - - - - - - - 0.902 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
45. EFTUD2 ENSGALG00000000988 17913 0.899 - - - - - - - 0.899 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
46. NDUFS6 ENSGALG00000013191 15874 0.898 - - - - - - - 0.898 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
47. VGLL4 ENSGALG00000004937 3762 0.896 - - - - - - - 0.896 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
48. MAST2 ENSGALG00000010313 2975 0.896 - - - - - - - 0.896 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
49. SLC35E3 ENSGALG00000009940 8560 0.896 - - - - - - - 0.896 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
50. MTERFD1 MTERFD1 3640 0.895 - - - - - - - 0.895 - -
51. BRCC3 ENSGALG00000005383 4844 0.894 - - - - - - - 0.894 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
52. TRIM24 ENSGALG00000012823 2725 0.894 - - - - - - - 0.894 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
53. TXNDC5 ENSGALG00000012784 4678 0.892 - - - - - - - 0.892 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
54. CAMSAP2 ENSGALG00000002145 6109 0.891 - - - - - - - 0.891 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
55. MBD3 ENSGALG00000001101 37265 0.89 - - - - - - - 0.890 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
56. WASH1 WASH1 3240 0.889 - - - - - - - 0.889 - -
57. BAG3 ENSGALG00000009433 6152 0.889 - - - - - - - 0.889 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
58. NET1 ENSGALG00000008437 9850 0.889 - - - - - - - 0.889 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
59. GTF2A2 ENSGALG00000003793 5957 0.888 - - - - - - - 0.888 - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
60. XPO6 ENSGALG00000035360 7042 0.888 - - - - - - - 0.888 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
61. KDM4A ENSGALG00000010074 7219 0.888 - - - - - - - 0.888 - - lysine demethylase 4A
62. PIGK ENSGALG00000009015 7942 0.885 - - - - - - - 0.885 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
63. TCEA1 ENSGALG00000015274 2706 0.884 - - - - - - - 0.884 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
64. SRP72 ENSGALG00000011403 13666 0.883 - - - - - - - 0.883 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
65. CEP170 ENSGALG00000010733 4177 0.883 - - - - - - - 0.883 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
66. TMEM59 ENSGALG00000010746 4669 0.881 - - - - - - - 0.881 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
67. CDC42BPA ENSGALG00000009158 3926 0.881 - - - - - - - 0.881 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
68. HPCAL1 ENSGALG00000016443 6633 0.881 - - - - - - - 0.881 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
69. RDM1 ENSGALG00000000243 3388 0.881 - - - - - - - 0.881 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
70. ARFRP1 ENSGALG00000006101 3743 0.88 - - - - - - - 0.880 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
71. MED24 ENSGALG00000013506 5403 0.88 - - - - - - - 0.880 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
72. SLC25A1 ENSGALG00000041760 4744 0.878 - - - - - - - 0.878 - - solute carrier family 25 member 1, transcript variant X2
73. CENPH ENSGALG00000014788 10601 0.876 - - - - - - - 0.876 - - centromere protein H [Source:NCBI gene;Acc:395316]
74. NIFK ENSGALG00000011650 14990 0.876 - - - - - - - 0.876 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
75. PEO1 PEO1 6747 0.875 - - - - - - - 0.875 - -
76. CCDC61 ENSGALG00000006714 8066 0.874 - - - - - - - 0.874 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
77. RNF144A ENSGALG00000028709 2855 0.873 - - - - - - - 0.873 - - ring finger protein 144A, transcript variant X1
78. KHDRBS1 ENSGALG00000003272 4249 0.871 - - - - - - - 0.871 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
79. ECHS1 ENSGALG00000024271 9364 0.871 - - - - - - - 0.871 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
80. ATG4C ENSGALG00000010985 6102 0.871 - - - - - - - 0.871 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
81. CPQ ENSGALG00000030866 3962 0.87 - - - - - - - 0.870 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
82. Mar-05 Mar-05 6330 0.87 - - - - - - - 0.870 - -
83. RNF214 ENSGALG00000036993 3729 0.869 - - - - - - - 0.869 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
84. TUBAL3 ENSGALG00000008444 2979 0.869 - - - - - - - 0.869 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
85. DUSP14 ENSGALG00000027641 3662 0.868 - - - - - - - 0.868 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
86. UBAC2 ENSGALG00000016880 1343 0.868 - - - - - - - 0.868 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
87. MLLT10 ENSGALG00000007928 4022 0.866 - - - - - - - 0.866 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
88. CHAF1A ENSGALG00000001126 6506 0.866 - - - - - - - 0.866 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
89. PYCR1 ENSGALG00000007300 7987 0.865 - - - - - - - 0.865 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
90. gga-mir-1772 ENSGALG00000025300 2892 0.863 - - - - - - - 0.863 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
91. EFHD1 ENSGALG00000001428 2831 0.863 - - - - - - - 0.863 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
92. SPG21 ENSGALG00000007262 8050 0.862 - - - - - - - 0.862 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
93. ACSL1 ENSGALG00000010628 2560 0.862 - - - - - - - 0.862 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
94. MRPL51 ENSGALG00000014435 29348 0.86 - - - - - - - 0.860 - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
95. UCK2 ENSGALG00000003510 2512 0.86 - - - - - - - 0.860 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
96. KIAA1551 ENSGALG00000045168 3435 0.86 - - - - - - 0.860 - - - KIAA1551, transcript variant X1
97. STX18 ENSGALG00000015012 1489 0.859 - - - - - - - 0.859 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
98. PWWP2A ENSGALG00000038202 3686 0.859 - - - - - - - 0.859 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
99. SMIM12 ENSGALG00000030261 5860 0.857 - - - - - - - 0.857 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
100. GLG1 ENSGALG00000039818 6221 0.856 - - - - - - - 0.856 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]

There are 276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA