Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SNAI1

Gene Name Gene ID Reads Annotation
SNAI1 ENSGALG00000008018 3930 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]











Genes with expression patterns similar to SNAI1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SNAI1 ENSGALG00000008018 3930 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
2. WDR47 ENSGALG00000002129 2624 1.747 - - - - - - - 0.997 0.750 - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
3. COMMD7 ENSGALG00000006630 11491 1.706 - - - - - - - 0.978 - 0.728 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
4. MTSS1 ENSGALG00000041969 1312 1.694 - - - - - - - - 0.824 0.870 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
5. ASB9 ENSGALG00000016563 2780 1.692 - - - - - - 0.772 - - 0.920 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
6. DCAF7 ENSGALG00000000510 8681 1.686 - - - - - - 0.701 0.985 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
7. FSTL4 ENSGALG00000031487 529 1.682 - - - - - - - - 0.792 0.890 follistatin like 4 [Source:NCBI gene;Acc:395163]
8. PCLO 249 1.661 - - - - - - - - 0.804 0.857 piccolo presynaptic cytomatrix protein
9. GGA.31975 GGA.31975 8825 1.66 - - - - - - - 0.862 - 0.798
10. FASTKD3 ENSGALG00000033521 1186 1.651 - - - - - - - - 0.792 0.859 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
11. RIN2 ENSGALG00000008457 2661 1.645 - - - - - - - - 0.835 0.810 Ras and Rab interactor 2 [Source:HGNC Symbol;Acc:HGNC:18750]
12. GTF3C1 ENSGALG00000007387 5788 1.626 - - - - - - - - 0.809 0.817 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
13. ATP6V0A1 ENSGALG00000003256 4408 1.618 - - - - - - - - 0.772 0.846 ATPase H+ transporting V0 subunit a1 [Source:NCBI gene;Acc:395474]
14. WTAP ENSGALG00000011660 10811 1.608 - - - - - - - 0.848 0.760 - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
15. CIB1 ENSGALG00000008302 13946 1.591 - - - - - - - 0.814 - 0.777 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
16. COL5A2 ENSGALG00000031112 18358 1.576 - - - - - - 0.739 - - 0.837 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
17. CLIC4 ENSGALG00000001262 11497 1.571 - - - - - - 0.773 - - 0.798 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
18. SLC39A13 ENSGALG00000008122 2003 1.569 - - - - - - - - 0.721 0.848 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
19. ENSGALG00000009044 ENSGALG00000009044 14492 1.554 - - - - - - - 0.714 - 0.840
20. ALMS1 ENSGALG00000044620 570 1.548 - - - - - - - - 0.814 0.734 ALMS1, centrosome and basal body associated protein, transcript variant X1
21. RBBP8 ENSGALG00000014982 3255 1.547 - - - - - - - - 0.842 0.705 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
22. RAMP2 ENSGALG00000024449 5860 1.547 - - - - - - 0.724 - - 0.823 receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
23. MRPL24 ENSGALG00000030994 24264 1.538 - - - - - - 0.709 0.829 - - mitochondrial ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:14037]
24. SNRNP48 ENSGALG00000013005 1468 1.522 - - - - - - - - 0.738 0.784 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
25. IQGAP1 ENSGALG00000030162 1047 1.519 - - - - - - - - 0.742 0.777 IQ motif containing GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:6110]
26. HDHD1 HDHD1 2928 1.516 - - - - - - - 0.743 - 0.773
27. AAMP ENSGALG00000011445 2528 1.504 - - - - - - 0.714 - 0.790 - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
28. ARPC2 ENSGALG00000011452 7338 1.503 - - - - - - 0.701 - 0.802 - actin related protein 2/3 complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:705]
29. FANCB ENSGALG00000016569 1193 1.497 - - - - - - - - 0.756 0.741 FA complementation group B [Source:NCBI gene;Acc:418628]
30. CHRAC1 ENSGALG00000040823 5695 1.487 - - - - - - 0.734 - - 0.753 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
31. VWF ENSGALG00000017272 1012 1.455 - - - - - - - - 0.755 0.700 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
32. CHMP5 ENSGALG00000013160 13347 1.452 - - - - - - 0.724 - - 0.728 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
33. MRPS30 ENSGALG00000014874 3416 1.435 - - - - - - 0.715 - 0.720 - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
34. NOC4L ENSGALG00000002272 9644 1.423 - - - - - - 0.713 - - 0.710 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
35. RGMA ENSGALG00000039173 12874 0.999 - - - - - - - 0.999 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
36. USP3 ENSGALG00000003427 1236 0.997 - - - - - - - 0.997 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
37. DARS ENSGALG00000012355 2887 0.997 - - - - - - - 0.997 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
38. SLC43A3 ENSGALG00000020479 1332 0.997 - - - - - - - 0.997 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
39. OLFM1 ENSGALG00000002515 1841 0.997 - - - - - - - 0.997 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
40. DERL3 ENSGALG00000005994 1499 0.997 - - - - - - - 0.997 - - derlin 3 [Source:NCBI gene;Acc:416934]
41. FAM114A1 ENSGALG00000013583 736 0.997 - - - - - - - 0.997 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
42. C10orf76 C10orf76 2424 0.997 - - - - - - - 0.997 - -
43. TOLLIP ENSGALG00000006697 917 0.997 - - - - - - - 0.997 - - toll interacting protein [Source:NCBI gene;Acc:423099]
44. TMEFF1 ENSGALG00000013212 4222 0.997 - - - - - - - 0.997 - - transmembrane protein with EGF-like and two follistatin-like domains 1
45. DACH1 ENSGALG00000037015 5648 0.997 - - - - - - - 0.997 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
46. ACTR10 ENSGALG00000012041 2752 0.997 - - - - - - - 0.997 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
47. ACL ACL 1813 0.997 - - - - - - - 0.997 - -
48. UBQLN1 ENSGALG00000012585 5158 0.997 - - - - - - - 0.997 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
49. NUDCD1 ENSGALG00000040879 2965 0.997 - - - - - - - 0.997 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
50. RRAGD ENSGALG00000026971 2429 0.997 - - - - - - - 0.997 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
51. CUTC ENSGALG00000037283 2530 0.997 - - - - - - - 0.997 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
52. CDC123 ENSGALG00000014038 1418 0.997 - - - - - - - 0.997 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
53. SOCS5 ENSGALG00000010016 1134 0.996 - - - - - - - 0.996 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
54. RFWD3 2315 0.996 - - - - - - - 0.996 - - ring finger and WD repeat domain 3
55. PYURF ENSGALG00000039869 5657 0.996 - - - - - - - 0.996 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
56. DIP2C ENSGALG00000006652 1858 0.996 - - - - - - - 0.996 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
57. ENSGALG00000004643 ENSGALG00000004643 2297 0.996 - - - - - - - 0.996 - -
58. PHF12 ENSGALG00000031368 1960 0.996 - - - - - - - 0.996 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
59. HIC2 ENSGALG00000033416 4051 0.996 - - - - - - - 0.996 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
60. TTC39A ENSGALG00000010540 1025 0.996 - - - - - - - 0.996 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
61. C3H6ORF120 C3H6ORF120 2712 0.996 - - - - - - - 0.996 - -
62. LYPLA2 ENSGALG00000004002 3939 0.996 - - - - - - - 0.996 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
63. PI4KA ENSGALG00000040756 3973 0.996 - - - - - - - 0.996 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
64. MFN1 ENSGALG00000041873 4170 0.995 - - - - - - - 0.995 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
65. TRNT1 ENSGALG00000017368 11932 0.995 - - - - - - - 0.995 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
66. SDAD1 ENSGALG00000011543 5191 0.994 - - - - - - - 0.994 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
67. RP2 ENSGALG00000016728 3291 0.994 - - - - - - - 0.994 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
68. NDUFAF2 ENSGALG00000027564 7302 0.994 - - - - - - - 0.994 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
69. HCFC2 ENSGALG00000029616 4525 0.993 - - - - - - - 0.993 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
70. DTD2 ENSGALG00000009978 4322 0.992 - - - - - - - 0.992 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
71. LONP1 ENSGALG00000040492 7133 0.992 - - - - - - - 0.992 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
72. SYNE2 ENSGALG00000011811 5542 0.99 - - - - - - - 0.990 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
73. ZNF639 ENSGALG00000005944 6387 0.989 - - - - - - - 0.989 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
74. TP53INP1 ENSGALG00000041353 6890 0.989 - - - - - - - 0.989 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
75. NABP1 ENSGALG00000025884 4195 0.989 - - - - - - - 0.989 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
76. PITX3 ENSGALG00000005613 1518 0.988 - - - - - - - 0.988 - - paired like homeodomain 3
77. ZC3H6 ENSGALG00000008269 10353 0.988 - - - - - - - 0.988 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
78. DYRK2 ENSGALG00000009901 3141 0.987 - - - - - - - 0.987 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
79. ST5 6869 0.985 - - - - - - - 0.985 - - suppression of tumorigenicity 5, transcript variant X1
80. MICU3 ENSGALG00000013661 1466 0.983 - - - - - - - 0.983 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
81. PPP3CB ENSGALG00000005243 8794 0.983 - - - - - - - 0.983 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
82. PDZD11 ENSGALG00000004198 11484 0.982 - - - - - - - 0.982 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
83. USP9X ENSGALG00000016236 9419 0.981 - - - - - - - 0.981 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
84. HAPLN1 ENSGALG00000015627 14942 0.98 - - - - - - - 0.980 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
85. ABL ABL 9532 0.978 - - - - - - - 0.978 - -
86. DHFR ENSGALG00000026757 18478 0.976 - - - - - - - 0.976 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
87. GALNT1 ENSGALG00000013135 13583 0.976 - - - - - - - 0.976 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
88. TFIP11 ENSGALG00000005623 7784 0.971 - - - - - - - 0.971 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
89. SAMHD1 ENSGALG00000001231 5218 0.968 - - - - - - - 0.968 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
90. RGL1 ENSGALG00000004728 3004 0.963 - - - - - - - 0.963 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
91. TMEM120B ENSGALG00000004254 2819 0.962 - - - - - - - 0.962 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
92. APAF1 ENSGALG00000011531 3102 0.957 - - - - - - - 0.957 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
93. PPP2R5C ENSGALG00000029996 5759 0.955 - - - - - - - 0.955 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
94. GPATCH1 ENSGALG00000004839 6455 0.953 - - - - - - - 0.953 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
95. GPS1 ENSGALG00000002827 8433 0.95 - - - - - - - 0.950 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
96. COG7 ENSGALG00000006156 4072 0.943 - - - - - - - 0.943 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
97. CIAPIN1 ENSGALG00000029268 23036 0.933 - - - - - - - 0.933 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
98. RPF1 ENSGALG00000008796 9809 0.929 - - - - - - - 0.929 - - ribosome production factor 1 homolog
99. PKP2 ENSGALG00000012913 2547 0.927 - - - - - - - 0.927 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
100. MT-ND4L MT-ND4L 12537 0.912 - - - - - - - 0.912 - -

There are 677 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA