Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SMYD4

Gene Name Gene ID Reads Annotation
SMYD4 ENSGALG00000003031 2362 SET and MYND domain containing 4 [Source:NCBI gene;Acc:417562]











Genes with expression patterns similar to SMYD4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMYD4 ENSGALG00000003031 2362 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET and MYND domain containing 4 [Source:NCBI gene;Acc:417562]
2. NARFL ENSGALG00000005365 2668 1.574 - - - - - - 0.859 0.715 - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
3. CASP6 ENSGALG00000012186 6639 1.574 - - - - - - 0.870 0.704 - - caspase 6 [Source:NCBI gene;Acc:395477]
4. SRSF11 ENSGALG00000011305 10435 1.565 - - - - - - 0.857 0.708 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
5. ALG8 ENSGALG00000019042 3636 1.528 - - - - - - - 0.799 0.729 - ALG8, alpha-1,3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:23161]
6. QRICH1 ENSGALG00000006867 2031 0.962 - - - - - - 0.962 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
7. OSBPL1A ENSGALG00000015086 2702 0.938 - - - - - - 0.938 - - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
8. OSBPL8 ENSGALG00000010246 4565 0.938 - - - - - - 0.938 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
9. EPB41L1 ENSGALG00000034171 3616 0.935 - - - - - - 0.935 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
10. TUFT1 ENSGALG00000032955 1317 0.932 - - - - - - 0.932 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
11. NAPEPLD ENSGALG00000008285 1295 0.931 - - - - - - 0.931 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
12. TMEM129 ENSGALG00000015710 1519 0.931 - - - - - - 0.931 - - - transmembrane protein 129 [Source:NCBI gene;Acc:422900]
13. RFFL ENSGALG00000002225 928 0.931 - - - - - - 0.931 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
14. IWS1 ENSGALG00000001803 2305 0.927 - - - - - - 0.927 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
15. SUMF1 ENSGALG00000008286 941 0.926 - - - - - - 0.926 - - - sulfatase modifying factor 1 [Source:HGNC Symbol;Acc:HGNC:20376]
16. GNE ENSGALG00000015331 1577 0.925 - - - - - - 0.925 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
17. MPPE1 ENSGALG00000013794 988 0.925 - - - - - - 0.925 - - - metallophosphoesterase 1 [Source:NCBI gene;Acc:421031]
18. DDX42 ENSGALG00000000581 8780 0.924 - - - - - - 0.924 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
19. GLTPD1 GLTPD1 2968 0.923 - - - - - - 0.923 - - -
20. C11H19ORF12 C11H19ORF12 5149 0.923 - - - - - - 0.923 - - -
21. AP1S3 ENSGALG00000005171 2981 0.923 - - - - - - 0.923 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
22. GADD45 GADD45 8780 0.92 - - - - - - 0.920 - - -
23. ZDHHC13 ENSGALG00000004085 1802 0.92 - - - - - - 0.920 - - - zinc finger DHHC-type containing 13 [Source:NCBI gene;Acc:422980]
24. SLC25A48 ENSGALG00000006341 2606 0.919 - - - - - - 0.919 - - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
25. MRM1 ENSGALG00000039523 2009 0.917 - - - - - - 0.917 - - - mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
26. FAM53A ENSGALG00000015713 3795 0.917 - - - - - - 0.917 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
27. C9orf85 ENSGALG00000026001 4110 0.917 - - - - - - 0.917 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
28. RAD17 ENSGALG00000015571 1374 0.917 - - - - - - 0.917 - - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
29. ANXA11 ENSGALG00000043826 5189 0.916 - - - - - - 0.916 - - - annexin A11 [Source:NCBI gene;Acc:423637]
30. SDK1 ENSGALG00000004420 571 0.915 - - - - - - 0.915 - - - sidekick cell adhesion molecule 1 [Source:NCBI gene;Acc:373894]
31. PIGL ENSGALG00000004492 669 0.915 - - - - - - 0.915 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
32. CLK3 ENSGALG00000001362 2171 0.913 - - - - - - 0.913 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
33. ZBTB26 ENSGALG00000042762 1920 0.913 - - - - - - 0.913 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
34. ABHD13 ENSGALG00000016853 4975 0.911 - - - - - - 0.911 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
35. TMEM14A ENSGALG00000019894 5279 0.91 - - - - - - 0.910 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
36. REXO4 ENSGALG00000030609 2926 0.91 - - - - - - 0.910 - - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
37. FITM2 ENSGALG00000026285 1855 0.909 - - - - - - 0.909 - - - fat storage inducing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16135]
38. ANGPTL2 ENSGALG00000000927 2580 0.909 - - - - - - 0.909 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
39. ZNF830 ENSGALG00000013156 3896 0.908 - - - - - - 0.908 - - - zinc finger protein 830
40. FDFT1 ENSGALG00000016665 3053 0.908 - - - - - - 0.908 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
41. RHOT2 ENSGALG00000002497 1744 0.907 - - - - - - 0.907 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
42. ARHGEF3 ENSGALG00000005481 683 0.907 - - - - - - 0.907 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
43. ASTN2 ENSGALG00000007038 1748 0.907 - - - - - - 0.907 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
44. TTI1 ENSGALG00000006791 1218 0.907 - - - - - - 0.907 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
45. C12orf66 ENSGALG00000027682 2110 0.906 - - - - - - 0.906 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
46. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.906 - - - - - - 0.906 - - - pseudouridylate synthase-like 1, transcript variant X8
47. EFNB1 ENSGALG00000036539 2706 0.906 - - - - - - 0.906 - - - ephrin B1 [Source:NCBI gene;Acc:395896]
48. ETV5 ENSGALG00000005768 9679 0.906 - - - - - - 0.906 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
49. TIRAP ENSGALG00000040224 2578 0.905 - - - - - - 0.905 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
50. CRELD2 ENSGALG00000008551 2084 0.905 - - - - - - 0.905 - - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
51. RAD51A RAD51A 2132 0.903 - - - - - - 0.903 - - -
52. QSER1 ENSGALG00000012030 4490 0.902 - - - - - - 0.902 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
53. FXYD6 ENSGALG00000025937 4073 0.902 - - - - - - 0.902 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
54. COL22A1 ENSGALG00000038022 544 0.902 - - - - - - 0.902 - - - collagen type XXII alpha 1 chain [Source:NCBI gene;Acc:420315]
55. SLAIN2 ENSGALG00000014115 1292 0.902 - - - - - - 0.902 - - - SLAIN motif family member 2 [Source:HGNC Symbol;Acc:HGNC:29282]
56. BTBD7 4136 0.901 - - - - - - 0.901 - - - BTB domain containing 7, transcript variant X2
57. LRR1 ENSGALG00000012230 1062 0.901 - - - - - - 0.901 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
58. LPXN 133 0.901 - - - - - - 0.901 - - - leupaxin, transcript variant X4
59. BAG4 ENSGALG00000003254 5751 0.901 - - - - - - 0.901 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
60. BUD13_1 ENSGALG00000025882 1118 0.9 - - - - - - 0.900 - - - BUD13 homolog [Source:NCBI gene;Acc:428248]
61. CTGF ENSGALG00000037402 1557 0.899 - - - - - - 0.899 - - - connective tissue growth factor [Source:NCBI gene;Acc:374135]
62. TP53BP1 ENSGALG00000042201 708 0.899 - - - - - - 0.899 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
63. CLN6 ENSGALG00000007981 5656 0.899 - - - - - - 0.899 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
64. PTDSS2 ENSGALG00000004300 682 0.898 - - - - - - 0.898 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
65. PIGF ENSGALG00000020057 201 0.898 - - - - - - 0.898 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
66. C7orf55 C7orf55 7083 0.897 - - - - - - 0.897 - - -
67. SRA1 ENSGALG00000040453 266 0.897 - - - - - - 0.897 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
68. DTX2 ENSGALG00000001905 1475 0.897 - - - - - - 0.897 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
69. KLF11 ENSGALG00000016440 65 0.897 - - - - - - 0.897 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
70. C7orf63 C7orf63 147 0.896 - - - - - - 0.896 - - -
71. BCAR3 358 0.895 - - - - - - 0.895 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
72. YWHAQ ENSGALG00000016433 3450 0.894 - - - - - - 0.894 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
73. PWP1 ENSGALG00000012631 10536 0.893 - - - - - - 0.893 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
74. COG4 ENSGALG00000002603 4485 0.893 - - - - - - 0.893 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
75. GNMT ENSGALG00000043290 3288 0.892 - - - - - - 0.892 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
76. PRDM10 632 0.892 - - - - - - 0.892 - - - PR domain 10, transcript variant X10
77. BBS4 ENSGALG00000001798 667 0.892 - - - - - - 0.892 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
78. ACTR10 ENSGALG00000012041 2752 0.891 - - - - - - 0.891 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
79. SLC28A3 ENSGALG00000012593 131 0.891 - - - - - - 0.891 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
80. CLASP1 ENSGALG00000011645 1378 0.89 - - - - - - 0.890 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
81. MYH15 ENSGALG00000015358 6304 0.89 - - - - - - 0.890 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
82. HYAL1 ENSGALG00000000785 1778 0.889 - - - - - - 0.889 - - - hyaluronoglucosaminidase 1, transcript variant X3
83. ZER1 ENSGALG00000004659 1635 0.888 - - - - - - 0.888 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
84. LYRM4 ENSGALG00000027339 2917 0.888 - - - - - - 0.888 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
85. ESCO1 ENSGALG00000014936 739 0.888 - - - - - - 0.888 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
86. EML1 1941 0.888 - - - - - - 0.888 - - - echinoderm microtubule associated protein like 1, transcript variant X11
87. PYCR1 ENSGALG00000007300 7987 0.887 - - - - - - 0.887 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
88. THOC3 ENSGALG00000024172 7617 0.887 - - - - - - 0.887 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
89. TRDMT1 ENSGALG00000008686 2663 0.885 - - - - - - 0.885 - - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
90. WHSC1 1712 0.884 - - - - - - 0.884 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
91. RNF113A ENSGALG00000000538 3985 0.884 - - - - - - 0.884 - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
92. TNFRSF11B ENSGALG00000043167 911 0.884 - - - - - - 0.884 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
93. CINP ENSGALG00000011372 2366 0.882 - - - - - - 0.882 - - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
94. FAM86A FAM86A 1860 0.882 - - - - - - 0.882 - - -
95. MYEOV2 MYEOV2 5155 0.881 - - - - - - 0.881 - - -
96. COL17A1 ENSGALG00000029617 167 0.88 - - - - - - 0.880 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
97. SEL1L3 ENSGALG00000039549 1400 0.88 - - - - - - 0.880 - - - SEL1L family member 3 [Source:HGNC Symbol;Acc:HGNC:29108]
98. CDC16 ENSGALG00000016816 2162 0.88 - - - - - - 0.880 - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
99. SLAIN1 ENSGALG00000016913 461 0.88 - - - - - - 0.880 - - - SLAIN motif family member 1 [Source:HGNC Symbol;Acc:HGNC:26387]
100. USP5 ENSGALG00000014525 21883 0.879 - - - - - - 0.879 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]

There are 199 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA