Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMYD3

Gene Name Gene ID Reads Annotation
SMYD3 ENSGALG00000010653 14 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]











Genes with expression patterns similar to SMYD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMYD3 ENSGALG00000010653 14 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 SET and MYND domain containing 3 [Source:HGNC Symbol;Acc:HGNC:15513]
2. CLDN3 ENSGALG00000022557 189 2 - - - 1.000 - - - 1.000 - - claudin 3 [Source:NCBI gene;Acc:374029]
3. RNF25 ENSGALG00000011375 51 1.79 - - - - 0.855 - - 0.935 - - ring finger protein 25 [Source:NCBI gene;Acc:424211]
4. CCKBR ENSGALG00000039837 23 1.763 - - - - - 0.763 - 1.000 - - cholecystokinin B receptor [Source:NCBI gene;Acc:414885]
5. ENSGALG00000005026 ENSGALG00000005026 9 1.763 - - - - 1.000 0.763 - - - -
6. ENSGALG00000028707 ENSGALG00000028707 9 1.751 - - - 1.000 - 0.751 - - - -
7. EPHA1 ENSGALG00000014687 174 1.746 - - - - - 0.746 - - - 1.000 EPH receptor A1 [Source:NCBI gene;Acc:378782]
8. EDRF1 26 1.725 - - - - - 0.725 - 1.000 - - erythroid differentiation regulatory factor 1
9. SEMA6B ENSGALG00000001171 73 1.701 - - - 1.000 - - - 0.701 - - Gallus gallus semaphorin 6B (SEMA6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001319026]
10. LOC422147 ENSGALG00000004113 30 1.695 - - - - 0.931 - - 0.764 - - putative P2Y purinoceptor 10-like
11. CAPN8 ENSGALG00000009382 8 1.593 - - 0.846 - - 0.747 - - - - calpain 8 [Source:HGNC Symbol;Acc:HGNC:1485]
12. PI4KB ENSGALG00000024034 31 1.581 - - 0.796 - 0.785 - - - - - phosphatidylinositol 4-kinase beta [Source:HGNC Symbol;Acc:HGNC:8984]
13. KIAA1407 KIAA1407 252 1.499 - - - - - 0.736 - - - 0.763
14. ENSGALG00000026461 ENSGALG00000026461 61 1.465 - - - - - - 0.727 0.738 - -
15. BST1 ENSGALG00000014509 12 1 - - - - - - - 1.000 - - bone marrow stromal cell antigen 1 [Source:NCBI gene;Acc:422828]
16. GPR34 ENSGALG00000016227 9 1 - - - - - - - 1.000 - - G protein-coupled receptor 34 [Source:NCBI gene;Acc:771199]
17. TSKU ENSGALG00000000761 10 1 - - - - 1.000 - - - - - tsukushi, small leucine rich proteoglycan [Source:NCBI gene;Acc:419088]
18. ENSGALG00000026109 ENSGALG00000026109 2 1 - - - 1.000 - - - - - -
19. CD8B ENSGALG00000015902 3 1 - - - - - - - 1.000 - - CD8b molecule [Source:NCBI gene;Acc:396175]
20. PEPCK PEPCK 1 1 - - - - - - - 1.000 - -
21. C1ORF95 C1ORF95 0 1 - - - - - - - 1.000 - -
22. GABRA6 ENSGALG00000001695 3 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha6 subunit [Source:NCBI gene;Acc:395931]
23. TPO ENSGALG00000016370 98 1 - - - 1.000 - - - - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
24. FAM73A FAM73A 7 1 - - - - - - - 1.000 - -
25. KIAA1841 ENSGALG00000007825 22 1 - - - - - - - 1.000 - - KIAA1841 [Source:NCBI gene;Acc:421196]
26. GRHL2 ENSGALG00000037687 3 1 - - - - - - - 1.000 - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
27. LOC425001 ENSGALG00000009468 7 1 - - - - - - - 1.000 - - uncharacterized LOC425001, transcript variant X2
28. GNPTG ENSGALG00000006441 50 1 - - - - 1.000 - - - - - N-acetylglucosamine-1-phosphate transferase gamma subunit [Source:NCBI gene;Acc:416591]
29. FREM1 ENSGALG00000005426 61 1 - - - - - - - 1.000 - - FRAS1 related extracellular matrix 1 [Source:HGNC Symbol;Acc:HGNC:23399]
30. ABCA12 ENSGALG00000003553 9 1 - - - 1.000 - - - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
31. TTC39B ENSGALG00000005416 12 1 - - - - - - - 1.000 - - tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]
32. TBXAS1 ENSGALG00000012791 2 1 - - - - - - - 1.000 - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
33. SKIV2L ENSGALG00000035499 45 1 - - - - - - - 1.000 - - Ski2 like RNA helicase [Source:HGNC Symbol;Acc:HGNC:10898]
34. SLC35F4 ENSGALG00000012094 30 1 - - - - - - - 1.000 - - solute carrier family 35 member F4 [Source:HGNC Symbol;Acc:HGNC:19845]
35. MADCAM1 ENSGALG00000028341 6 1 - - - - - - - 1.000 - - mucosal vascular addressin cell adhesion molecule 1
36. ANO2 ENSGALG00000017271 4 1 - - - - - - - 1.000 - - anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]
37. ZDHHC1 ENSGALG00000002091 3 1 - - - 1.000 - - - - - - zinc finger DHHC-type containing 1 [Source:HGNC Symbol;Acc:HGNC:17916]
38. SEZ6L ENSGALG00000032415 56 1 - - - - - - - 1.000 - - seizure related 6 homolog like [Source:HGNC Symbol;Acc:HGNC:10763]
39. LEPR ENSGALG00000011058 4 1 - - - 1.000 - - - - - - leptin receptor [Source:NCBI gene;Acc:374223]
40. KCNJ3 ENSGALG00000012537 6 1 - - - 1.000 - - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
41. TRAPPC9 ENSGALG00000042766 10 1 - - - - - - - 1.000 - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
42. PSD ENSGALG00000042551 6 1 - - - - 1.000 - - - - - pleckstrin and Sec7 domain containing [Source:HGNC Symbol;Acc:HGNC:9507]
43. ICK ENSGALG00000016321 19 1 - - - - - - - 1.000 - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
44. CASKIN2 ENSGALG00000008034 3 1 - - - - - - - 1.000 - - CASK interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:18200]
45. ATXN3 ENSGALG00000010766 48 1 - - - - 1.000 - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
46. CTSE ENSGALG00000000786 1 1 - - - - - - - 1.000 - - cathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]
47. PKHD1 ENSGALG00000042136 8 1 - - - 1.000 - - - - - - PKHD1, fibrocystin/polyductin [Source:HGNC Symbol;Acc:HGNC:9016]
48. B-G B-G 2 1 - - - 1.000 - - - - - -
49. CFH ENSGALG00000002431 31 1 - - - 1.000 - - - - - - complement factor H, transcript variant X1
50. LRRC9 2 1 - - - 1.000 - - - - - - leucine rich repeat containing 9
51. TPCN2 ENSGALG00000007550 10 1 - - - 1.000 - - - - - - two pore segment channel 2 [Source:HGNC Symbol;Acc:HGNC:20820]
52. ANPEP ENSGALG00000027501 234 1 - - - - - - - 1.000 - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
53. DIRAS2 ENSGALG00000005323 11 1 - - - - 1.000 - - - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
54. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 1 - - - 1.000 - - - - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
55. MAP3K15 ENSGALG00000016426 1 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 15 [Source:HGNC Symbol;Acc:HGNC:31689]
56. GABRG1 ENSGALG00000020143 5 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
57. TMEM213 ENSGALG00000026974 3 1 - - - - 1.000 - - - - - transmembrane protein 213 [Source:HGNC Symbol;Acc:HGNC:27220]
58. LOC422308 ENSGALG00000007546 7 1 - - - - 1.000 - - - - - exocyst complex component 1-like
59. COL28A1 ENSGALG00000010259 0 1 - - - 1.000 - - - - - - collagen type XXVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22442]
60. KIAA1024L ENSGALG00000027692 20 1 - - - - - - - 1.000 - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
61. MTHFD2L ENSGALG00000010855 14 1 - - - - - - - 1.000 - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
62. ZBTB44 ENSGALG00000001341 3 1 - - - - 1.000 - - - - - zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
63. AMBP ENSGALG00000030255 18 1 - - - - - - - 1.000 - - alpha-1-microglobulin/bikunin precursor [Source:NCBI gene;Acc:770795]
64. STON1 ENSGALG00000009092 49 1 - - - - - - - 1.000 - - stonin 1 [Source:NCBI gene;Acc:100534590]
65. CRYBG3 7 1 - - - - - - - 1.000 - - crystallin beta-gamma domain containing 3, transcript variant X2
66. TRPM8 ENSGALG00000004116 2 1 - - - 1.000 - - - - - - transient receptor potential cation channel subfamily M member 8 [Source:NCBI gene;Acc:424025]
67. METTL21C ENSGALG00000016864 0 1 - - - 1.000 - - - - - - methyltransferase like 21C [Source:HGNC Symbol;Acc:HGNC:33717]
68. MAML2 ENSGALG00000017199 13 1 - - - - 1.000 - - - - - mastermind like transcriptional coactivator 2 [Source:HGNC Symbol;Acc:HGNC:16259]
69. IL5RA ENSGALG00000008267 7 1 - - - 1.000 - - - - - - interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
70. C1orf43 C1orf43 100 1 - - - - - - - 1.000 - -
71. CACNA1D ENSGALG00000005332 34 1 - - - - - - - 1.000 - - calcium voltage-gated channel subunit alpha1 D [Source:NCBI gene;Acc:395895]
72. OTX2 ENSGALG00000034889 8 1 - - - - 1.000 - - - - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
73. KCNK10 ENSGALG00000010598 7 1 - - - 1.000 - - - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
74. MCF2L2 ENSGALG00000008744 8 1 - - - - - - - 1.000 - - MCF.2 cell line derived transforming sequence-like 2 [Source:HGNC Symbol;Acc:HGNC:30319]
75. PLEK ENSGALG00000008756 1 1 - - - 1.000 - - - - - - pleckstrin [Source:NCBI gene;Acc:395669]
76. CCDC33 7 1 - - - 1.000 - - - - - - coiled-coil domain containing 33, transcript variant X2
77. FAM237A ENSGALG00000020836 21 1 - - - - - - - 1.000 - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
78. SH3BP5 ENSGALG00000039337 17 1 - - - 1.000 - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
79. SERHL2 ENSGALG00000011867 2 1 - - - - - - - 1.000 - - serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
80. DLX1 ENSGALG00000018439 16 1 - - - 1.000 - - - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
81. PAQR7 ENSGALG00000009680 10 1 - - - - - - - 1.000 - - progestin and adipoQ receptor family member 7 [Source:NCBI gene;Acc:425505]
82. PRPF19 ENSGALG00000040048 168 1 - - - - - - - 1.000 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
83. RHOC ENSGALG00000001569 53 1 - - - - 1.000 - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
84. ABCA9 ENSGALG00000021395 5 1 - - - - - - - 1.000 - - ATP binding cassette subfamily A member 9
85. ENSGALG00000023409 ENSGALG00000023409 0 1 - - - 1.000 - - - - - -
86. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - 1.000 - - - - - -
87. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 1 - - - - - - - 1.000 - - cadherin related 23, transcript variant X17
88. PRKG2 ENSGALG00000010909 1 1 - - - - - - - 1.000 - - protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]
89. FES ENSGALG00000008340 223 1 - - - - - - - 1.000 - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
90. ZAP70 ENSGALG00000001486 2 1 - - - - - - - 1.000 - - Gallus gallus zeta-chain (TCR) associated protein kinase 70kDa (ZAP70), mRNA. [Source:RefSeq mRNA;Acc:NM_001321556]
91. BARL ENSGALG00000002170 4 1 - - - 1.000 - - - - - - bile acid receptor-like, transcript variant X2
92. DUSP13L ENSGALG00000005007 3 1 - - - - 1.000 - - - - - dual specificity protein phosphatase 13 isoform MDSP-like
93. FAM173B ENSGALG00000013043 4 1 - - - 1.000 - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
94. LECT2 ENSGALG00000006323 60 1 - - - - - - - 1.000 - - leukocyte cell derived chemotaxin 2 [Source:NCBI gene;Acc:396471]
95. CALN1 ENSGALG00000001122 0 1 - - - 1.000 - - - - - - calneuron 1 [Source:HGNC Symbol;Acc:HGNC:13248]
96. GNRH1 9 1 - - - - - - - 1.000 - - gonadotropin releasing hormone 1
97. SVOP ENSGALG00000034278 27 1 - - - - - - - 1.000 - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
98. MDGA1 ENSGALG00000010145 13 1 - - - - - - - 1.000 - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
99. MC5R ENSGALG00000032087 2 1 - - - - - - - 1.000 - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
100. WDR17 ENSGALG00000043106 4 1 - - - 1.000 - - - - - - WD repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:16661]

There are 285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA